Polyodon spathula (Mississippi paddlefish): 121316247
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Entry
121316247 CDS
T07273
Symbol
usp45
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 45 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121316247 (usp45)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121316247 (usp45)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121316247 (usp45)
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121316247 (usp45)
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121316247 (usp45)
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121316247 (usp45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
121316247
NCBI-ProteinID:
XP_041107126
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All DBs
Position
5:complement(70195081..70252633)
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AA seq
805 aa
AA seq
DB search
MRVKGPFSLKADEMTKRSNRPRKPRDEESSDEVTGLTCQHVRKAVDLNSVKKAVSQSLWS
VCSECLKERTMYDGEPVGSFDIWMCLKCGFQGCNPPDRQHLMRHFQTVHPEPHCIVLSLS
TWKVWCHECNEELSTHCNKKVLAQMVDFLQKHSDKTSSDTSSKIIKIREDATEGSDLLKG
KTPVISTLVPVKGINNLGNTCFFNAVMQNLAQTHLLNDLIFEMKEKGPKIKICPPLETNL
DPLVVTLPSPEPLTSAMFLFLHCMKDTGKGPVSPKLLFNQLCHKAPRFKGYQQQDSQELL
HYLLDAMRVEETKRIKASILKSFNNPTEKTADEETKRQVKAFGKEGVKMNFVDQIFVGEL
TNTIMCEECEHISTVKEAFIDLSLPIIEERVSKPANPGRTTKFSKLQERELSEEATSPTL
VHPSKNTKKHAAGKDKNHLRSQKTPDKCSFGTEESGNDEDDCPADLKCIYREAGSKKVAA
NGSEKDGSNLDSSNDADSEASESECPSKQTLNSSTVDYIKTDSSNHSPLKSDSLHSKYKD
CNRNEPLTCAVSRLSLNNNISETLCSSPNQQEQTGSVSHSKDSAKEKPLISQNPQIAFQS
LSHSYVPSSKECSVQSCLYQFTSVELLMGNNKLLCENCTEKRQKHQKRTITTAERKAENV
YTNARKQMLISALPPIVTLHLKRFHQAGMSLRKVNRHVDFPMVLDLAPFCSTSCKNIVER
ERVLYSLYGIVEHSGSMRGGHYTAYVKIRARHRRHEHRRNVAGQKEAVDTSPGQWVYVSD
THIQTVPESRVLNSQAYLLFYEALL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtaaaaggtccattttctttaaaagctgatgaaatgacaaagagatcaaatagg
ccgagaaagcccagagatgaggaatcctccgatgaagtcactggtttaacatgccagcat
gtacgtaaggctgttgatctaaactctgtgaagaaagcagtgtcacagagtctgtggtct
gtgtgctcagaatgtctcaaggaaaggactatgtatgacggagagcctgtaggttccttt
gatatctggatgtgtctaaaatgtggtttccagggctgcaatccacctgacagacagcac
ttgatgaggcatttccagaccgtacacccagaaccccactgcattgttctcagtctgagt
acatggaaagtatggtgccatgaatgtaatgaagaattatccacgcattgcaacaaaaag
gttcttgcccagatggttgactttcttcagaaacattcagataagacatcatcagacaca
tcatcaaaaataataaaaatccgagaggacgctacagagggcagtgatcttttgaagggg
aaaactccagtcatcagcacattagtacctgtgaaaggcataaacaatctgggaaatacc
tgcttttttaatgccgttatgcagaatttggcacagacacacttgctgaatgacttgatt
tttgagatgaaggaaaagggacccaagataaagatatgtccaccgctggaaacaaacttg
gatccattagttgtgactctcccaagccctgagcctttgacttctgccatgttcctgttt
ctccactgcatgaaggacacagggaaagggccagtttctcccaaactgctctttaaccag
ctgtgtcacaaagcacccagatttaagggctaccagcagcaagatagccaggaacttcta
cactatcttctggatgctatgagagtagaagagacaaagcgtataaaagctagtatcctg
aagtcatttaataacccaactgagaagactgcagatgaagaaacaaagcggcaagtgaaa
gcatttggcaaagaaggtgtaaagatgaattttgttgaccagatctttgttggagaattg
actaatactatcatgtgtgaggaatgtgaacatatttctactgtcaaagaagctttcatt
gatttatctctcccaataattgaagaaagggtttctaaacctgcaaatcctggaagaaca
acaaaatttagcaagcttcaagaaagggaactttcagaagaggcaacatcacctaccctt
gttcatccttcaaaaaataccaagaaacatgctgcaggaaaggacaagaatcatctaaga
tcccaaaagacaccagacaaatgttcattcggtactgaagaaagcggtaatgatgaagat
gactgtcctgcagatctgaaatgcatttatagggaggctggtagtaagaaggtggcagct
aatggcagtgagaaagatgggagtaatttagatagcagtaatgatgcagatagcgaggct
tcagaaagtgagtgcccttcaaagcaaactttaaacagcagcactgttgattacatcaag
actgacagttcaaatcactcccccttaaagagtgactctttgcacagcaagtataaagac
tgcaatcgtaacgagcctctcacatgtgcagtgtccagactcagcctgaacaataacata
agtgaaacattgtgcagtagcccgaatcagcaggaacaaacaggcagcgtttcacacagt
aaagattcagccaaggaaaagcccttgatatcccagaatcctcaaatagctttccagtca
ctctcccatagctacgtacccagttctaaagagtgctctgtccagtcatgtctatatcag
tttacttcagtggagctgctaatgggcaacaataagctgctgtgtgagaactgtacagag
aagcgtcagaaacaccagaagaggaccattacaactgccgagagaaaagcagaaaatgtt
tacaccaatgctcgtaaacaaatgctcatctctgctctccctcccattgtaactcttcat
ctcaaacggtttcaccaggcaggtatgagtctgcgcaaagtaaatcgtcatgtggacttc
ccaatggttttggatttagcaccattctgttctacttcatgcaagaatattgtggagaga
gagagagtgctgtacagtctatatggaatagtagagcacagtggctcgatgcggggaggt
cactacactgcctatgtaaagatcagagcccgtcataggagacatgaacacaggagaaat
gttgcaggtcagaaggaagctgtggacacatcaccaggtcagtgggtatacgtcagcgac
acccacatacaaactgttcctgaatcaagagtactcaattctcaagcctatctgcttttc
tatgaagcattgttgtag
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integrated database retrieval system
