Polyodon spathula (Mississippi paddlefish): 121316281
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Entry
121316281 CDS
T07273
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121316281 (ascc3)
Enzymes [BR:
pspa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121316281 (ascc3)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
121316281 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ASCC3_N
ResIII
Helicase_C
Helicase_PWI
AAA_22
AAA_19
TPR_IFT122
Motif
Other DBs
NCBI-GeneID:
121316281
NCBI-ProteinID:
XP_041107195
LinkDB
All DBs
Position
5:72669976..72930411
Genome browser
AA seq
2203 aa
AA seq
DB search
MAQPRLTGALRSFSNVSRKDDYTEEPCDLKSKRLKRQEEFSKAGLTWKKIVQFVNEHLDK
KEQPSANEDLHAVLKAARQIVGAEFGKDMIESAAVFLFTTFYAKDQLGQEETRTIRQMFG
PFPSSSASAACSAVNRVTSVFDETQLETFIKTHSANCLKDQVPFGKNITFSFDLYALDHL
EDLPLNDDDEKRLKEFSLDYDKFMNNQQEHLRNGSFAKDGPRPSGNIDDSFLRREVEKYV
LQGTLESTTAEDLCTTLFESLASTKSDDELQNELFELLGPEGFELIEKLLQQRSSIVESS
LATVSDMKLNYLQDASRKASGESSVPIYGCQVTIQSEQEKQLMKQFRREEKRIAKREKRW
DDSEGDIPMHFDPKELRIQREYALLNAQKSPILGREKTYEKIHYPNVYDCCAEAMKTSAF
IGGSKLLLPEGIKRENTKMYEEVTIPPNEPMPVGFEEKPVYITDLDEIGQLVFKGMKRLN
RIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHIQQGVIKKDEFKIVYVAP
MKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGD
VALSQIVRLIILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPNYLDVA
AFLHVNPYIGLFYFDNRFRPVPLGQTFVGIKTTNKIQQLRDMEEVCYDNVVEQIRAGHQV
MVFVHARNSTVRTAMALIEMAKNRGESSFFFADQGAEYGHSEKLVQKSRNKQLREMFPDG
FGIHHAGMLRQDRTLVENLFSRGYIKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGAL
VDLGILDVMQIFGRAGRPQFDKYGEGIIITTHEKLSHYLTLLTQQNPIESQFLGSLADNL
NAEVALGTVTNVEEAVKWLSYTYLYVRMRANPLVYGINHKAHQMDPGLEMYRQELVLEAG
RKLDKARMIRFEERTGYFSSTDLGRTASHYYIKYNTMETFNELFGAHKTEADIFNIVSKA
EEFEQVKVRDEEMEELEQLLNNYCELPAAGGVENGYGKINILLQTYIGRGEVDSFSLISD
LSYVAQNAARIVRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGWANPLRQFPVLPGSVL
SKLEERKLTIDKLKDMRKDEIGHMLHHVNIGLKVKQCVHQIPSITMEASIQPITRTVLRV
RLTINPDFKWNDTAHGSVGEPWWIWVEDPANDHIYHSEYILLQKKMVVTNEPQHVVFTIP
IFEPLPSQYYIRAVSDRWLGAEAVCVINFQHLILPERHPPHTELLDLQPLPVSALGNREY
ESLYKYTHFNPVQTQIFHTLYHTDNNVLLGAPTGSGKTVAAEIAIFRVFNKYPNSTAVYI
APLKALVRERIEDWKVRIEEKLGKKVVELTGDVTPDMRAIAKADLIVTTPEKWDGVSRSW
QNRSYVQKVAILIIDEIHLLGEERGPVLEVIVSRTNFISSHTASPVRVVGLSTALANARD
LGDWLGIGQMGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPAFQAIRSHSPAKPV
LIFVSSRRQTRLTALDLMAFLATEDNPKQWLHMEERAMTDVIATVRESNVKLTLAFGIGL
HHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYFDGKTRRYVDY
PITDVLQMMGRAGRPQFDDQGKAVILVQDIKKDFYKKFLYEPFPVESSLLGVLADHLNAE
IAAGTVASKQDAMDYITWTYFFRRLIMNPSYYNLDDVNHDTINKYLSNLVEKSLRDLECS
YCIQLGEDNCTIEPLTYGRIASYYYLKHPTVRMFKERLKADCTVEELLSILTDAEEYAEL
PVRHNEDQMNSELARRLPIEVNPHSFDSAHTKTHLLLQAHFSRAALPCPDYATDTKTVLD
NAIRICQAMLDVAANEGWLVTALSICNLVQMVVQGSWLHESSLLLLPNIQQHHLHLFRKW
NQGRGKSRCGGYQGPVECLPELISACEGRERTFTSIVANELQPSLILQAWNFLSHLPVIE
VSMRIKGWWEESQGQNERILPTAASDTRNEKNWVSVHADQEYVLQINLLRINTGHQKRKQ
DSKAVSPRFPKAKDEGWFVVLGEVDKKELLALKRIGYIRNRSTVSVAFFTPEKTGRYIYT
VYLMSDSYLGMDQQYDIYLNVIPTSIASQVNTEVSDAMSDLAL
NT seq
6612 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacctcgtcttacaggagcgctacgctccttttcaaatgtcagcaggaaagat
gattatacagaggaaccatgtgatttaaagtctaaacggttaaaaagacaagaagagttt
tccaaggcgggccttacgtggaagaagattgtccaatttgtcaatgaacatctagacaag
aaggaacaaccgtctgcgaatgaagacttgcatgctgtgttaaaggcagcaagacagatt
gttggggcagagtttgggaaggatatgattgaaagtgcagctgtttttctcttcacaacg
ttttacgccaaggaccaacttggtcaggaagagactagaaccatcaggcagatgtttgga
cctttcccatcatcctccgccagcgctgcttgcagtgcagttaacagggttacatctgtc
tttgatgaaacacagctagaaacctttataaagactcacagtgctaactgtttaaaggac
caagtaccttttggcaaaaatattacattctcctttgacttgtatgccttagaccattta
gaggatttgccattaaatgatgatgatgaaaaaaggcttaaggaattcagtttagactat
gataaatttatgaacaatcagcaggaacacctgagaaatggatcctttgctaaagatggt
cccagaccctctgggaatatagacgattcctttctaaggagagaggttgagaagtatgtg
ttacagggaacattggaatccaccactgctgaagatctgtgtacaaccctgtttgagagt
ctggcttctaccaagagtgacgatgaactccaaaatgagctatttgagctgcttggtcca
gaaggctttgaactaatagagaagctgctgcagcagagatccagtattgtggaatcctct
ctggccacagtgtcagacatgaagttgaactatcttcaagatgcatctcgaaaagcatca
ggagagagcagcgtacctatttatggctgtcaagtcacaattcaatctgaacaagagaag
cagctaatgaaacagtttcgtcgtgaagagaaacgcattgctaaaagggagaaacggtgg
gacgattctgaaggagacataccaatgcactttgaccccaaagaacttcgaattcaaagg
gagtatgcacttttaaatgctcaaaagtccccgatcttgggcagagaaaaaacttatgag
aaaatccattaccccaacgtttatgactgttgtgcagaagccatgaaaacgtccgcattt
atcggcggttcaaagctgctcttaccagaagggattaagagagaaaacaccaaaatgtat
gaagaagtgactattcccccgaatgagccaatgccagttggctttgaagagaaaccagtt
tacatcactgacttggatgagattggacagctggttttcaaagggatgaaacgactgaac
agaatccagtctatagtgtttgagacggcctacaacacaaatgagaacatgctgatctgt
gcacccactggagctgggaaaactaatattgccatgctaactgttttgcatgaaatacgg
cagcatattcaacaaggagttatcaaaaaggatgagtttaagattgtgtacgttgcccct
atgaaggccttggctgctgagatgacaaattacttcagcaagcgtctggagccactgggt
atcgctgtgaaggagctgaccggtgacatgcagctgactaaaggtgaaatcctacggaca
cagatgctggttacaactccagagaaatgggatgtggtcaccagaaagagtgttggggat
gtagctttgtctcaaattgtgaggctgataatcttggatgaggtgcatctcctacatgaa
gacagaggaccagtgctggagagtttagtagcaagaacccttcggcaggttgagtcgacc
caaagtatgatccgaatattaggtctgtctgcaacacttccaaactaccttgatgtggct
gcattccttcatgtgaatccctatatcggactcttctactttgacaacagatttcgacca
gttccactgggccagacctttgtcggaataaagacaaccaacaagattcagcagctacgc
gacatggaggaagtttgttacgacaatgttgtggaacaaattagagctgggcatcaggtg
atggtatttgttcatgccagaaactccacggtgcggactgcaatggcccttatagaaatg
gccaaaaaccgaggagaatcttctttcttctttgctgaccaaggagcggagtacggccac
tcagagaagctggttcagaagtctcgcaataagcagttgcgggagatgttcccggatggc
tttggtattcatcatgcaggaatgctaaggcaggacagaaccctggtggagaacctgttt
tctcgcggatacattaaagttctggtctgcacagcaaccctggcctggggtgtcaacctc
ccagcacacgctgtgatcatcaagggcacacagatctacgatgccaagagaggcgcattg
gttgatttgggaattttggatgttatgcaaatatttggacgtgctggtcgaccccagttt
gataaatatggagaaggcatcattatcacaactcatgaaaagctgagccattacctaact
ctgcttactcagcaaaaccccattgaaagtcagtttctggggagcctggcagacaatctg
aatgctgaggttgcattgggaactgtaacaaatgtagaagaggcagtaaagtggctcagc
tatacatacctgtatgtgcggatgagagccaacccattagtctacggtatcaaccacaaa
gcacaccagatggatcctggtctggagatgtacaggcaagagcttgtcctggaggcagga
cgaaagcttgacaaagccagaatgatccgatttgaagagaggactgggtacttttcttca
acagatttaggccgaactgctagccactactacattaaatacaacacaatggagacattc
aatgaactgtttggcgcccacaaaacagaagctgacatcttcaatatagtgtctaaagca
gaagaatttgagcaggtcaaggtgagggatgaagaaatggaagaactagagcagttgcta
aacaactactgcgagctccctgctgccggtggggtagaaaatggctatggaaaaatcaac
attctgcttcaaacatacatcggacgtggcgaggtggacagcttctccctaatctcagac
ctctcttacgttgctcagaatgcagctcgcattgtccgagctctgtttgagattgccctg
agaaagcgatggcccgccatgacttaccgccttctgaacctctgcaaggttatagacaaa
cgactgtggggatgggctaacccactgcgccagtttccagtattaccaggctccgtcctc
tccaaactggaagaaaggaaacttactattgataagttaaaggacatgagaaaagatgaa
ataggtcacatgctgcatcatgtgaatattgggttaaaggtcaagcagtgcgtccatcaa
attccttctataacaatggaagctagcatacagccaatcacacggactgtccttcgagtc
agactaaccatcaaccctgacttcaagtggaatgatacggctcatggatcagtaggggaa
ccttggtggatctgggttgaagatccagctaatgaccacatttaccattctgaatatatt
ctacttcagaaaaagatggtggtcaccaatgaacctcagcatgtggtgttcaccattccg
atttttgagcccttgccttcccagtactacatccgtgctgtgtcagacaggtggctaggg
gcagaagcagtgtgtgtaatcaacttccagcacctcatacttccagagagacacccacct
cacacggaattactggatctgcagccgcttcctgtctctgccttgggaaaccgggaatac
gagagcctgtacaaatacacgcatttcaacccagtccagactcagatcttccacaccctt
tatcacactgacaataatgtcctcctcggagctcccacaggctctgggaagactgttgct
gctgagatagccattttcagggtcttcaacaagtacccaaattctacggctgtgtacatt
gctcctttaaaagcacttgtccgagaaagaatagaggattggaaagtaaggatagaagaa
aagttgggcaaaaaggttgtggaattgactggtgatgtaacaccagacatgagagccatt
gcaaaggcagacctcattgtcaccacgccagagaaatgggacggagtcagtagaagctgg
cagaacaggagctatgtccagaaagtggccattctcatcatagacgagatacatttacta
ggggaagagcgaggtcctgtactggaggttattgtatccaggactaactttatatcctct
catacagcaagtcctgttcgagttgttggtctgtccacagcccttgctaatgccagagac
cttggtgactggctaggaattggacagatggggttgttcaatttccgtccctctgtgcgc
ccagttcccttggaggtgcacattcatggattcccagggcagcactattgcccccgcatg
gcaagcatgaacaaaccagcattccaagctattcgcagccattcccctgccaagccggtg
ctgatctttgtgtcatccagacgtcagactcgacttactgctcttgacttgatggctttt
cttgccacggaggacaaccctaaacagtggctgcacatggaggaacgagcgatgactgat
gttatcgcgacagtaagggaatccaacgtaaagctgactctggcctttgggatcgggcta
caccatgctggcctgcacgagagggacagaaagactgtggaagagctttttgttaactgc
aaaatccaggtgctgattgccacaagcacactggcttggggagtgaactttccagctcac
ctcgtgattgtaaaaggaactgagtactttgatggaaaaacaagacgttacgttgattat
cctatcacagatgttctacagatgatggggagagctggcagacctcaatttgatgaccaa
ggcaaagctgtgattcttgtgcaagacattaaaaaagatttctataaaaaattcctctat
gaaccattccctgttgagtcaagtttgctgggtgtgcttgcagaccacttgaacgctgag
attgctgcaggaacagttgcatccaagcaggatgccatggattacataacctggacctac
ttcttccgccgcctcattatgaaccccagctattacaatttggatgatgtgaaccatgac
actatcaacaagtatctgtcaaacttggttgagaagtctctgagagacctggagtgctct
tactgtatacagctgggagaggacaactgcactatcgagcctctaacatatggccgcatt
gcctcctattattacctgaagcacccaactgtcaggatgtttaaagagaggctgaaagct
gattgcacagtggaagagttgctctctattctcacggatgcagaagagtatgcagagctg
ccagtcagacacaacgaggaccagatgaacagtgaactggcccgtcgtcttcccattgaa
gtgaacccccattcatttgacagcgctcacaccaagactcacctgctgcttcaagcccac
ttcagccgagctgcactgccttgcccggactatgcaaccgataccaagactgtgctggac
aatgccattcgaatatgccaggcaatgttggatgttgctgcaaatgagggctggctggtc
acagctctgagcatctgtaaccttgtgcagatggtcgtgcagggtagctggttgcatgag
tcatcgctgctgctactgccaaacatccaacagcaccaccttcaccttttcaggaaatgg
aaccaaggcagagggaaaagccgctgtgggggttatcagggcccagttgaatgtcttcct
gagctgatatctgcctgtgaaggaagagagcgcacattcacttccattgtggcaaatgaa
ttacagccttcactcattctgcaggcctggaatttcctgtcccatctcccagttatagag
gtcagcatgaggatcaaaggctggtgggaagagagtcaagggcaaaacgagcgaattctc
cccactgcagcatcagatacaagaaatgagaaaaactgggtatctgtgcatgctgatcag
gaatatgtgcttcagataaacctgctgcgcatcaacacgggacatcaaaagagaaagcag
gacagcaaagcagtctctccccggttccctaaggccaaggatgaaggctggtttgtagta
cttggagaagtggataagaaggaactgttggcattaaaaagaataggatacattaggaac
cgaagcacagtctctgtagctttctttacaccggaaaagactggaagatatatctacaca
gtgtacttgatgagcgacagttaccttggcatggaccaacagtatgacatttacctgaat
gtgatacccaccagcattgcctcccaagtcaacactgaggtctccgatgccatgagcgac
ctggccttgtag
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integrated database retrieval system
