Polyodon spathula (Mississippi paddlefish): 121316262
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Entry
121316262 CDS
T07273
Name
(RefSeq) elongation of very long chain fatty acids protein 4-like
KO
K10249
elongation of very long chain fatty acids protein 4 [EC:
2.3.1.199
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00062
Fatty acid elongation
pspa01040
Biosynthesis of unsaturated fatty acids
pspa01100
Metabolic pathways
pspa01212
Fatty acid metabolism
pspa04382
Cornified envelope formation
Module
pspa_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
121316262
01040 Biosynthesis of unsaturated fatty acids
121316262
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121316262
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspa01004
]
121316262
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
121316262
Lipid biosynthesis proteins [BR:
pspa01004
]
Elongase
PUFA
121316262
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELO
RTG2_C
Motif
Other DBs
NCBI-GeneID:
121316262
NCBI-ProteinID:
XP_041107157
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Position
5:71172172..71182840
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AA seq
308 aa
AA seq
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MEIIAHFINDTIQFYKWGLTISDKRVESWPLMQSPLPTLAISSLYLLFIWLGPKYMQNRE
PFQLRSTLIIYNFGMVILNLFIFKELFLAARAAGYSYICQPVSYSEDVNEVRIAGALWWY
YISKGIEYLDTVFFILRKKFNQVSFLHVYHHCTMFTLWWIGIKWVAGGQSFFGAHMNASI
HIVMYLYYGLAAFGPQIQKYLWWKKYLTIIQMIQFHVTIGHTALSLYIDCSFPKWMHWAL
IAYAVTFIVLFANFYYQTYRHPRKETSSKAGKVAVNGVVSVTNGVSKLESKLVVENGRKK
KKGKAKRE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggagatcattgctcatttcattaatgacaccattcagttctacaaatggggccttaca
atatcagacaagcgggtggagagttggcccctgatgcagtcccctctacccacgttagca
ataagctctctctaccttctcttcatctggctgggtccaaagtatatgcagaacagggag
ccattccagctgcgctccacactcatcatctataactttgggatggtgatactgaattta
ttcatctttaaagagctctttcttgctgcaagagcagctggttacagctacatttgccag
ccagtcagttactctgaagatgttaacgaagttaggatagcaggtgccctgtggtggtac
tatatctcaaagggaatcgagtatttggacaccgtgtttttcatcttgagaaagaaattt
aaccaggtcagcttcctccacgtctaccaccattgcacaatgttcactctctggtggatt
gggatcaagtgggtggctggaggacaatctttctttggagcccacatgaatgcttctatt
cacatcgtcatgtatttatactatggactagcagcatttggcccgcaaatccagaaatac
ctgtggtggaagaaatacctaactattatacaaatgattcagttccatgtcaccattggc
cacacagccctgtctctctatatagactgctccttccccaagtggatgcactgggccctg
attgcctatgctgtaaccttcattgtcctcttcgcaaacttctactaccagacctaccgg
cacccaaggaaggagacatcctccaaagcaggaaaagtggctgtgaacggggtcgtgtcc
gtgacaaacggggtgagcaagctggagagcaaactcgtggtggagaatgggaggaagaag
aaaaagggaaaagcaaaacgggaatga
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