Polyodon spathula (Mississippi paddlefish): 121316138
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Entry
121316138 CDS
T07273
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03008
Ribosome biogenesis in eukaryotes
pspa03013
Nucleocytoplasmic transport
pspa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121316138
03008 Ribosome biogenesis in eukaryotes
121316138
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121316138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121316138
03009 Ribosome biogenesis [BR:
pspa03009
]
121316138
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121316138
03036 Chromosome and associated proteins [BR:
pspa03036
]
121316138
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121316138
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121316138
Pre-60S particles
121316138
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121316138
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121316138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
Hydrolase_3
BspA_v
Motif
Other DBs
NCBI-GeneID:
121316138
NCBI-ProteinID:
XP_041106887
LinkDB
All DBs
Position
5:61973557..62005586
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAARQLLDFSQKLDINLLDSVVNCLYHGEGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDATNV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLVEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKGRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDSQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILTYMFNLVEEGKINA
ALNPANPVNNQMFIQEYVANLLKSAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEERESSLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagcagaccatgcagctcgtcagctgctggacttcagc
cagaaactggatatcaacctactagacagtgtggtgaactgtttgtaccatggtgaaggt
ccacagcaaagaatggcgcaggaggtgttgactcatttgaaagaacatccagatgcttgg
acgagagtcgacaccattttggagttttcccagaatatgaacaccaaatactatgcactg
caaatcttggaaacggttataaaaacgagatggaagattcttcccagaaatcagtgtgaa
ggaataaaaaaatacgttgttggtttgattatcaagacttcatctgatgcaacaaatgta
gagaaagagaaggtttacattgggaaactgaacatgattctggttcagatactgaaacag
gagtggcccaaacactggccaacgtttataagtgacattgtgggagccagtaggaccagt
gaaagcctctgccagaacaacatgatcattctgaagctgctgagtgaggaggtctttgat
ttctccagtggacagatgacccaggtgaaagcaaagcatttaaaagacagcatgtgcaat
gagttttcacagatattccagctctgtcagtttgtcatggaaaactctcagaatgctcct
cttgtccatgcaaccctggagacattactcagattcctaaactggattccgcttggatat
atttttgagacaaaactaatcagcacacttgtatacaagtttttaaacgtcccaatgttt
cgaaatgtgacgcttaagtgcctgacggagattgctggtgtgagtgtcagtcaatatgag
gagcagtttgttactctcttcacactgacaatgatgcagttgaaacagatgcttccttta
aacaccaatatcagattggcttattcaaatggaaaagacgatgagcagaattttattcag
aaccttagcttgtttctctgtacgtttttaaaagaacatgggcaactcgtagaaaagagg
ctcaacctaagggaaactctgatggaggctcttcattacatgttgttggtgtcagaagtt
gaagaaacagagatttttaagatttgtcttgagtattggaaccatctggcagctgaactc
tatcgggaaagtccattttcaacatcgacatctccattattgtctggaagtcaacacttt
gatgtccctcctcgaaggcagctgtatttgccagtgttgtcaaaaggtcgtctacttatg
gtcagtcgaatggctaaaccagaagaagtgctggttgtggaaaatgaccaaggagaagtt
gtaagagaatttatgaaggacacagattccatcaacttgtataaaaacatgagggaaacc
cttgtgtaccttacacatttagactatgcagacacagaacgtattatgacagagaaactt
cacaatcaagtaaatggtacagagtggtcttggaaaaacctgaacacactttgctgggct
attggttcaatcagtggagcgatgcatgaagaagatgaaaagaggttcttggtaacagtt
attaaggatcttcttggactatgtgaacaaaagaggggaaaggacaacaaagctattatt
gcatcaaacataatgtacattgtggggcagtatcccagatttctcagagcccactggaaa
ttcttgaaaactgtggtcaacaagctgtttgaattcatgcatgaaactcatgatggcgta
caagatatggcatgtgacacatttattaaaatagcacagaaatgccgtaggcactttgtt
caggtgcaagtaggagaagtaatgccatttatagatgaaattctgaacaacattaacaca
ataatctgcgaccttcagccacaacaggttcatacgttctatgaagctgtcggctacatg
attggggcacagacagaccaaacagtgcaagagcacttaatagaaaaatacatgcttttg
cctaaccaagtgtgggatagcatcattcagcaggcaaccaaaaatgtagacattctgaag
gatccagaaacagtgaagcaacttggcagcatactgaaaacgaatgtaagagcatgtaaa
gctgttggtcatcctttcgtaattcagcttggcagaatctacctggatatgctgaatgtg
tacaagtgcctcagtgaaaatatttctgcagcaattcaaacaaatggagaaatggtgacc
aaacaacctttgataagaagtatgcgaacagtaaaaagggaaaccctgaaactgatttca
ggttgggtgagccggtccaatgattctcagatggtagcagagaactttgtgccccctctc
ttggatgcagttcttattgattatcagaggaatgtccctgcagccagggagcctgaagta
ctgagtaccatggctaccattgtgaataaattgggtggtcacatcacagctgaaattcca
cagatatttgatgctgtcttcgagtgtactttaaatatgattaacaaagactttgaggaa
tatcctgagcatcgaacaaatttcttcttgctgctgcaggctgtaaattcccattgcttc
ccagcgttcctggccattcctcctgcacagttcaagttggtgttggactccattatctgg
gctttcaaacacacaatgagaaatgttgctgacacaggtctgcagatcttgtataccctt
ctacaaaatgttgctcaagaagaggcagctgctcaaagtttctaccagacgtatttctgt
gacattctgcaacatatcttctctgtagtaacggatacctctcatactgctggtttaaca
atgcatgcatcaattcttacatacatgtttaatttggtggaggaaggcaagataaatgca
gcattgaatccagcaaatccagtcaacaaccagatgtttattcaagagtatgtggccaat
cttctcaagtcagccttcccacacttacaagatgcacaagtaaaagtatttgtaactggg
ttgttcagcttgaatcaagatattcctgccttcaaagaacatctaagggactttctggta
caaattaaggagtttgctggtgaagatacatcagacctgttcttggaagaaagagaatca
tctcttcgacaagcccaggaggagaaacacaaattacaaatgtctgttcctggaatccta
aatccacacgaaattccagaagaaatgtgtgattga
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