Polyodon spathula (Mississippi paddlefish): 121316122
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Entry
121316122 CDS
T07273
Symbol
rab1ab
Name
(RefSeq) RAB1A, member RAS oncogene family b
KO
K07874
Ras-related protein Rab-1A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121316122 (rab1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121316122 (rab1ab)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121316122 (rab1ab)
04031 GTP-binding proteins [BR:
pspa04031
]
121316122 (rab1ab)
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
121316122 (rab1ab)
Autophagy
Other autophagy associated proteins
121316122 (rab1ab)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121316122 (rab1ab)
Exosomal proteins of other body fluids (saliva and urine)
121316122 (rab1ab)
Exosomal proteins of colorectal cancer cells
121316122 (rab1ab)
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
121316122 (rab1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
SRPRB
FeoB_N
AAA
AAA_7
ABC_tran
PduV-EutP
AAA_16
AAA_29
LANC_like
Septin
AAA_22
AAA_5
CRAL_TRIO_2
TniB
Motif
Other DBs
NCBI-GeneID:
121316122
NCBI-ProteinID:
XP_041106841
LinkDB
All DBs
Position
5:61133758..61150215
Genome browser
AA seq
205 aa
AA seq
DB search
MSTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA
TAGGSEKSNVKIQSTPVKPSSGGCC
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaatgaatcccgaatatgattatttattcaagctgcttctgattggtgactcc
ggtgtggggaaatcgtgcctcctccttcggtttgcagatgatacatacacagaaagttac
attagcacaattggtgtggactttaaaataagaactatagaattagatggaaagacgatc
aaacttcaaatttgggacacagcagggcaggaaaggttccgaacgatcacatccagttac
tacagaggagcacatggcattatagttgtttatgatgttacagaccaagagtctttcaac
aatgttaagcagtggctacaggagattgaccgttacgccagtgaaaatgttaacaagtta
ttggtagggaacaaatgtgacctaactacaaagaaggttgtggactacacaacggcaaag
gaatttgcagactctctcggaattccatttttggaaaccagtgctaagaatgcaacaaat
gtagaacaagccttcatgacaatggctgcagagattaaaaaacgaatgggcccaggagct
acagctggtggatcagagaagtccaatgttaaaatccaaagcactccagtcaagccatct
tctggaggctgctgctaa
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integrated database retrieval system
