Polyodon spathula (Mississippi paddlefish): 121316823
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Entry
121316823 CDS
T07273
Symbol
eef1a1a
Name
(RefSeq) elongation factor 1-alpha 1a
KO
K03231
elongation factor 1-alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121316823 (eef1a1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121316823 (eef1a1a)
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121316823 (eef1a1a)
03012 Translation factors [BR:
pspa03012
]
121316823 (eef1a1a)
04131 Membrane trafficking [BR:
pspa04131
]
121316823 (eef1a1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121316823 (eef1a1a)
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121316823 (eef1a1a)
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121316823 (eef1a1a)
Translation factors [BR:
pspa03012
]
Eukaryotic type
Elongation factors
121316823 (eef1a1a)
Membrane trafficking [BR:
pspa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
121316823 (eef1a1a)
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121316823 (eef1a1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
121316823
NCBI-ProteinID:
XP_041107981
LinkDB
All DBs
Position
6:9679668..9685712
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYNQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSTNMTWFKGWKVTRKDGSAAGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGVVVTFAPVNITTEVKSVEMHHEALS
EANPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAANFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVDMVPGKPMCVESFSDYPP
LGRFAVRDMRQTVAVGVIKAVEKKAPTSGKITKSAQKAQKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaagattcacatcaacattgtagttattggacatgtggattctggcaag
tccaccactacaggtcatctaatctacaaatgcggaggcattgacaagagaactattgag
aaatttgagaaggaagctgctgagatgggcaagggctcctttaaatacgcctgggtgttg
gacaaactgaaagctgaacgtgagcgtggtatcaccattgacatctccctgtggaagttt
gaaaccagcaagtactatgttaccatcattgatgccccggggcacagggatttcatcaag
aacatgatcactggtacctcccaggctgactgtgccgtcctgattgtcgccgcgggcgtt
ggagagtttgaagctggcatctccaagaacgggcagactcgcgagcatgcactgctggcc
tacaccctgggggtcaagcagctgattgtcggcgttaacaagatggactccactgagcca
ccttacaaccagaagagatacgaagaaattgtcaaggaagtcagcacttacatcaagaag
atcggctacaacccagacaccgtggctttcgtgccaatctctggctggaacggtgacaat
atgttggagcccagcactaacatgacctggttcaagggctggaaggtcacccgcaaagat
ggcagtgctgctggtactacccttctggaagcattggatgcaatccagccaccatctcgt
cccactgataaacccctgcgtcttcctcttcaggatgtctacaaaattggaggtatcggt
actgtgccagtaggccgtgttgaaactggtgtcctgaaacctggtgtggtggttaccttc
gctcctgtcaacatcaccactgaagtcaaatctgttgaaatgcaccatgaggctctgtca
gaggcaaatcctggagacaatgttggcttcaatgtcaagaatgtgtcagtgaaagacatc
cgccgtggaaacgttgccggagacagcaagaacgaccctccacaggaggctgctaacttc
actgcacaggtcatcatcctgaaccacccaggtcagatcagtgctggctatgctcctgtg
ctggattgccacactgctcacattgcctgcaaattcgctgagctgaaggagaagattgat
cgtcgttctggcaagaaactggaagacaaccccaagtccctgaaatctggtgatgctgcc
atcgttgacatggtcccaggcaaacctatgtgtgttgagagcttctctgactatcctcct
ctggggcgcttcgctgtgcgtgacatgaggcagactgtggctgttggagtcatcaaggct
gtggagaagaaggctcccacctcggggaagatcacaaagtctgcccagaaggctcaaaag
gcaaaatga
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