Polyodon spathula (Mississippi paddlefish): 121316228
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Entry
121316228 CDS
T07273
Symbol
utp25
Name
(RefSeq) digestive organ expansion factor isoform X1
KO
K14774
U3 small nucleolar RNA-associated protein 25
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121316228 (utp25)
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121316228 (utp25)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP25_NTPase-like
Utp25_C
DEAD
Motif
Other DBs
NCBI-GeneID:
121316228
NCBI-ProteinID:
XP_041107081
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Position
5:complement(69066111..69080680)
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AA seq
755 aa
AA seq
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MGKRRQKSHLFNSLTKKQKKHLKDFGEEHPFHDNVNEKVEATHIVELPDSLDQSSAESDV
ESEPERVSAYQKLLSTMNSPEEEEEESEEEDGSDEGEDPEVEEESEQEVEEGGDEDDESE
EGEEENGIPGQEAEEQGGDEAEEVGIPGEEFTDKEHESKFSLETNVLGEEEESTETGESI
SQRASSQDPFVQHLDTELNDEDVKTITTNDKTRTHVKWPRLGNLVYTSSQQKYSSPLSAP
KDLSPSQAHLYKPLELTWPKVNQPFLLPEHQHGFTPLQQELLSIMGSYRDLYLPESSALA
NGPQVRSVYCLHALNHVLKANSQVLAHNTQLRNTKPGSEPDELRDQGLTRPKVLILVPFR
DSAMCVVQTLISLLEVGDKKLDVSNKKRFKDEFGSDPENQPANLSRPDDYHAVFSGNVDD
HFRIGVSILQKSMRLYSPFYSSDIIVASPLGLRTVLGVEGDKKREFDFLSSIELLIIDQA
DVFLMQNWEHVLHVMKHLNLQPLDSHGVDFSRVRMWSLNNWSRYYRQTLLFSAIQDPQIN
AIHSKHCCNYRGQVAVKNLPKTGSISQVLVQLPHIFQRLEADSFMDQDARFQFFIGKVLP
QYRDAVMSHTLIYIPSYFDYVRLRNYLRKEELNCTHICEYSKKSEVSRARHFFQTGDKQF
LLFTERFHFYKRYTIKGICNLIFYALPTYPHFYSEMCNMLKASSSGEEATWTCTALYSRY
DMQRLAAIAGAERAAQMLQSKKSVHLFVTGGEETL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaacgaaggcagaaaagtcacctttttaacagtttaaccaagaaacagaaaaag
catctgaaagattttggagaagagcacccttttcacgataatgttaatgaaaaggtggag
gcaacacatatcgttgaactgccagacagtctggaccagtcaagtgcagagagcgatgtg
gagagcgagccagagcgtgtgtctgcctatcagaaactgctgtccacaatgaacagtcct
gaggaggaggaggaggagagtgaggaagaggacgggagtgatgagggggaggatcctgaa
gtagaggaggagagcgagcaggaggtggaagaaggtggtgatgaagatgatgagagtgag
gagggtgaggaagagaatggaataccagggcaggaggcagaggagcagggcggagatgaa
gctgaggaagtagggatcccaggcgaggaattcactgacaaggagcatgagtctaaattc
agcctggagaccaacgtcctgggagaagaggaggagagcactgagacaggagagagcatc
tcacagagggccagttcacaggatccctttgtgcagcacctcgacacagagctgaatgac
gaggatgtgaagaccataacaacaaatgacaaaacaaggacacatgtgaagtggccaaga
ctgggcaacctggtgtacacctccagtcagcagaagtacagctcacctctcagtgcgccc
aaggacttgagcccaagccaggcacacctctacaaacccctggagttgacctggcccaaa
gtgaaccagcccttcctgctcccggagcaccagcacggtttcacccccctgcagcaagag
ctcctcagcatcatgggcagctaccgggacctgtatctccctgagagctctgccctggcc
aatgggccgcaggtgcgcagtgtgtactgcctgcacgctctcaaccacgtgctcaaggcc
aactcccaggtcctcgcccacaacacccagctgcgcaacaccaaacctggctctgagcca
gatgagctgcgggaccaggggcttacccggcccaaggttctgattctggttccgtttcga
gactctgctatgtgtgtggttcagaccctcatcagtctgctagaggtgggcgacaagaag
ctggatgtgagcaacaagaagaggttcaaggatgagtttggctccgacccggagaaccag
ccagctaacctctcaagacccgatgactaccacgctgtcttctcagggaatgtggatgac
cacttcaggataggtgtgtctatcctgcagaagagcatgcgtctctactcccccttctac
tcctctgacatcatcgtcgcctctccactggggctgcgtaccgtgctgggggtggagggt
gacaagaagagggaatttgacttcctgtcctccatcgagctgctcatcattgaccaggct
gacgtcttccttatgcagaactgggagcacgtgctgcacgtgatgaagcacctgaacctg
cagccgctggactctcatggggtggacttctcccgggtcaggatgtggagcctcaacaac
tggagtcggtattacaggcagaccctgctgttcagtgccatccaggacccccagatcaac
gcaatccatagcaagcactgctgcaactaccggggccaggtggctgtaaagaacttgccc
aaaaccggctccatcagtcaggtgctggtgcagctgcctcacatctttcagagactggag
gcagacagcttcatggatcaggatgccagattccagttctttattggtaaggttctcccg
cagtaccgggacgctgtcatgtctcacacgctcatctacatcccctcctattttgattac
gtccgactgcgcaactacctgcgcaaggaggagctcaactgcacacacatctgcgagtac
tccaagaaatcggaagtctccagagccaggcacttcttccagacgggggacaagcagttc
ctcctgtttactgaacgcttccacttctacaagagatacacaatcaaagggatctgcaac
ctgattttctatgcgctgcccacctacccacacttctacagtgagatgtgcaacatgctg
aaggcttcgagcagcggagaggaggccacctggacctgcactgccctgtactcccgctac
gacatgcagaggctggctgccatcgccggggcagagcgcgctgctcaaatgctgcagtct
aagaaatcagtccacttgttcgtcactgggggggaggaaacgctgtaa
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