Polyodon spathula (Mississippi paddlefish): 121316324
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Entry
121316324 CDS
T07273
Symbol
fbxo11b
Name
(RefSeq) F-box only protein 11 isoform X1
KO
K10297
F-box protein 11
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121316324 (fbxo11b)
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121316324 (fbxo11b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
zf-UBR
F-box
Motif
Other DBs
NCBI-GeneID:
121316324
NCBI-ProteinID:
XP_041107312
LinkDB
All DBs
Position
5:76334089..76368476
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AA seq
887 aa
AA seq
DB search
MNSVRAANRRPRRVSRPRPVQPERNNGERDEEVPADMVAEESGPGAQNSPYQLRRKSLLP
KRSACPTKNNMEGASTSTTENFGHRAKRARVSGKSQDLPAAPAEQYLQEKLPDEVVLKIF
SYLLEQDLCRAACVCKRFIELANDPILWKRLYMELFEYTRPMMHPEPGKFHQINPEEYEQ
PNPWKESFQQLYKGAHVKPGFAEHFYSNPARYKGRKNMLYYDTIEDALGGVQEAHFDGLI
FVHSGIYTDEWIYIESPITMIGAAPGKVADKVIIENTRDSTFVFMEGSEDAFVGYMTIRF
NPDDKSAQHHNAHHCLEITVNCSPVIDHCIIRSTCTVKLSYVLAVGSAVCVSGQGACPTI
KHCNISDCENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVF
TFDHGMGYFESCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKI
YANNFAGVWITSNSDPTIRGNAIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRTNS
CPIVRHNKIHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQ
VGVYFYDNGHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGFIE
DNEIFDNAMAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLI
STNSHPVLRKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIM
NNQDAIEKAVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEF
IRHDRFFCDCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtcagagcagccaacagaagacccaggcgagtgtcgaggccgcgcccggta
caaccagagagaaacaacggagaaagagatgaggaagttccagcagatatggttgcagaa
gaatctggtcctggtgcacagaatagtccttaccaactccgcagaaagtctctcttacca
aaacgatcggcttgccccacaaagaacaacatggagggtgcttccacgtctactacagaa
aactttggccatcgagccaaacgtgctagagtatccggcaagtcacaagacctcccagcc
gcaccagcagagcagtatctacaagagaagctaccagatgaggtggttttgaaaatattc
tcctacctgctggaacaggatctctgtcgagcagcatgtgtgtgtaaacgcttcattgag
ttagctaatgatcccattttgtggaaaaggttatacatggaattgtttgaatatacacgt
ccaatgatgcacccagaacctggtaaatttcatcagattaaccctgaggaatatgaacag
ccaaacccctggaaagagagctttcaacaattgtataaaggagcacatgtaaagccaggg
tttgcagaacacttttacagtaaccctgccagatataaaggaagaaaaaatatgctttat
tatgataccattgaagatgcattaggaggtgtccaggaagctcattttgatggactgata
tttgttcactcgggtatctacactgatgagtggatttacattgaatcacctatcacaatg
atcggtgcagcacctggaaaagtagcagacaaagttattattgaaaacactagagattcc
acatttgtctttatggagggatctgaggatgcttttgttggttacatgacaattaggttc
aaccccgatgacaaatcagcccagcatcacaatgcacaccactgcctggagatcacagta
aactgcagcccagtaatagatcactgtatcatccgcagcacctgcacagtgaaactttct
tatgttcttgcagtgggctcagcagtttgtgttagtggccaaggagcttgtcctactatc
aaacactgtaacatcagtgactgtgaaaatgttggattatacataacagatcatgcacag
ggcatatatgaagataatgaaatctccaataacgctttagctggaatctgggtaaaaaac
cacggcaatccgatcatccgaaggaatcacattcaccacgggcgggatgttggtgttttt
acgttcgatcatggcatgggttacttcgaaagctgcaacatacacagaaaccgaattgcc
ggtttcgaggtgaaagcctacgcaaatcctactgtagtcaggtgtgaaattcaccatggg
cagactggagggatctatgtccatgaaaaaggaagaggacagttcatagagaacaaaatc
tatgcaaacaactttgcaggtgtatggataacttcgaacagcgatcccacaattaggggc
aatgccatttttaatggcaatcaaggtggagtttacatatttggagatggaagaggcctt
atagaaggaaatgacatctatggcaatgcgttagcaggcatacaaatcagaacaaacagt
tgccctattgttcgacacaacaaaattcatgatgggcagcatggaggcatttatgtgcat
gaaaagggacaaggtgtaattgaagagaatgaggtgtacagtaatactctggcaggtgta
tgggttacaacggggagtactccagtgttacggagaaacagaatacacagtggaaaacag
gtgggagtttacttctatgataatggacatggagtgctggaagataatgatatctacaac
cacatgtactcaggggtccaaatcagaactggaagcaaccccaagatcagacggaataaa
atctggggagggcagaatggtggaattctagtttacaactctggtttaggatttatagaa
gataatgagatctttgacaatgcaatggcaggggtttggattaaaactgacagtaatccc
actcttagaagaaacaaaattcatgatgggagagatggaggcatctgtatatttaatgga
ggcagaggacttcttgaagagaatgatatcttccgaaacgcacaggctggtgtcctgatt
agcaccaatagccatcctgtgttgcgcaagaacagaatatttgatggctttgcagcaggt
attgaaattacaaatcatgccacagcaacactagaaggcaatcagattttcaacaaccgg
tttggagggttatttctagcatccggtgtaaatgttacaatgaaagataacaaaataatg
aacaatcaggatgccattgaaaaagctgtaagtagaggtcagtgcctgtacaagatttca
agttacaccagctatccaatgcatgatttttacaggtgtcacacctgtaacacaacagac
cgcaatgcaatttgtgtgaactgcattaagaagtgccatcaagggcacgatgtagagttt
attagacatgataggtttttctgtgactgtggtgctggaacactttctaacccttgcacg
ttggctggagaacctacccatgatacagatactctgtatgactctgctccacctatagaa
tccaatacattgcagcacaactga
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