Polyodon spathula (Mississippi paddlefish): 121316312
Help
Entry
121316312 CDS
T07273
Name
(RefSeq) proteasome activator complex subunit 4-like isoform X1
KO
K06699
proteasome activator subunit 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121316312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pspa03051
]
121316312
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Regulatory particles
PA200
121316312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BLM10_mid
DUF3437
HEAT
GyrB_insert
Motif
Other DBs
NCBI-GeneID:
121316312
NCBI-ProteinID:
XP_041107265
LinkDB
All DBs
Position
5:74969489..75016586
Genome browser
AA seq
1848 aa
AA seq
DB search
MNTEEFQRLGFVPQKEIVYNKLLPYSDKLDEESNVILVKIKANLGRAVQLRELWPGVLFW
TRKLSTYIRLYGRKFSKEDHVLFIKLLYELVTIPELEISMMQGFARLLVSLLKKKELLSR
EDLELPWWPLYELLDRILYSKTEHLGLNWFPNSIGPDSSSSKTFMLNILHRCSVENILKT
LVKSCRPYFPEDATKEMLQEWRPLLCPFDVTMQKAISYFELFLPTTLPPELHQKGFKLWF
DELIGLWVSVQNLPGWEGHLVNLFARLASDNIGYVDWDPYVDKIFTRILRSLNLPVGSSQ
VLVPRYLTNAYDIGHIVLWVSSMLGGPSKQTQKQLSGLFNSITSFFHPSNNGRWLMKLMK
LVQRLPASVVRRLHRERYKKQTWLTPVPDSHKLTDQDITDFVESMKQPVLLAMFSKTGSL
DAAQALQNLALMRPELVIPPLLEKTYPAMETLTEPHQLTATLSCVIGVARSLVSGDKRFP
EGPKHMLPLLMRALPGVDPNDFSKCMITFQFIATFSTLVPLVDCSSAVHERDDLTEVERE
LCSVSAEFEDFVLQFMDRCFALIESSTLEQTREETETEKMTHLESLVELGLSSTFSTILT
QCSKDIFKVALEKVFNFATTNIFETRVAGKMVADMCRAATKCHPAESLKLFVPHCCNAIT
QLTVNEDVLREEELDKALLWNLQLLSEITRVDGDKLLPYREQCVKILQRTLHLKFKQGYM
LSCNLLHHLLRSSSLIYPTEYCSVPGGFNKPLSEYFPIKDWGKPGNLWNLNIHWHVPTSE
EKAFVFYILDIILQPELVKLQRHASGELEMPRDDILQSLTIVHHCLMGSGSFLPFLDGER
ITDLVPSLVSLEETALYTGVDYDMSRENYRDAICSVMRKLLHHILENSEDDTKSLFLIIK
IIGDLLQFRGSYKHEFDSRWKSFNLVKKSMENRLTGRKQHIRALLIDRVMLQQELRKLTV
EGCEYKTIHRDLLRDLLRLSTSTYSQVRSKAQQVFFITLGSYNFCCRDLIPLVLEFLKPD
RQDISQQQFKGALYCLLGNHNGVCLANLHDWDCIVQTWPAIISSGLSKAMSLEKPSIVRL
FDDLADKIHRQYETIGLDFSVPDSSLEIAQQIMKSKNPTINLPLPTSEEIEKGVQLQQAK
NIDSVQKYEKLVNNLLDSLSQRNLPWKFEHIAIGFLSLLLRDDKPVPVPAIRFFVQSLNH
DALIVRKMAISAVAGILKQLKRPHKKVEENPYEIGGCSEHSEILVGDRPDNQWMLYDSGS
LPRTKAAWEACTFVEKTHWGYYSWPQKLTLYAPVEEQPKLGLKREDMTEMDQVIFDHFSD
PKFIEQLIKFLSLEDRKGKDKFNPRRFCLFKGLFRNFDDAFLPVLRPHLERLVADSHEST
QRCVAEIVAGLIRGSKHWTFEKVEKLWEFLCPLIRTALTNITVETYSDWGTCIATACESR
DPRKLHWLFEMLMESPVNGEGGSFVDACRLYVLQGGLAQQQWRVPELLHRLLQYLEPKLT
QVYKNVRERIGSVLTYIFMIDVSLPNSLQSSSPRISDFTARILVRLKPLMDVDEEIQNHI
VEENGYGEQDERTQAIKLLKTVLKWLMASAGRSFSTAVPEQLQLLPLLFKIAPVENDDNY
DEMKRDAKTCLSLMSQGLLYPQQIMLVLPVLKETAGSASWHARYTVLTYLQTMVFYNLFT
FLNNKEAVHDVQWLVLKLLEDEQLEVREMAATTLSGLLQCNFLTMDAPMQTHFEKLCKTR
LPKRRKRDPGSVVDTIPPADLVKRHAGVLGLSACILSNPYDVPTWMPQLLMDLSAHLNDT
QPIEMTVKKTLSNFRRTHLDNWQEHKQQFTDDQLLVLTDLLVSPCYYA
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagaagagtttcagcgattaggttttgtccctcagaaagagatcgtctacaac
aaactcttaccttattcggacaaattagacgaggaatccaatgtaattttagtcaaaatt
aaagctaacctgggccgggctgtccagctcagggagttatggcccggggtattgttctgg
accaggaaactttcgacgtacattcgactgtatggaagaaagttcagcaaagaggatcat
gtactgttcattaagttgttgtatgagttagtgaccattcctgaactggagattagcatg
atgcaaggatttgcacgtctgttggtcagtttgctgaagaaaaaagaactcctttcaaga
gaagatttggaattgccgtggtggcccttgtatgaattgttggatagaatcctctactcc
aagacagaacaccttgggctcaattggtttcctaattccattgggccagattcatcttcc
tctaaaacctttatgctaaatattttgcataggtgctctgttgaaaacattttgaaaacc
cttgtcaaaagttgtagaccgtatttcccagaagatgctacaaaggagatgctgcaagag
tggcggcctttgctgtgtccttttgacgtcaccatgcagaaagccatcagctattttgaa
ctattcctgcccaccaccttgccacccgagcttcaccagaaaggatttaagctgtggttt
gatgagctaattggactttgggtctctgttcaaaaccttcctgggtgggaggggcatctg
gtaaacctgtttgcacgtttggccagtgataacattgggtacgtagattgggatccctat
gttgataagatatttacccggattctcagaagcttgaaccttcctgtaggaagcagccaa
gttttagttccaagatacttgaccaatgcctatgatataggccacatagtactgtgggtc
tcatcaatgctgggtggaccaagcaagcaaacccaaaaacagctaagtggcttgttcaac
agtattacttccttctttcatccttctaacaatggcaggtggctgatgaagctgatgaaa
cttgtgcagcgcttgccggccagtgtggtaagaagactacaccgagagcgatataagaag
cagacgtggctaacgccagtccctgacagccacaagctcactgaccaggacattacagac
tttgtggagagcatgaagcagcctgtgctgctggcgatgttcagtaaaacgggcagcttg
gatgcagcccaggctttgcagaacctggcactgatgagacctgagcttgtcatcccaccc
ttactagaaaaaacctatcctgcaatggagactctaacggaacctcaccagctcacagcc
accctgagctgtgtgatcggagtggctcgcagcctggtttctggagacaagaggtttcct
gaaggcccaaagcacatgctgccgttgctgatgagagcactgcctggtgtggatccaaat
gacttcagcaagtgcatgataacattccagttcattgcaacattttctactcttgtgcct
ttggtagactgttcatcagctgttcatgaaagagatgacctcacagaagtggagcgggag
ctgtgctcagtcagtgcggagtttgaagactttgtcctacagtttatggacaggtgtttt
gcccttattgaaagcagtacacttgaacagacgagagaggagacagaaactgaaaagatg
actcacctggagagcctagtggagctgggactgtcttccaccttcagcaccatccttacg
cagtgctccaaagacatcttcaaggtggcccttgaaaaggtctttaactttgccactaca
aacatctttgagactcgggttgctggaaaaatggtggctgacatgtgcagagccgctact
aagtgtcatccagcagagtctttgaagctttttgtgccacactgttgcaatgcaataact
cagctcacagtcaatgaggatgttttgcgtgaagaggagctggacaaggcgctgctgtgg
aaccttcagcttttgtctgagatcacccgtgttgatggtgataagttgttgccatacagg
gagcagtgtgtgaagattctccaacggacactccacttgaagtttaaacaaggctacatg
ctttcctgtaacctgctgcaccatctgcttcgatcttcctctctcatctaccccactgag
tactgcagtgtccctggtggcttcaacaagcctctctctgagtactttcccatcaaggac
tggggtaaaccaggtaatctatggaacttaaacatccactggcacgttccaacatcagag
gagaaggcctttgtattttatatactagatattatcctccaaccagagctggtcaaactg
cagcgccatgcaagtggagaactggaaatgccaagggatgacatactgcagagccttacg
attgtgcatcactgtctgatgggctctgggagcttcctgcctttcctggatggagaaaga
ataactgaccttgtaccaagcttggtgagtttggaggagacagcactttatactggcgtt
gactatgacatgtcacgggagaactacagagacgctatttgcagtgttatgaggaaactc
ttgcatcacattctggaaaattcagaggatgacacaaagtcattgtttttgatcattaag
attattggtgacttgttacagttcagaggatcttacaagcatgagtttgactcccggtgg
aaaagcttcaaccttgtcaagaagtccatggagaatcggctgactggtaggaagcaacac
atccgagcattactcattgacagagttatgctacagcaagagctgaggaaactgaccgtt
gaagggtgtgaatacaagactattcatagagaccttttaagggacctcctacgtttgtca
accagtacatacagtcaggttaggagcaaggcccaacaagttttcttcataaccctcgga
agttacaacttctgctgcagggacctgattccactggtgctggagttcctaaaaccagac
agacaggacatctcccagcaacagtttaaaggtgccttgtactgtctcctggggaatcac
aatggagtttgcctggctaatctccatgactgggactgcattgtacagacctggccggct
atcatctcatctggactcagcaaggctatgtctttagagaagccttccatcgtccgtctg
tttgatgatcttgcagacaagatccaccgacagtacgaaaccataggattggacttcagt
gtacctgatagtagtttggagatagctcagcagattatgaagtcaaaaaacccaactata
aatctcccactgcccacttcagaagagattgagaaaggtgttcagctccagcaggcaaaa
aacattgactctgtgcaaaagtatgaaaaattggtcaataacttgttggactccctcagt
cagagaaatcttccctggaagtttgagcatattgccattggctttctttccctgctgttg
agggatgataagcccgtccctgtcccagcaatccggttctttgtccagagtctgaaccac
gatgcactcattgttcgaaagatggcaatctcagctgttgctggtattctgaaacagctg
aagagacctcacaaaaaagtggaagagaatccttatgaaattggtggatgcagtgaacat
tctgaaatcttggtgggagacaggcccgataatcaatggatgctttatgatagtggcagt
ttgccaagaacgaaagcagcctgggaggcgtgtacctttgtggagaaaacacactgggga
tattacagctggcctcaaaaactaactctttatgcccctgtggaggaacaaccaaaactt
ggtctaaagagggaagatatgacggagatggatcaggtcatcttcgatcacttttctgat
cccaaatttatagagcaattgataaagttcctttcactggaagacagaaaaggaaaggat
aagttcaatccccggagattctgcctctttaagggtttgttcagaaactttgacgatgcc
tttttgcctgtgctgaggccccacttggagcgtttagttgcagattcccatgagagcacc
cagcgctgtgtggctgaaatcgtcgccgggctcatcagaggcagcaaacactggactttt
gaaaaggtggagaagctgtgggagtttctgtgtccgttgattcgaacggctttgacgaac
atcacagtggagacttacagtgactggggaacgtgcattgccacagcctgtgagagcaga
gaccctcggaaactgcactggctgtttgagatgctaatggagtccccagtaaacggcgaa
gggggttcttttgtagacgcctgccggctgtatgttctgcaaggaggtcttgcccagcag
caatggagagtccctgagcttcttcatagactgcttcagtacctggagcccaagctcacg
caggtctataaaaatgtgcgggagaggataggaagtgttctaacctacatcttcatgatc
gatgtgagtctacccaactcgctgcagagctcctccccacggatctccgacttcacagcc
cgcatcctggtaaggctgaagcccctgatggacgtggacgaggagatccagaaccacatt
gtggaggagaacggatacggggagcaagacgaaagaacccaggccattaaactgttgaag
acagttttaaagtggctgatggcgagcgcaggaaggtccttctccacggctgttccagag
cagctccagctcctccctctgctttttaagattgcaccagtagagaatgatgacaattac
gatgagatgaagagagatgcaaagacttgcttgtcccttatgtctcagggattgctgtat
ccacagcaaataatgttggtgttaccagttcttaaagagacagcagggagtgcttcttgg
catgcccgatacacagtgctgacctatctccaaacaatggtgttttacaacctctttacc
tttttgaacaacaaagaggccgtgcacgacgtgcagtggctggtgctcaaactcctggaa
gatgaacaacttgaggtgagggagatggctgccaccaccctcagtggcctcctgcagtgt
aacttcctgactatggacgcccccatgcagactcactttgaaaagctctgcaagacccgg
cttcccaagaggaggaaaagggacccaggctcagtggtggataccattcctccagcagac
ttggttaagcggcatgcaggtgtgcttgggctaagtgcctgtatcttatccaacccctat
gatgtgcccacgtggatgccccagcttttgatggacctgagtgcacacttgaatgatacc
caaccaattgagatgactgtgaagaaaactctctctaatttccgaaggacacaccttgac
aactggcaagaacacaagcagcagttcacagacgaccagttgctggttctcacagatctg
ctggtgtcgccgtgctattatgcataa
DBGET
integrated database retrieval system
