Polyodon spathula (Mississippi paddlefish): 121316265
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Entry
121316265 CDS
T07273
Name
(RefSeq) protein SOGA3 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121316265
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121316265
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
ATG16
Fez1
YabA
TSC22
Halo_GVPC
DUF6003
Motif
Other DBs
NCBI-GeneID:
121316265
NCBI-ProteinID:
XP_041107164
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All DBs
Position
5:71204420..71217667
Genome browser
AA seq
825 aa
AA seq
DB search
MNPAASGAADSLQLDNSNRKQQRASSPARFRDGTTRFASKTTPSAKSNAPKQGLKHTRGS
VQGFVVNSKDKQLTSRGVVAVHPGGAEETNASNRDRAEAGKKNEDRNNQVPETRSTDITS
IKGDYYRVVSDQPGSTSKSSKGKLKNQQKGGGEASSCSKQTSKTSVRCGPGFGKEGCLQS
EFIQFHINKRLKKCGKMHTKTTSTQETDSQSEVPAEGVNMETVTQQDQSLQNEIERLIEE
NEDLKRDIDEMRTEMDEMRDSFYEEDACQLQDMRRELERANKNCRILQYRLRKAERKRLR
YAETGEIDTELVRSLEQDLKVAKDVSVRLHHELENVEEKRAKTEEENEKLRQQLIEVEIT
KQALQNELERAKELSLKRRGSKDLQKSEKRTPQTPTEDDNEDLKCQLQFIKEEAILMRKK
MAKIDKEKDRLEQELQKYRSFYGDLDSPLPKGEAGGPPTTREAELKLRLRLVEEEANILG
RKIVELEVENRGLKAELDDLRGEEHAGASGSSFREQSESISELRQQLQLVEDEAELLRRN
LADMEDQNKKITNEVNKYKFKAGTHESSRHSDSAKTEALQEELKAARMQINELSGKVMQL
QYENRVLMSNMQRYDLASHLGIRGSPRDSDAESDPGKRESDDDSRPPHRKREGPIGGESD
SEEVRNIRCLTPTRSLYSAEGRFLPKNFKDRQQMIDIRMEAERLSRTIDRLISDTSTIIS
EARIYVANGDFFGRMDEEDDGSRIREQELLYRINAQMKSFRKELQTFIDRLEVPKSDERG
AEEPMSVSQMFQPIILLILILVLFSSLSYATIFKLVFLFTLFFVL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgccgcaagcggcgctgctgattctctgcagctagacaatagcaacagaaaa
caacagcgggcttcgtctccagctagattcagggatgggaccacgagattcgcctctaaa
accacaccatctgctaaaagcaatgcacccaaacagggcctgaaacatacccgcggttct
gtccagggatttgtagttaacagcaaagacaaacagctgaccagcagaggtgtggtcgct
gttcatccgggtggtgctgaagaaactaacgcatcaaatagggacagggcggaggcagga
aagaaaaacgaggacagaaacaaccaagtacctgaaacccggagcactgatataacatct
ataaaaggggattattatcgcgtcgtttctgaccagcccggcagcacgtccaaatcgtcg
aaagggaaactgaaaaaccaacagaagggcggaggcgaagcgtccagctgcagcaagcag
actagtaagacttctgtaagatgcgggcccgggtttgggaaagaagggtgtctgcagtct
gaatttatccaatttcacatcaacaaaaggctaaagaaatgtggtaaaatgcacaccaaa
acaacaagtacccaagaaacagactcgcaatcggaggtgcctgctgaaggggtcaatatg
gagactgtgacacagcaagatcagagcctacaaaatgaaatagagagattaatagaagaa
aatgaagatctcaagagagacattgacgagatgcggacagaaatggatgagatgagggac
agtttttacgaagaagatgcttgccagctgcaggatatgcgtcgggagctggagagagcc
aacaaaaactgtcgaatattgcagtaccgcctgcggaaggcagagagaaagaggctgaga
tacgctgagacaggagagatcgacaccgagctggtgagaagtctggagcaagacctcaag
gtggcaaaagacgtgtcagtaagacttcatcacgaactggagaacgtagaggagaagcga
gcaaaaacagaggaggagaacgaaaagctacgacagcagctcatcgaggtggagatcacc
aagcaagcgctgcagaacgaactggagagagcaaaagagttatcactaaaaagaagagga
agcaaggatttgcagaagtctgagaaaaggactcctcaaacaccaacagaggatgacaat
gaggacttgaagtgtcagcttcagtttatcaaagaggaagctatactaatgaggaagaag
atggcaaaaatcgacaaagagaaagatcggctggagcaagagctgcagaagtatcgctca
ttctacggtgatcttgacagccctttaccaaaaggtgaggctggagggccccccaccacc
agagaggcagaactgaagctgcgcctgagattggtggaggaagaagccaacatcctgggc
cggaagatcgtggagctggaagtggagaacaggggattgaaggctgaactcgacgacctc
cgtggtgaagagcatgccggtgcctctggctcgtccttcagggaacagagcgagtcgatc
tcggagctaaggcaacagctgcagctagtggaggatgaagcagagctgttgaggaggaac
ttggccgacatggaggaccagaataagaaaataaccaatgaggtcaacaagtataagttc
aaggccgggacgcacgagagttccaggcacagtgacagtgccaagacagaggccctccag
gaggagctgaaggcagctagaatgcagatcaacgaactcagcggtaaagtcatgcagctg
cagtacgagaacagggtcctgatgtccaacatgcaacgctatgacttggcctcgcacctg
gggatccgcgggagcccccgggacagtgatgcagagagcgatcccggaaaaagggaaagt
gacgatgattcacgcccccctcacaggaaacgagaggggcccattggcggggagagcgat
tctgaagaggtgcgcaacatccgctgcttgacccctactaggtccctttactcagccgag
gggcgttttttacccaaaaacttcaaagaccgacaacagatgattgacatccgcatggaa
gcagagcggctcagcaggactatagaccggttgatttctgacaccagcaccatcataagc
gaggccaggatttacgtggccaatggtgacttctttggaagaatggatgaagaagatgac
ggcagccggatacgagagcaggagctgctctacagaatcaatgcccagatgaagtccttt
cggaaggagcttcagactttcatagacagactagaggtccccaagtctgacgaaagggga
gctgaagaaccaatgtctgtaagtcagatgtttcaacctattattttacttattctcatt
cttgtcttgttttcatccctttcctatgccaccatttttaaattggtctttctgtttaca
cttttctttgtactttaa
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