Polyodon spathula (Mississippi paddlefish): 121316646
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Entry
121316646 CDS
T07273
Name
(RefSeq) chitin synthase chs-2-like
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00520
Amino sugar and nucleotide sugar metabolism
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
121316646
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121316646
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
121316646
Glycosyltransferases [BR:
pspa01003
]
Polysaccharide
Structural polysaccharide
121316646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
DUF2357
Motif
Other DBs
NCBI-GeneID:
121316646
NCBI-ProteinID:
XP_041107621
LinkDB
All DBs
Position
6:complement(13974123..13993407)
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AA seq
1409 aa
AA seq
DB search
MEEQKDRSEQRQERHGDTWDPFQLNPIGAEKESKKRGFVFLQHLFALFVGLFVLVSAFFS
KGSLLVLTTMASEKSLLEKDRAFYLLMVACSLAVPNVLLFLKSLWKCAFKNFVAPNIKTM
LVICLIESLVSFGTSILALVAMPYFDILTNLFILGSVCFFSSVFQAAFHLQKKAWKIIFP
ICSVVFVLSGYILLGLDYYIRKTSTVANGNSQNDYLYVGLGIFATILVSLNWWENSFQAS
DKLHNALTELEGFRDFVFVLSSILRTAVIGMVFAICITVEGVHWSVFSKFPADTVHRGVS
ILMVQAFASAVCHWFGVVGCKIHAVRCSFALPVVLTTPAVVIAFVVSFLMQFNNFLKNNI
NATIGGFCANFYNYKLMNTSKLVLDEISNSICRTSVRYSEPWGPAVMGLEGLCWWVGLLC
STYYIWTQKFQRIERTTQIFVRRLYEAAFIDQSLLLNTRMKIIKVRKQESNEKVESCVIY
LCATMWHETFDEMLKILTSMFRLDRYRGDPKEQHKDNIDFECHIFVDDSYDKDNNVNKYV
KDLVSVIIEVYRVFTNKEPDDVSIIETPYGGRLTCILPEGNMLYIHLKNKQLIRNKKRWS
QIMYMYYLLGWKGYIAKNPQRLRTVVNPCRASLVSMNGNAFILPQDENDSKRKNISDDNT
YIMALDGDTDFHPSALILLVDRLRMYQNVGAACGRIHPTGMGPMVWYQKFEYAVGHWLQK
TAEHVFGSVLCSPGCFSLFRGSALMDDNVLKRYTTTSTKAGEYVQYDQGEDRWLCTLLLQ
QGWRVEYNAASDAYTNAPQEFNEFYNQRRRWGPSTLANTLDLLHSGAETSKKNSSISSLY
IFYQIFTVGSSILGPASVCLMIAGAFSFVFNWDANFAILLSVLPPAVYIIICYTTKPAFQ
LAVAAILSVLYAFLMTATFLSIIGQMVEEKTFITPSGLFLVSASILYVTTAILHPQEFGL
LIYGLMYVICIPSGYLLLAIYSLVNLHIVSWGTRESTSEVAKEKTMGVVCDKRCTMCCWD
IKIEVNQETKNVVLQQLQQTVQPKNKNKQQNLNNLQELQLQTIPQDGNEAAPLKRPSEYR
LAGQHDPSPPPSDKSEDQYEKEKHVRFRDLDEDQDQGQDQDQDQGQDQNEDQIEDLPENV
WIKPIKEEFLKKLTYANLKRNLAAQIKHALRDKKHEDVCDELVLMLTDTLNQELFDTVGP
EDILPDSLVEELRESLNDCARRILVMNQVETLQKRVRRAIEKTLMAPQVEKLPDEERDFW
VKLIERYLEPLSEDKAHKEEVKRELKSLRNKATFLYFIVNILWVVATFFLQAIGEAISIK
IPKIYPNGTVADEYLNVEPIGLMFLLTFAVLLFVQFLAMLYHRVYTLIHMVSYRTTEKEY
ATKDSDDEDELTIANKIPSMFSIEDDIPM
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcaaaaagatagatcagaacaaagacaagaaaggcacggagatacatgggat
ccatttcagctaaatccaattggtgccgaaaaagaaagcaaaaaaagagggtttgttttt
ttgcagcatctgtttgctttgtttgttggactctttgtcctggtctctgcgttttttagc
aagggttccctactagttcttactacgatggcaagtgagaagtcgttgcttgaaaaggac
agggctttctacctccttatggtggcatgcagtttagcagtaccaaatgtgctgctattt
ctgaaatcactttggaaatgtgcattcaagaactttgtggcacctaacattaaaacaatg
cttgtgatatgtctgattgaatcccttgtgtcattcggtacttcaattcttgcattagtt
gcaatgccctattttgatattctgaccaacctgttcatattaggaagcgtttgttttttc
tcatcagttttccaggcagcgttccatttacagaagaaagcttggaaaataattttccca
atttgttctgttgtgtttgtgttatccggctacattcttttaggactagattattatata
cgaaaaacatcaactgttgctaatgggaattctcaaaatgactatttatatgttggtctt
ggtatatttgcaaccatcttggtatcccttaactggtgggaaaattcattccaagccagt
gataaactgcataatgccctgacagagttggaaggattcagagattttgtatttgtgctt
tctagcattttaaggacagctgttattggcatggtgtttgcaatatgtatcacagtggaa
ggtgttcattggtcagttttcagtaagtttccagctgatacagtccatcgaggcgtcagc
attttaatggtgcaagcatttgcctctgctgtgtgccactggtttggggtggtgggctgt
aaaatacatgctgttcgctgcagctttgctctccctgttgtgttaacaacacctgcagta
gtcattgcatttgtggtgtccttcttgatgcagttcaacaatttccttaaaaacaatatc
aatgccactattggagggttttgcgccaatttctataattacaaacttatgaacacttca
aagctggtcttggatgaaatctccaatagcatttgccgtacatcagtacggtatagcgag
ccctggggccctgcagtaatggggctggaaggtctgtgttggtgggttgggctgttgtgt
tcaacctactacatttggacgcagaaattccagagaatagaaagaacaactcagatattt
gttcgccgactctatgaagctgccttcatcgatcaatccttgcttttaaacaccaggatg
aaaatcatcaaagtgagaaaacaggagagtaatgaaaaagttgaaagttgcgtaatttat
ctctgtgcaacaatgtggcacgaaacctttgatgaaatgttaaagatcctcacatcaatg
ttcaggttggacagatacaggggcgatccaaaagaacaacataaagataacattgatttt
gaatgccatatctttgtggatgattcatatgataaagataataatgtcaacaaatatgtg
aaggatcttgtcagcgttataatagaagtttacagggtgtttaccaacaaggaacctgat
gatgtgtcaataattgaaacaccgtatggaggacgattaacctgtatacttccagaagga
aatatgttatatatacacctgaagaataaacagttgatccgtaataagaaaagatggtca
cagattatgtacatgtactatttgcttggatggaaaggctatattgcaaagaatcctcaa
agattacggacagtagttaacccctgtcgagcaagtctggtatcaatgaatggaaacgcc
ttcattttgcctcaagatgaaaatgatagcaagagaaaaaatatatcagatgataacaca
tatatcatggcactggacggggatactgactttcatccatcagctttgatcttgctggtg
gaccgacttcgaatgtatcagaatgtaggagcagcttgtggaagaatacaccctactgga
atgggtcctatggtgtggtatcagaaatttgagtatgctgtgggccactggctccagaag
acagctgagcatgtctttggttctgttctctgcagtcctggatgcttcagtttatttagg
ggatcagcacttatggatgacaatgttcttaaacgatatacaactacctcaactaaagcc
ggggaatatgtccagtatgatcaaggggaggaccgctggctgtgcaccctgcttctacaa
caaggctggcgagttgagtacaatgcagcttctgatgcctacaccaatgcccctcaggag
tttaatgagttttacaaccaaagacggcgctggggaccctcaacactggccaataccctg
gacctcctgcacagtggcgcagaaacatccaaaaaaaacagttcaatttccagcttgtac
atattttaccagatattcacagttggttcgtccattctgggtcctgcctctgtttgtttg
atgatagcaggtgccttttcttttgtgttcaattgggatgcaaactttgctattttatta
agtgttcttcctcctgctgtctacatcataatttgctacacaaccaaacctgctttccag
cttgctgtggctgccattttgagtgtattgtatgcctttctgatgactgcaacattctta
tctattataggtcaaatggtagaagagaagacctttatcacaccatcaggcctgttcctt
gtgtcagccagcattttatatgtaacaacagcgatcctccacccccaggagtttggccta
cttatttatggtctgatgtatgtaatctgcatcccaagtgggtacctgctgttagctata
tattcactggtcaacctccacattgtgtcatggggtaccagagagtccaccagtgaggtg
gctaaagagaaaactatgggtgtggtgtgtgacaagaggtgcacaatgtgctgctgggat
ataaaaatagaggtcaatcaggagactaagaatgtggtcttgcaacaactccaacaaacg
gttcaaccaaaaaataaaaacaaacaacaaaatctgaataacctgcaagaactccagctc
cagaccatcccacaagatggaaacgaggcagcacctttgaaaaggccgtcagaatatcga
cttgccggacaacacgacccctctcccccacccagcgataaatctgaagaccagtatgaa
aaagaaaaacacgttcgctttagggatctggatgaggatcaggatcagggtcaggatcag
gatcaggatcagggtcaggatcagaatgaggatcaaattgaagatctacctgaaaatgtt
tggattaaaccaattaaagaagaattcctaaagaaacttacttacgctaacttgaaaagg
aacctggcagcacaaataaagcacgcgctcagagacaaaaagcatgaagatgtgtgtgat
gaattggttctcatgctaacagacactttgaatcaggaactatttgacacagtaggtcca
gaagatatattacctgacagtttggttgaagaacttagggagtccctaaatgattgcgca
agaagaattctggtaatgaatcaagtggaaactctgcaaaagagagtaagaagagctata
gaaaaaacactgatggctcctcaggtggaaaaactacctgatgaagaacgtgacttttgg
gtaaagttaattgaaagatacctggaacctttgtcagaggacaaagcccacaaagaagag
gttaaaagggagctgaaatcacttagaaacaaggccacatttctttacttcatcgtcaat
atcctgtgggtggttgctacatttttccttcaagccattggggaagccatcagtatcaaa
attcccaaaatctatcccaatggcactgttgcagatgaatatctcaatgtggagcccata
ggattgatgtttctgctgacatttgcagtgctactctttgtgcagtttttggcaatgctg
tatcacagggtatatacccttatccatatggtatcctacagaactactgaaaaagaatac
gcgaccaaggattctgatgatgaagatgagctgacaattgctaataaaattccatctatg
ttttctatcgaggatgacatcccaatgtga
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integrated database retrieval system
