Polyodon spathula (Mississippi paddlefish): 121316498
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Entry
121316498 CDS
T07273
Name
(RefSeq) homeobox protein SIX3-like
KO
K19473
homeobox protein SIX3/6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121316498
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
121316498
BRITE hierarchy
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GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
121316498
NCBI-ProteinID:
XP_041107467
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Position
6:1858266..1865805
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AA seq
294 aa
AA seq
DB search
MVFRSPLELYPSHFFLPNFADRSVLVASSATSARSQEELSMFQLPTLNFSPEQVASVCET
LEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFT
KDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTR
SLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAMGQN
GIRSLSESGCTPHSSAESPSTAASPTTSVSSMAERVDTGTSILSVTSSDSECDV
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggttttcagatcccctttagagctttatccctcccatttcttcctgccaaacttcgct
gatcgctctgtgctcgttgcgagcagtgcaaccagcgccagatcccaagaagagttgtca
atgtttcagctacccaccctcaacttctctccggagcaagtggcaagcgtctgcgagacg
ctggaagagacgggagacatcgagaggctgggacgcttcctctggtctctgccggtggca
ccgggggcatgcgaggcgatcaacaagcacgagtccatcctgcgcgcccgagccgtggtg
gccttccacaccggtaatttcagagacctgtaccacatcttggagaaccacaagttcacc
aaggactcccacggcaagctacaggccatgtggctggaagcccactaccaagaggccgag
aagttgcggggccgcccccttggtccggttgataagtacagagtgcggaagaagttccct
ctccccagaactatctgggacggggagcagaagacccactgtttcaaagagaggacacgc
agcctgttaagagagtggtacctccaagacccctaccccaatcccagcaagaaaagggaa
ctggctcaggccacgggactcacccctacacaagtggggaactggtttaaaaatcgcagg
cagagagacagagcggcagctgccaaaaacagacttcagcaccaagcaatgggacagaac
ggcattcgttcgttgtcagagtccgggtgtaccccacacagctcggccgagtccccgtcc
accgcagccagtccgaccaccagtgtatccagcatggcagagcgagtcgacacggggaca
tcgatcctttcagtaacctccagcgactctgaatgtgatgtatga
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