Polyodon spathula (Mississippi paddlefish): 121316334
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Entry
121316334 CDS
T07273
Symbol
socs5b
Name
(RefSeq) suppressor of cytokine signaling 5b
KO
K04698
suppressor of cytokine signaling 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121316334 (socs5b)
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121316334 (socs5b)
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GFIT
Motif
Pfam:
SOCS
SOCS_box
SH2
Motif
Other DBs
NCBI-GeneID:
121316334
NCBI-ProteinID:
XP_041107328
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Position
5:complement(76898422..76924192)
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AA seq
562 aa
AA seq
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MDKVGKMWNNLKNRCQNLFHPKGGSRGENMDMNINRCSLEQDGDTCLSDTSSQRLPSPLR
GICPMPLHNAARRNPNCVSEIPQIVEITIDQDSDDLRTQTGLRLARRDSYTRHSPWGSKK
KHSCSTKTQSSLETDKCFSRTRGGLQRRERKYGVSSMHDMDAASSRTLSSLSLRQRLQDT
MGLCFPIRSHSRSTKALFSTKRKIHLSELMLEKCPFPSGSDLAQKWQLIKQHTAPASPQT
TTLLDAFEPAITSTEDEEDRLRERRRLSIEEGVDPPPNAQIHSFEATAQVNSLYKLGPKL
APGMNDLTGDNRGAAAGAAAALGGAPATVVVVAAAAAAAAAAATPLQIDCDSEEDTTTLC
LQSRRPKQRHMSGDSHFSRQGPWKVHTQIDYIHCLVPDLLRITSNPCYWGVMDRYEAEAL
LEGKPEGTFLLRDSAQEDYLFSVSFRRYNRSLHARIEQWNHNFSFDAHDPCVFHSSTVSG
LLEHYKDPSSCMFFEPLLTVPLNRSFPFSLQYICRAAISRCTSYDGIGMLPLPSVLQDFL
KEYHYKQKVRVRWLEREPVKAK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggataaagtgggaaagatgtggaacaacctgaagaacagatgccaaaacttgttccac
cccaaaggtgggagcagaggtgaaaacatggacatgaacatcaaccgctgctctttggag
caagatggagacacctgtctttccgatacatcttcccaaagactgcccagcccgctgcgg
ggaatctgccctatgcccctgcataacgcagcccggaggaatccaaactgtgtctcggag
atccctcagattgtggagatcacaatagaccaggacagcgatgacctgcgcacccagaca
ggcctgcgcctggcccgccgggactcgtacacgcgacactccccttgggggagcaagaag
aaacactcgtgctctacaaagacccagagctctctggagacagacaagtgctttagcagg
acccgcggcgggctgcagcgacgggagcggaagtatggggtcagctccatgcacgacatg
gacgctgcctccagtaggactctgagcagcctctccctccggcagaggttacaggacacc
atgggactctgcttccccatccgatctcactctcgctccaccaaggctctgttttcaact
aaacggaagatccacctgtcagagctaatgcttgagaaatgccccttcccctctggctcg
gacctggctcagaagtggcaactcatcaagcagcacacggctcccgccagcccccagacg
accactctgctggatgcttttgaacccgccatcacctccaccgaagacgaggaggaccgg
ctgcgggagaggaggaggctcagcatcgaggaaggagttgacccgcctcccaacgctcag
atccactccttcgaggccacggcgcaggtgaactcgttgtacaagctgggaccaaagcta
gctccagggatgaacgacctgacaggggacaatagaggagccgctgcaggggctgcagca
gctctagggggagcaccagcgactgtggtggtggttgcagcagcagcagcagcagcagca
gcagcagcaactccgctacaaatagattgcgactcggaagaggacaccacgactctctgt
ctgcagtcacgcaggccgaagcagcgccacatgtccggggacagccatttcagccgccag
ggcccgtggaaagtccacacgcagattgactacattcactgcctcgtgccggacctcctg
cgtatcaccagcaacccctgctactggggtgtgatggaccgctacgaggccgaggcgctg
ctcgaaggcaaacccgaaggcactttcctgcttagggactctgcgcaggaggactacctc
ttctctgtcagcttccgccgctacaaccgctccctgcacgcccgcattgagcagtggaac
cacaacttcagcttcgacgcgcacgacccctgcgtgttccactcctccacagtgagcggg
ctgctcgagcactacaaggaccccagctcctgcatgtttttcgaacctctgctcaccgtg
cccctcaacagaagcttccccttcagcctgcagtacatctgtcgggcggccatctccagg
tgcacctcgtacgatggtataggcatgctccctttgccctctgtgctccaagacttcctg
aaggaatatcactacaaacagaaagtcagggtgcggtggctggagcgagaaccggtcaag
gctaaataa
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