Polyodon spathula (Mississippi paddlefish): 121316680
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Entry
121316680 CDS
T07273
Name
(RefSeq) S1 RNA-binding domain-containing protein 1-like isoform X1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
HHH_9
S1
HHH_7
YqgF
TEX12
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
121316680
NCBI-ProteinID:
XP_041107669
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Position
6:complement(2029360..2126154)
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AA seq
1004 aa
AA seq
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MMRRPRVTVCKKQYSDDEDESLLNTSTEYEDKKEEEEEWVPESKVTKPRKKPAKPKEPKP
PKPPKPPKAPKKTAAEKPNAGRKTKASALEKDAGVVGVPVKEERLSLIVSERNHNETEQY
KGAQVKEAASTKCPQNENQGTHAELKHDLAYLPEGPSSSSQLPGVKREEPEDDFTFNEPA
LKKMKTAGCPDGKPVKHYKKDNGSLGDVQMNWDFIEVLSERTVVDPWVCANIVNLFKEEN
TIPFIVRYRKELINHMDADAVRDVQLTVEELRNVAKKVHAVIQTLKKEGTLTISLEKALL
NCKSVDELEHVYGPYKKGSKLSKARRARQLGLEPPALALVESPQTLNLHSYIQPQSEGLS
TLAEVEAGVQQILADMIAKDKETLVFVKRLCEQNYVTIHSTVSKTALKEQKDEKGAKPKD
IDKFQLYADFTASIKNIHHHQILAINRGENLKILTVKINIPDRVKNEFIRWCLNVRWRPK
GYARDELFKLLKDAVEDSYKRLIQPLLCRGFRSSLTTSAEKESIAMFARNLRQLLLTGPV
RGRVIMGVDPGYRHGCKLAVLSPTSQILHTDVVYLHGGNGFREAEKIRHLLRKYNCSTLV
IGNGTACRETEAYFADLIAKKYFEPLDVTYCITSEAGASIYSVSPEAVKEMPDLDPNLRS
AVSIGRRVQDPLAELVKIDPKHIGIGTYQHDVSQPLLKAALASVVEECVSFVGVDINICS
ETLMRHVAGLNAGRAKNIMEWREKNGPFINRGQLKEVKGVGPTTFQQCAGFIRINPENIC
SSEQSAGEAGGQTSAAGVPSTAGAGGAAGKPPSKKSKSRTTSSAAQQLNPLDQTCIHPES
YDIAMRFLVLTGGSLHDIGKPGMQSKVNALIQKEGMEEVAQKLNTALPTLQIIIDGLTQP
QGFDIRQGFDTPDFKRGIVSINDLKQGTVLTGRVENAALFGAFVDIGVGRSGLIHKKYIT
EAKLPRDERRRSLALGPGEKVEVRVLNVDVARDRISLDLIRVLR
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgaagacctcgcgtgacggtgtgcaaaaagcaatactcggacgacgaggatgag
tcactgttgaacacaagtacagaatacgaagacaaaaaggaggaggaggaggagtgggta
ccggagagcaaagtgacgaaacccagaaagaaacctgccaaaccgaaagagcccaaaccc
ccaaagccacctaaacccccaaaagcacccaaaaaaacagctgctgaaaaacccaatgca
ggaagaaaaacaaaagcgtcagctctggaaaaagatgcaggtgtggtcggggtgcctgtg
aaagaagagagactgtcacttattgtcagtgaaagaaaccataatgaaactgagcagtac
aagggtgctcaggtgaaagaagcagcaagcacaaaatgtccacaaaatgaaaatcaggga
acacatgcagaactgaagcatgatttggcatatctccctgaaggaccttcgtctagtagt
cagctgcctggtgttaagagggaagaacctgaagatgatttcaccttcaacgagccagct
ttaaaaaagatgaaaactgctgggtgccctgatggcaaaccagtaaaacattataaaaag
gacaacggcagtcttggagatgtgcagatgaactgggatttcattgaggtgttgtctgaa
agaacggttgtagatccatgggtttgtgcaaacatagtgaacctgttcaaagaggagaac
acaatcccattcattgtgcgctacaggaaggagctcatcaatcacatggatgctgatgca
gtgcgagacgtgcagctcactgtggaggagctacgaaatgtagcaaagaaggtccatgca
gtgatacagactctgaagaaggaggggactttaacgatcagtctggagaaggctctcctg
aattgcaaatcagtggatgagttggaacatgtgtacggtccttataagaaaggcagcaag
ctgtcgaaggccaggagagcgagacagctgggcctggagcccccggccctggctctggtg
gagtctcctcaaactcttaatctacactcctacatacagccccagagtgaaggcctgtca
acgctggctgaagttgaggctggagttcagcaaatcttggcagacatgatcgccaaggac
aaagaaacattggtctttgtaaaaagattatgtgaacagaactatgtaaccatacattcc
acagtatcaaagactgcattgaaggaacagaaggatgagaaaggggccaagccaaaagat
attgataaatttcaactttatgctgattttactgccagcatcaaaaacatccatcatcac
cagattctggccattaaccgaggggagaatctgaagatcttgacagtgaagattaacatt
cctgacagggtgaagaatgagtttatcaggtggtgtctgaacgtaagatggagaccaaag
ggatacgcaagggatgaactctttaaactattaaaagatgctgtggaagattcatataaa
aggcttattcaaccattgctatgtagaggttttaggtcgagtttgacaacgagtgcagag
aaggagtccatcgcaatgtttgcaagaaacctgcgtcagctgctacttactggaccagtt
agggggcgagtcataatgggggtggaccctggatacagacacggctgcaagctggcagta
ctgtcgcccacaagccagattctacatacagatgtggtctatttgcatggagggaatgga
tttcgtgaggctgaaaagattaggcatctgctgagaaaatacaattgttccactcttgtc
atcgggaatgggaccgcctgccgggaaacggaagcttattttgctgacctcatcgcaaag
aagtattttgagccactggatgtgacgtactgcatcaccagtgaagctggagcctctata
tacagtgtcagtccagaagctgtgaaggaaatgccagaccttgaccctaatttaagaagc
gcagtttccattggacgtcgagtacaagacccattagctgagctggtgaaaattgaccca
aaacacattggaataggaacctaccagcatgacgtgtcgcaacccttgctgaaagcagct
ctggccagtgtggttgaagaatgtgtcagctttgttggagtggatattaacatctgctct
gaaaccctgatgaggcatgttgcagggctcaatgctggtagagcaaagaacatcatggag
tggcgtgagaagaatggaccatttataaaccgcggacagctgaaagaagtcaaaggtgtg
ggtccaacaacctttcagcagtgcgctggtttcatacgaattaacccagaaaacatttgc
agcagtgagcagagtgccggcgaggcgggaggtcagacatccgcagcgggtgtcccgagc
acagcaggtgcggggggggcagctgggaaaccacccagcaagaagagcaagagcagaaca
acaagcagcgctgcccagcagctaaacccactggatcagacctgcatccaccccgagtca
tacgatattgccatgaggtttcttgtgctcactggtggaagtctgcatgacataggcaag
ccaggaatgcagtccaaggtgaatgcattaatccagaaagaagggatggaagaagttgct
caaaaactaaacacagcacttccaaccctgcagatcatcatcgatggcctgactcagcca
caaggctttgacattcgacaaggttttgacacacctgacttcaagcgaggcattgtttca
ataaacgatctgaaacagggcactgtgctcacaggaagagtggaaaatgctgcccttttt
ggagcttttgtggacataggagtgggccgatcaggcctgatccataagaaatacatcaca
gaggccaagctgccccgtgacgagaggcggagaagcttggcactcggccctggggagaag
gtggaggtcagggtgctcaacgtggacgtggccagagaccgaatcagcttggatctcata
cgggttttgagatag
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