Polyodon spathula (Mississippi paddlefish): 121316816
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Entry
121316816 CDS
T07273
Name
(RefSeq) protein transport protein Sec23A
KO
K14006
protein transport protein SEC23
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121316816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121316816
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121316816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
APP_E2
Motif
Other DBs
NCBI-GeneID:
121316816
NCBI-ProteinID:
XP_041107969
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Position
6:9376705..9387680
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AA seq
766 aa
AA seq
DB search
MATYQEFIQQNEDRDGVRFSWNVWPSSRLEATRMVVPLSCLFTPMKERPDLPPVQYEPVL
CSRPTCKAVLNPLCQVDYRAKLWACNFCFQRNPFPPAYAGISEGNQPAELMPQFSTIEYI
VQRGPQTPLIFLYVVDICLEEEDLQALKESLQMSLSLLPPNALVGLITFGRMVQVHELSC
EGISKSYVFRGTKDLSAKQIQEMLGLTKPAAPIQQGRPAQPQDHSFSSRFLQPVHKIDMN
LTDLLSELQRDPWPVPQGKRPLRSTGIALSIAVGLLEGTLPNTGARVMLFTGGPPTQGPG
MVVGDELKTPIRSWHDIEKDNAKHLKKATKYYEALASRSAVNGHCIDIYACALDQTGLLE
MKCCSNLTGGHIVMGDSFNTSLFKQTFQRVFSKDYNGEFRMAFGGELEVKTSRELKISGA
IGPCVSLNAKGPCVSETELGLGGTSQWKICGINQFTTLGMYFEVVNQHNAPVPQGSRGAI
QFITQYQHSSTQKRIRVTTVARNWADAQSQIQHIEAAFDQEAAAVLMARLGVFRAESEEG
PDVLRWLDRQLIRLCQKFGQFHKDDPNSFRLSESFSLYPQFMFHLRRSPFLQVFNNSPDE
SSYYRHHFVRQDLTQSLIMIQPILYSYSFYGPPEPVLLDSSSILPDRILLMDTFFQLVIY
HGETIAQWRKAGYQEMTEYENFKQLLQAPLDDAQEILQTRFPMPRYVDTEHGGSQARFLL
SKVNPSQTHNNLYAWGQETGAPILTDDVSLQVFMDHLKKLAVSSAS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtaccaggagtttatccagcagaacgaggacagggatggtgtgcgcttcagc
tggaacgtgtggccctctagtcgactggaggccaccaggatggtggtgcccctctcctgc
cttttcacacccatgaaggagcgtccagacctccctccagtccagtatgagcctgtgctt
tgcagcagacccacctgcaaggcagtcctcaacccactctgccaagttgactacagagcc
aaattatgggcgtgtaacttttgtttccagagaaatccgtttccccctgcatatgctggg
atatcagaaggcaaccagccagcagaattaatgccacagttttctaccattgaatacatt
gtacagcgtggcccccagacccctctgatcttcctttatgttgtggacatatgcttggaa
gaggaggaccttcaggctttgaaggagtccttacagatgtctctgagtctcttgcctccc
aatgccctggttggcctgattacttttggcagaatggtgcaggtccacgagctgagctgc
gagggtatctccaagagctatgtgttcagaggaacgaaggacctgtcagcaaaacagata
caggaaatgttgggtctcactaaaccagcagcaccaattcagcaaggaagacccgcacag
cctcaggatcactccttctccagcaggtttttgcagcctgtgcataagatcgacatgaat
ttgacagacctccttagtgagcttcagagggacccctggcctgtgccacagggaaaacgg
cccttgcgatctactggcattgccttgtctattgctgtgggcctgcttgagggcactctg
ccaaacacaggagctcgtgtaatgctcttcactggtggccctcccacccaaggccctggc
atggtggttggagatgagctgaaaaccccgatccgctcatggcacgacattgagaaggat
aatgccaaacatctgaaaaaggccacaaagtactatgaagctttggccagccgttcagca
gtgaatggtcactgtatcgatatatatgcctgtgctttggatcagactgggctattggag
atgaagtgctgctccaatcttacagggggtcacattgtgatgggtgattccttcaacaca
tccctcttcaagcagacattccagagggttttcagtaaagactacaatggtgaattccga
atggcttttggaggagaattggaggttaagacttcaagggaactgaagatttctggagca
attggtccgtgtgtctctctaaatgcaaaggggccatgcgtgtctgaaaccgaactgggt
ttgggtggcacgagtcagtggaagatctgcggcatcaatcagttcacgacactgggaatg
tattttgaagttgtaaatcagcacaatgcaccagtcccacaaggcagcagaggagccatt
cagtttatcacacagtaccagcattccagcacacagaagagaatccgagttactacagta
gctagaaactgggcagatgcacagtcccagattcagcatattgaggctgcgtttgatcag
gaggcagcagcagtgctgatggcacgcctgggagttttcagagcagagtctgaagagggt
cctgatgttcttagatggctcgacaggcagttaatcagactgtgtcaaaagttcggacag
ttccataaagatgaccccaactccttcaggctgtcggagtccttttccctctatccacag
tttatgttccacttgcggaggtcccccttccttcaggtgttcaataacagccctgatgag
tcttcgtattaccggcatcactttgtgcgacaggacctgactcagtcactgatcatgatc
cagcctatcctttactcctactccttctacgggccacctgagcctgtgcttctagacagc
agcagcatcctaccagacagaatccttctgatggacaccttcttccagcttgtcatctac
catggagagactattgcacagtggcgtaaagcaggctaccaggagatgacagagtatgaa
aacttcaagcagctgcttcaagccccactggatgacgctcaggagatccttcagacacgc
tttccaatgcctcgatacgttgatacagaacacggtggcagccaggctcgattccttctt
tctaaagtgaacccgtcacagactcataacaatctgtacgcatggggacaggaaacggga
gcgcctatcctaacagacgatgtcagcttgcaagtgtttatggatcatttgaagaaactg
gcagtatccagtgcatcgtga
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