Polyodon spathula (Mississippi paddlefish): 121316387
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Entry
121316387 CDS
T07273
Name
(RefSeq) chitin synthase chs-2-like
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00520
Amino sugar and nucleotide sugar metabolism
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
121316387
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121316387
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
121316387
Glycosyltransferases [BR:
pspa01003
]
Polysaccharide
Structural polysaccharide
121316387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
121316387
NCBI-ProteinID:
XP_041107399
LinkDB
All DBs
Position
5:complement(26630563..26643497)
Genome browser
AA seq
1378 aa
AA seq
DB search
MEEQKDRSKKREKRHEETWDPFQLNPIGAEKERKRRGFVFLQHLFAFFVGLLVLGSAFIS
KGSLLVLTTMASENSLIKKDRAFHLLMVACSLAVPNVLLFLKSLWKCAFKSCVAPKIKTV
LVICLIESFVSFGTSLLALVAMPHFDILTSLFILGSVCFFSSIFQAAFHLQKKAWKIIFP
ICSVVFVLAGYILLGLDYYIRTTSTITNGNSSKDYLYVGLGIFASILVSLNWWENSFQAS
DKPHNTLIELEGFRDFVFVISSILRTAVIGIVFAVYITIEGVDWSVFSNVPADTVQRGVG
LFLLQAFASAVCHWFGVVSCKIHAVRCSFALPIVLTTPAVVIAFVASFLVQFSNILENNI
NATIGGFCSDFYDYKLMDTSKLVLDEISNSICHTSVRYNEPWGPAVMGLEGLCWWVGLLC
STYYIWTQKFQRIERTSQIFVRRLYEAAFIDQSLLLNTRIIKERKQESGKKVENCVIYLC
ATMWHETYDEMLKILTSMFRLDRYRGDVKEQHKDKFDFECHIFVDDSFEKDTCHVNKYVK
DLVSVVIEVYRVFTNKEPDEVSIFETPYGGRLTCILPEGNMLYIHLKDKQLIRNKKRWSQ
IMYMYYLLGWKGYIANNPQRLQTVVNPCRASLISMNGNAFILPHDENNRRKNISDDNTFI
MALDGDTDFHPSALILLLDRLRMYQNVGAACGRIHPTGMGPMVWYQKFEYAVGHWLQKTA
EHVFGSVLCSPGCFSLFRGSALMDDNVLKRYTTTATKASEYVQYDQGEDRWLCTLLLQQG
WRVEYNAASDAYTNAPQEFNEFYNQRRRWGPSTLANTLDLLHSGAETSKRNSSISRAYIF
YQIFTVGSSILGPASVCLMIAGAFSFVFNWNANFAILLSVIPPAVYIIICYTTKPSFQLA
VAAILSVLYAFLMTATFLSIIGQMVEEKTFITPSGLFLVSASILYVTTAILHPQEFGLLI
YGLMYVICIPSGYLLLAIYSMVNLHIVSWGTRESTSEVGKKKTMGVVCDKRCTMCCWDIK
IEVNQETKNVVLQQLQQTIQQKNLNKQQNINNLQEIQLQTLPHGNEAARSKSENSDDEYE
NDKENHNHFEVEDEEQEQEEDRQQDGMQDIPESVWIKPVQEEFLKKLTYANLKRNLAEQI
KHVLRDKRYKDVCDELVLMLTDTLNQELYGTVGPEDILPDNLIEELKESLYFSARRILAM
DEMEILEMRIKRAIEKTLMAPQVEKLLDEENVFWIKLIERYLEPLSEDQTHKEEVKRELK
SLRNKATFLYFIVNVLWVVATFFLQAIGEAISIKIPKVYPNGTVTNEYLNVEPIGLMFLL
TFAVLLIVQFLAMLYHRVYTLIHVVSYRSKEKDYNTKDSDDEGKDGLTISNNLSPILL
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcaaaaagatagatcaaaaaaaagagaaaaaagacatgaagagacctgggat
ccttttcagctaaatccaattggtgccgaaaaagaacgtaaaagaagaggttttgttttt
ttgcagcatctgtttgctttctttgttggacttttagttctgggctctgcgtttattagt
aagggttccctgctagttcttactacaatggcaagtgagaattctttgattaaaaaggac
agggctttccacctccttatggttgcatgcagtttagccgtaccaaatgtgctgctattt
ctgaaatcactttggaaatgtgcattcaagagctgtgtggcacctaaaattaaaacagtg
cttgtgatatgcctgattgaatcctttgtgtcatttggtacttcactccttgcactagtt
gcaatgccccattttgatattctgaccagcctgttcatattaggcagcgtttgttttttc
tcatcaattttccaggcagcattccatttacagaagaaagcttggaaaataatttttcca
atttgttctgttgtgtttgtgttagccggctacattcttttaggactagattattatata
cgaacaacatcgactattactaatgggaattcatcaaaggactatttgtatgttggtctt
ggtatatttgcatctatcctggtgtctcttaactggtgggaaaattcattccaagctagt
gataaaccgcataataccctgatagagttggaaggattcagagactttgtatttgtgatt
tctagcattctgaggacagctgttattggcatagtgtttgcagtatatatcacaattgaa
ggtgttgattggtcagttttcagtaacgttccagctgatactgtccaacgaggtgttggc
ctttttctattgcaagcttttgcctctgctgtgtgccactggtttggggtggtgagctgt
aaaatacatgctgtccgctgcagctttgctctccccattgtgctaacaacacctgcggta
gtcattgcatttgtggcatcattcttggtgcagtttagcaatatccttgaaaacaatatc
aatgccaccattggagggttttgctcagatttttatgattacaaacttatggacacttca
aagctggtcttggatgaaatctccaatagcatttgccatacatcagtacggtataacgag
ccctggggccctgcagtaatggggctagaaggtctgtgctggtgggtcgggctgttgtgt
tcaacctactacatttggactcagaaattccagagaatagaacggacatctcagatattt
gttcgccgactctatgaagctgccttcatcgatcaatccttacttttaaacaccaggatc
atcaaagagagaaaacaagagagtggtaaaaaagttgaaaattgcgtaatttacctctgt
gcaacaatgtggcacgaaacttacgatgaaatgttaaagatcctcacatcaatgttcagg
ttggacagatataggggtgatgtgaaagaacaacataaagataagtttgattttgaatgc
catatatttgtggatgattcatttgagaaagatacctgccatgtcaacaaatacgtgaaa
gatcttgtcagtgttgtaatagaagtttacagggtatttaccaataaggagcctgatgag
gtgtcaatatttgaaacaccatatggaggacgattaacctgtatacttccagaaggaaat
atgttatatatacatctgaaggataaacagttgatccgtaacaagaaaagatggtcgcag
attatgtacatgtactatttgcttggatggaaaggctatattgctaataatcctcaaaga
ttgcagacagtagttaacccctgtcgagcaagtcttatatcaatgaatggaaatgccttc
attttgcctcacgatgaaaataacaggagaaaaaatatatcggatgataacacatttatc
atggctttggacggggatactgactttcatccatcagctttgatcttgctgttggaccga
cttcgaatgtatcaaaatgtaggagcagcttgtggaagaatacaccctactggaatgggt
cctatggtgtggtatcagaaatttgagtatgctgtgggccactggctccagaagacagct
gagcatgtttttggttctgttctctgcagtcctggatgcttcagtttatttaggggatca
gcacttatggatgacaatgttcttaaacgatatacaactaccgcaactaaagcctcggaa
tatgtccagtatgatcaaggcgaggatcgctggctgtgcacactgcttcttcaacaaggc
tggcgagttgagtacaatgcagcttctgatgcctacaccaatgctcctcaggaatttaat
gagttttacaaccaaagacggcgctggggaccctcaacgctggccaataccctggacctc
ctgcacagtggtgcagaaacatctaaaaggaacagctcaatttccagagcgtacatattt
taccaaatattcacagttggttcgtccattctgggacctgcttctgtttgtttgatgata
gcaggtgccttttcttttgtgttcaattggaatgcaaactttgctattttattaagtgtt
attcctcctgctgtctacatcataatttgctacacaaccaaaccttcattccagctggca
gtggctgcaattctgagtgtattgtatgcctttctgatgactgcaaccttcttgtctatt
ataggtcaaatggtagaagagaagacctttatcacaccatcaggcctgttccttgtgtca
gccagcattttatatgtaacgacagcaatcctccatccccaggagtttggtctacttatt
tatggcctgatgtatgtaatctgcatcccaagtgggtacctgctgttagctatatattca
atggtcaacctccacattgtgtcatggggtaccagagagtccaccagtgaggtgggaaaa
aagaaaactatgggtgtggtgtgtgacaagaggtgcacaatgtgctgctgggatataaaa
atagaggtcaatcaagagactaagaatgtggtcttacaacaactccaacagacaattcaa
caaaaaaatctaaacaaacaacaaaatataaataatctgcaagaaatccaactccagacc
ctcccacatggaaatgaggcagcacgttccaaaagtgaaaactctgacgatgaatatgaa
aatgacaaagaaaatcacaatcactttgaggttgaggatgaggagcaggagcaggaggag
gacaggcagcaggacggaatgcaagatatacctgaaagtgtttggattaaaccggttcaa
gaagaattcctaaaaaaacttacttacgctaacttgaaaagaaacctggccgagcaaata
aagcatgtgctgagagacaaaaggtacaaagatgtgtgtgatgaattggttctcatgcta
acagacactttgaatcaagaactatatggcacagtaggtccagaagatatattacctgac
aatttgatagaagaacttaaggagtccctatatttttccgcaagaagaattctggcaatg
gatgaaatggaaattctggaaatgagaataaaaagagctattgaaaaaaccctaatggct
cctcaggtggaaaaactacttgatgaagaaaatgtcttttggataaagttaattgaaaga
tacttggaacctttgtcagaggaccaaacccataaagaagaggttaaaagggagctgaaa
tcacttagaaacaaggcaacatttctttacttcattgtcaatgtcctctgggtggttgct
acatttttccttcaagccattggggaagctatcagtatcaagattcccaaagtctatccc
aatggcacagtcacgaatgaatatcttaatgtggagcccatcggattgatgtttctgctg
acttttgcagtgctacttattgtgcagtttttggcaatgctgtatcacagggtatatacc
cttattcatgtggtatcctacagaagtaaggaaaaagattacaataccaaggactctgat
gatgaaggtaaagatggattgacaatttctaacaacctctcacctatcttactatag
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