Polyodon spathula (Mississippi paddlefish): 121316317
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Entry
121316317 CDS
T07273
Symbol
nrxn1a
Name
(RefSeq) neurexin 1a isoform X1
KO
K07377
neurexin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121316317 (nrxn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121316317 (nrxn1a)
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
121316317 (nrxn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
121316317
NCBI-ProteinID:
XP_041107273
LinkDB
All DBs
Position
5:75519856..75914315
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AA seq
1491 aa
AA seq
DB search
MGLVVRHSGHLIWMGLLVCCLIDLGASLEFTGAEGQWARFPMWNACCESEMSFNMKTKSS
HGLLVYFDDEGFCDFLELLIHNGKLSLRFSIFCAEPAMVLSDTGVDDNNWHSVIIKRNFK
NTTLMVDREVKWVEVKSKRRDMTVFSHLFLGGIPPELRTVALRLTSAAVKDQVPFKGWIT
ELKVNSSETMLISSEGVLNVTDPCGRDNLCLNGGICSVVNKEAICDCSQTGYQGKDCSEE
DNYVEGLAHLMMGDQGKTKAKEEYVATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRN
GLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQ
HSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVS
NNFMGCLKEVVYKNNDVRLELSRLAKQGEAKMKVHGVVAFKCENVATLDPITFETPESYI
TLHKWNAKKTGSISFDFRTTEPNGLLLFSHGKPKHHKDAKNPQMLKVDFFAIEMLDGHLY
LLLDMGSGTIKTRAVNKKVNDGEWYHVDFQRDGRSGTISVNTNRTPYTAPGESEILDLDD
NLYLGGLPENKVGLIFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRRMAEIQAAAGVKPS
CSKEPAKQCLSNPCRNNGVCREGWNRYVCDCSGSGYLGRSCEREATILSYDGSKFMKIQL
PVVMHTEAEDVSLRFRSQRAYGILMATTSRESADTLRLELDAGRVRLTVNLDCIRINCNT
SKGPETIFAGYNLNDNEWHTVRVVRRGKSLKLTVDDLQPVEGQMAGDHTRLEFHNIETGI
VTERRYMSVVPSNFIGHLQGLSFNGMPYIDLCKNGDIDYCELNAMIGFKNIIADPVTFKS
KSSYVALATLQAYYSMHLFFQFKTTSSDGLILFNSGDGNDFIVVELVKGYVHYVSDLGNG
AHLIKGNSNKPLNDNQWHNVMISRDTNNLHTVKIDTKVTTQTTLGAKNLDLKGDLFVGGV
AKEMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLISDALSCVGQIDRGCEGPSTTCQEDS
CANQGVCLQQWDGFSCDCSMTSFAGPLCNDPGTTYIFGRGGGLITYTWPPNDRPSTRADR
LAVGFSTQLKDAVLVRVDSSSGLGDYLQLHIEKGNIGVIFNVGTDDIAIEEPAKFVNDGK
YHIVRFTRSGGNATLQVDDLPVIERYPTGNNDNERLAIARQRIPYRLGRVVDEWLLDKGR
QLTIFNSQTTIKIGGKDRSRPFQGQLSGLYYNGLKVLNMAVDNDPNIKIEGSVRLVGEAP
SSMTTESSATANQSETSTSIMEITTTTASSRRGKPPTREPQPTDDLLVASAECPSDDEDI
DPCEPSSGGLANPTGPGSKGFPGPSEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYR
NRDEGSYHVDESRNYISNSAQSNGTVVKEKQANSAKSSSKNKKNKDKEYYV
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgggacttgttgtgaggcatagtggtcacttaatctggatgggtcttctagtttgctgc
ttgatagaccttggtgccagtttggaattcactggagcagaagggcagtgggctcggttt
cctatgtggaatgcttgctgcgagagtgaaatgagcttcaacatgaagactaaaagttcc
catggcctcttggtgtacttcgatgatgaaggattctgtgactttctggagcttctaatt
cacaatggaaaactaagccttcgcttttcaattttttgtgccgaacctgccatggtgttg
tccgacactggagttgacgacaacaactggcattctgttatcataaagagaaacttcaaa
aacacaacgcttatggtagacagagaagtaaaatgggtggaggtgaaatccaaaagacgg
gatatgactgtttttagccatttgttccttggtgggattccgccagaattacgtactgtg
gcactgaggctaacgtcagctgcagtgaaagaccaggttccgttcaaaggatggataact
gagcttaaagtcaacagttcagagaccatgctcatcagtagtgaaggggtcctgaatgtc
acagatccttgtggcagagacaacttgtgtctgaatggtggaatctgctctgttgttaat
aaagaagcgatttgtgactgctcacagactggctaccaagggaaggactgcagtgaagaa
gacaactatgtggaaggtctggcacacctgatgatgggcgaccaaggtaaaactaaagca
aaagaggaatatgttgcaaccttcaaagggtctgaatacttctgctacgacttatcccag
aacccaattcagagcagcagtgatgaaatcacgttgtcgttcaaaacccttcagaggaat
gggctgatgctgcacacgggcaaatctgccgactacgtgaatcttgctctgaagaacgga
gccgtctctctcgtcattaatctggggtcgggggccttcgaggcgctggtggaacctgtc
aatgggaagtttaatgacaatgcctggcatgatgtcaaagtaacaaggaatcttcgtcag
cactcaggcattggacacgctatggtaaacaaactacattgttcggtaacaatatcagtg
gatggaattctgaccaccacaggatacacacaggaggactacaccatgctgggctctgat
gactttttctatgttggaggcagccctagcacagctgacctgccaggttcacctgtcagc
aacaactttatgggttgcctaaaggaggtcgtgtataaaaacaatgatgtcaggcttgag
ttgtccagactcgccaaacaaggagaagccaaaatgaaggttcatggtgttgtggcattt
aagtgtgaaaatgtggccaccttggaccctatcacgttcgagactccagagtcctatatc
acgctacataaatggaacgctaagaaaacaggctccatctcttttgacttccgcaccaca
gagcctaacgggctgctcctctttagtcatggcaagccaaagcaccataaagacgccaag
aatcctcaaatgttgaaggtggacttcttcgctatagaaatgcttgatggccatctgtac
ctcctccttgatatgggatcgggtacgattaaaacacgagctgtaaacaagaaagtgaac
gacggagagtggtatcatgtcgactttcagagagatgggcgatcaggtaccatatctgtg
aacaccaaccgcacaccatacaccgcaccaggagagagtgaaatcctagacctggatgac
aacttgtatttaggtggcttgccagagaacaaagtgggcctcatctttccaaccgaagtg
tggacggcgctactcaattacggctatgtgggttgcatcagggacctgttcattgacggt
cagagcaaagatatccggcgcatggctgaaatccaggcggccgctggagtaaagccatcc
tgttccaaagaaccggctaagcagtgtctcagcaatccgtgccggaacaatggtgtttgc
agagagggctggaacagatacgtctgtgattgctctggatccggataccttggccgatca
tgtgaaagagaagccacaatcctgagctatgacggcagtaagttcatgaaaattcagctc
ccggtggtgatgcacactgaggcagaagacgtgtccctgcgcttcaggtctcaaagagcc
tatgggattctgatggccacaacatcaagagagtctgcggacactctgcgcttggaactg
gacgcaggacgcgtgcgactcacagtcaatctagactgtatcaggataaactgtaatacc
agcaagggcccagaaaccattttcgctggctataacctcaatgataatgaatggcacaca
gttcgtgttgttcgccgaggaaagagtttgaagctgacagtggatgatttacagcctgtg
gaaggacaaatggctggagatcacacacggcttgaatttcacaacatagaaaccggcatc
gtgactgagcgacggtacatgtcagtagtgccgtccaacttcatcggccacctacagggc
ctgtcgtttaacggcatgccatacattgatctgtgtaaaaacggtgacatcgactactgt
gagctgaacgccatgattggcttcaaaaacatcatcgccgatccagtcaccttcaagtct
aaatccagctacgtggccctcgctacgctgcaagcctactactccatgcacctgtttttc
cagttcaagaccacgtcttccgacgggctgatcttgttcaacagtggagatggcaatgac
ttcattgtggtggagcttgtgaaagggtatgtacactatgtttctgacttgggcaatggt
gctcatctcatcaaaggcaactctaacaagcctttgaatgacaatcaatggcacaacgtg
atgatttcaagagatacaaacaatcttcacactgtaaagattgatacaaaagtgacaacc
caaaccacactgggagccaaaaatcttgatcttaaaggggacttatttgttggtggggtt
gccaaagaaatgtacaaagatctgcccaagctggtgcacgcaaaggagggtttccaaggg
tgcctggcttctgtggatttgaatgggcgtcttccagacctgatctccgacgcgttgtca
tgtgtgggacagattgacagaggatgcgaaggccccagtactacatgccaggaggattct
tgtgcaaaccaaggagtgtgcctccagcaatgggatggattcagctgtgactgcagcatg
acctcattcgctggtcccctgtgcaatgaccctggaactacgtatatttttggtcgagga
ggtggactgatcacttacacatggccccccaacgaccggccaagcactcgtgctgacagg
ctggctgtaggatttagcacccaattgaaagatgctgttttggtgcgggtagacagttct
tctgggctcggagactacctacagctacacattgaaaaggggaatattggagttatattt
aatgttggaacagatgacattgctattgaagaaccagctaaatttgtaaatgatggaaaa
taccatatagtacgatttactcggagtggtggcaatgccacactacaggtggatgacctg
cctgtcattgaacgatacccaacaggaaacaatgataacgaacgcctggcgattgctaga
cagcgaatcccatatcgacttggtcgagtagttgatgaatggctactcgacaaagggcgc
cagcttactatcttcaatagccaaacaactataaaaattggaggcaaggacaggagccgt
ccattccaaggccagctttctggtctttactacaatggcttgaaagtgctgaacatggca
gttgacaatgaccccaacatcaagatcgaaggcagtgtgagacttgttggggaagcaccg
tcctctatgacaacagagtccagtgcaactgcaaaccagtccgagacgtccacctccata
atggaaataacaaccaccacggcatccagtaggagagggaagccacccacaagagagcca
cagcctacggatgacctgcttgtggcatctgctgaatgtccgagtgatgatgaggacatt
gatccatgtgagccgagctcaggtgggttagcaaatcccactggacccggctccaaaggc
ttcccagggccctcggaggtgatcagagagtcgagcagcaccacaggaatggtggtgggc
atcgtggcagcagccgccctgtgcatcctcatcctcctctatgccatgtacaagtacagg
aacagagacgagggctcctaccacgtggatgagagtcggaactacatcagcaactcagca
cagtccaacgggactgtggtgaaggagaagcaggccaacagtgccaaaagttcaagcaag
aacaagaagaacaaggataaagaatattatgtctga
DBGET
integrated database retrieval system
