Polyodon spathula (Mississippi paddlefish): 121316352
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Entry
121316352 CDS
T07273
Symbol
lrpprc
Name
(RefSeq) leucine-rich PPR motif-containing protein, mitochondrial
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121316352 (lrpprc)
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
121316352 (lrpprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_3
PPR_long
PPR_1
GIDA_C_1st
Motif
Other DBs
NCBI-GeneID:
121316352
NCBI-ProteinID:
XP_041107358
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All DBs
Position
5:78032081..78115462
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AA seq
1430 aa
AA seq
DB search
MAALLRSARLLSFSSPFLLQVVGATVLGGSLSRLGSRTLSGRGIGGCHGRVLIGTGVNRS
VSGSGVRLLAISAQEKGASRDESSSAVRSRQAEQFDWALNKLDSSVRRTGRITKTQLLKI
FHDMCRTGYPSGNQALLLLRSCGALLPEIHLSERTELAHRIWGKLLELGAVYDASHYNAL
LKVYLQNEFKFSPTEFLAKMETANVQPNRVTYQRLIAAYCNEGDIDGASKILGFMKSKDL
PITEAVFSSLVTGHARAGDMESAENIFTVMKGAGIEAGPDTYLALLNAYAEKGDIDNIKQ
TLEKVEKTDASLMDRDLMQIIFSLAKSGHHQYVQEIAERMRHDRGYIPDAMNLCLSLITQ
GMEDTAFQLLKTFPTLQPESHNGDTPDLGNFFLRHCVNMDKPVEKLKRFCRELQESGLHV
SALPFTLYCALDAKKTATAVELMKVMKEEGLPVRTHYFWPLLAHHQKEKNSQGTMEVLKA
MQELGVEPDVDTYTNYVLTSFDSLEIAHTKLREVGCSVETEGFAASELRSEAVNGRLESI
LAMLSSLTMPAVELSSFRGSLILGFKRSQDVDTMAKITELLHRDRRFSAAPAGSTEVVGY
FLYNLIDSMSDSEVQAREETLRQYFHQLKKMNIVISANIYRGIRNLLDSYHVPELIKDVI
VLVDEKEKLSASDLLKGPEVKVSALESKLAELKTENKPIGETLKQLILALCAEENMPKAL
ELKSQHEADMVVGGYAALINLCCRHDNVEEALNLKQEIDRKDSSVVLDVNKYLGLVKVLA
KHGKIDDVLGILKEMKEKGVAVRDASVTSFFHILNASAMRAEEEVVRSILDALFTLGLAK
PSANLCSPLVTVHLEKGDLPTALEASMDCQRKYSQMPRLHDVLCKLVEKGETELLQKAMD
FISQERGEMTMLYDLFFAFMHTGKYKEARKIIETPGLRSRPGRLQWFSEKCIAANQMETL
ENMVEMTRKLFECDRDEMYYYLTRLCKENNDWRKAEATWMKMQEENVIPRERTLRLLADI
LKSNGQEVPFEVPEAWFEEAAEMEKTKGKASSTPASLPADSPIEYQRRIMALCKKNMSGE
AYRVLSDAESKDLALHSAAYNSLIKSLLAEGNLEDAMKVKDIARSRISGFTLSDTASSLL
LITQVRRDNLKGALSMLKGMLQADQVPTQLAVTRLVQALGMKGDVESIQAVESMIKSLGQ
SINLSRMLFINNIAVAHIKNNDVDSAVQFIEPLFTPGSGGQSSGLQVSSVSFVFRKVIEE
RLEPALDKLSAMAERLANHFAAYRPATDLFLQFLDTGRTEDAKFLLQRCAGIGEQKEILV
AYITRAAQKPGQAPKIKALLDILPDFPDKELAYAYLMKCYGLDNDIAAAKALYQQMQEEH
MQPDELCLKRLALLLKSAGEPVPFTEPPESFRFYADKLRRGSSNQLSEDD
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgctcttgagatcggcccggctcctgagtttttcttccccgtttctgctccag
gtcgtcggagcgactgtccttggcggctcgctctccaggctcggtagccggactctgagc
ggcagagggatcggaggatgtcacggccgtgtccttatcggaaccggtgtaaacaggagt
gtgagtggcagcggtgtgcgtctgttggccatctccgcacaggagaagggggcgtctcgg
gatgagagcagctcggctgtgcgctcccgccaggcggagcagtttgactgggctctcaac
aagctggacagctccgtgaggaggactgggcgcatcaccaagacccagctgctcaagatc
tttcacgatatgtgccgcacaggatatcccagtggaaaccaggctctgctcctgctgcgg
agctgtggcgctctgctcccggagattcacctgtctgagcgcactgagctggcacaccgc
atttggggaaaactgctggaactgggtgctgtctatgatgccagtcattacaacgccttg
ctcaaggtctacttgcagaatgagttcaagttctccccaacagagtttctcgcaaaaatg
gagacggcaaacgtgcagcccaacagagtaacctatcaaaggttaatcgctgcatactgc
aatgagggggacatcgacggtgccagtaaaatcctgggctttatgaagagcaaagatctt
cccatcacagaggcagtgttcagctccctggtgaccggccatgccagagctggtgatatg
gagagtgctgagaacatcttcacagtaatgaagggagctggaatcgaggctggtccagac
acttacctggctctgctcaatgcctacgctgaaaagggggacattgacaacatcaagcag
accctggagaaggttgagaagacagatgccagtctgatggacagggacttgatgcagatc
atcttcagcctggccaagtctgggcaccaccagtatgtgcaggagatcgcagagcgcatg
agacacgaccgcggatacattcctgacgcgatgaacctgtgcctgagcctcatcacgcag
gggatggaggacacagccttccagctgctcaagaccttccccacattacagccggaaagt
cacaatggagacacgccagacctcggcaacttcttcctgcgccactgcgtcaacatggac
aagccggtggaaaagttgaagcgtttctgcagggagcttcaggagagcggcctgcacgtc
tcagccctgcccttcaccctctactgcgccctggatgccaaaaagacagctacggcagtg
gagctgatgaaggtgatgaaggaggaagggctgccggtgagaacgcactacttctggcct
ctccttgcgcatcaccagaaagagaagaattctcaaggtacaatggaggttctgaaggcc
atgcaggagctgggtgtggagcctgatgtggacacctacacgaactacgtgctcacctcc
ttcgacagcctggagatcgctcacaccaagctcagggaggtgggctgctccgtggagact
gaggggtttgctgcctctgagctgaggtcggaggcagtgaatgggaggctggagagcatt
cttgccatgctgtcttcactgaccatgcctgcagtggagctgagttcattcaggggaagc
ctcattctaggattcaaaaggtctcaagatgtggataccatggcaaagatcacagagctg
ctgcacagggacagacgcttcagcgcggcacctgctggatccactgaggtggttggatat
ttcctttataacctgatcgacagcatgagtgactctgaggtgcaagccagggaggagact
ctcagacagtacttccatcagctcaagaagatgaacattgtaatctctgccaatatatac
agaggtattcggaacctgctggattcgtaccatgttccagaactcatcaaggacgtcatc
gttttggtcgatgagaaagaaaagctttcagccagcgatctgctcaaaggcccagaagtt
aaagtgtctgctctggagagtaagctggcagagttgaagactgagaacaagccaatcgga
gagacactcaaacagctcatcctggccctctgtgctgaagagaacatgccgaaagccctt
gaactgaaaagccagcatgaggcggacatggtcgtcggcggctatgcggctctgatcaat
ctgtgctgtcgtcacgacaacgtcgaggaagcgctcaacttgaaacaagaaattgaccgt
aaagactcctctgtggtcctggatgtcaacaagtatttggggttggtgaaggtcctcgca
aagcacggcaaaatcgatgacgtgctcggcatcctgaaggagatgaaggagaagggcgtg
gccgtgcgggacgccagcgtcacttcattcttccacatcctgaacgcctcggccatgcgt
gcggaggaggaggttgtgcggagcatcctggacgctctcttcaccctgggcctggccaag
ccctccgccaacctctgctccccgctcgtcactgtgcacctggagaagggggacctgccc
actgcgctggaggcttccatggactgccaaaggaagtatagccagatgcctcgcctccat
gacgtcctgtgtaagctggtggagaagggcgagactgaactcctgcagaaagcgatggat
ttcattagccaggagcggggtgagatgacaatgctgtacgacctgttctttgccttcatg
cacacgggcaaatacaaggaggctcgcaaaatcattgagactcctgggctgaggtctcgt
cctgggcggctgcagtggttttctgagaagtgcattgctgccaaccagatggagactctg
gagaacatggtggagatgactcggaagctgtttgagtgtgatcgggacgagatgtactac
tatctcaccagactctgcaaggagaacaatgactggaggaaggctgaagccacctggatg
aagatgcaggaggagaacgtcatcccgcgggagcggaccctgaggctgctggctgacatt
ctgaagagcaacgggcaggaggtgccgttcgaggtgcccgaggcgtggtttgaggaggct
gcagagatggagaagacaaagggcaaagcctccagcaccccggcctccctccctgctgac
tcgcccatcgagtaccagcgccgcatcatggccctctgcaagaagaacatgagcggagag
gcgtacagggtcctgtctgacgctgagagcaaagacctggctctccactctgctgcctac
aacagccttatcaagtctctgctggccgaaggcaacctggaggatgccatgaaggttaaa
gacatagccaggagccgaatctcaggcttcactctgagcgacacggccagcagcctcctc
ctcatcacccaagtgaggcgggacaatctgaaaggtgccctgagcatgctgaaggggatg
ctgcaggccgaccaggtccccacgcagctggctgtcaccaggctggtccaggcactgggg
atgaagggagacgtggagagcattcaggcagtggagagcatgattaaaagcctgggacag
tccattaatttatcacgcatgcttttcatcaataatatagctgtcgcacacatcaagaac
aatgatgttgactctgcagtgcagttcattgagcccctgtttactccggggagcggaggt
cagagttcagggctgcaggtcagcagtgtatccttcgtgttcaggaaggtcattgaagag
aggctggagcctgctttggataagttaagcgccatggcagagagactggcaaaccacttt
gctgcgtacagaccagccacagacctcttcctgcagttcctggacaccggcaggactgaa
gacgccaagttccttctgcagagatgtgctggtataggagaacaaaaggagatcttggta
gcctacatcaccagggcagcacagaagcctggccaggctccaaagatcaaagctctgctt
gacatcttacccgacttccctgacaaggagctggcttacgcctacctcatgaagtgctat
gggttagacaatgacatcgctgcagccaaggctctgtaccagcagatgcaggaggagcac
atgcagcctgacgagttgtgcctgaagagactggccctgctgctgaagagcgctggggag
cccgtccccttcacagagcccccggagagcttcaggttttacgcagacaagctgagacga
ggcagcagtaaccagctctcagaggacgactag
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