Polyodon spathula (Mississippi paddlefish): 121316827
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Entry
121316827 CDS
T07273
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1-like isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121316827
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121316827
Small GTPases and associated proteins
Rab associated proteins
121316827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
PDZ
PDZ_6
FYVE_2
Motif
Other DBs
NCBI-GeneID:
121316827
NCBI-ProteinID:
XP_041107988
LinkDB
All DBs
Position
6:complement(9933435..10061251)
Genome browser
AA seq
1563 aa
AA seq
DB search
MSTSLGPRGPRPPTAPLMEDLPDLSHLTEEERSIIMAVMVRQKQEEDKEEAMLKEENPLE
ARTVLLIGKKQPEQNESRRLHQQFESYKEQVQKIGEDACRCHGEHKDDAPTCGICRKTKF
ADGCGHLCSYCQTRFCARCGGRVSLRSNSEDKVVMWVCNLCRKQQEILTKSGEWFFGRGP
QPSSQDGALSDTATCGDAPREKKVRLQERSRSQTPLSTVAGSQEAQPQIALTDRGEGPDM
LSSRSRSEPPRDRKKPTPVQEQNRKGGHKTERKRVPKIQQGERQGQRQAEERHESRRLEK
GRSQDYQDLDEESRKAEEEKQRNEEEFQTPYRSDPNLARYPLKPQSEEQQMRFHAKVSKA
RHERRHSDVASANTEMVSEVPENRLGRRSQQPGAEDRKSPMENQRSYSIEKTGDVQISVS
KKIANHSPPMQRHSPVPAQQLECKDQDWCKKQCHLDPSSAVIIHKTKREKMETMLRNDSL
SSDQSESLRPPPPKPHKTKIKKRQMSVSSSEEEGGSTPEYTSCEDAEIESESISEKAAVF
GRRQLGCPSPEQCCGDWDCFPLDTAIWHVSDTSPINTHPVTWQPSKEGDHLIGRIILSKR
TTMTKESGALLGLKVVGGKITETGRLGAFITKVKRGSLADVVGHLRAGDEVLQWNSKPLP
GATKKEVYNIILESKSEPQVEIVVSRPIRDIPRIPETSHPPLESSSSSFESQKMERPSIS
VISPMSPGTLKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPSRMDGRPRNPYVKMY
FLPDRSDKSKRRTKTVKKSLEPKWNQTFIYSHVHRKDFLERMLEITVWDQPRVQEEQSEF
LGEILLELETALLDDEPHWYKLQTHDISSLPLPQPSPYMPRRRVQGESPCKKLQRSQRIS
DSDISDYDVADGIGVVSTAAQCRSNDRESKSTTLTVPEQQRTTHHRSRSVSPHRGDNQGR
TRSRIPSVPLQRSLDEIHQSRRSRSPTRYQAASRSPIERRSRDMDSQYFSEESEFLMLPR
AKRGTSVECLHTNSDLQPSLDRVRSASTNCLRPDTSFHSPERERCSHSLDRRRPTSPRIY
IQHASPEDDRQSRTLDRSSSHKHGRKDTASENERAHQQGSLSQSPPTGAPSSGRRGRQLP
QVPVKSSSVEQALAVEERARQMKMKVHAYATATMSSSSQELEREVKTKRELYKEQRRSCD
NVSTRSSDSDISDVSAISHISSTSRLSSTSYMSVQSERPRGRVSAFTSKMYSRQMRNSGG
NMTKSTSVSGEMYNLERNDGSQSDTAIGTVGTGGKKRRSSLSARVVAIVGLPSRKSRSTS
QLIQKEAAHKKLKSTIQRSTETGMAVEMRNCMARQPSRESTDGSMNSYSSEGNLIFSGVR
LGADSQFSDFLDGIGPAQLVGRQTLATPAMGDIQIGMMDKKGQLEVEVIRARGLTAKPGS
KNLPAPYVKVYLLENGICVAKKKTKIARKTLDPLYQQSLLFEESPQGKVLQVIVWGDYGR
MDHKCFMGVAQILLEELDLTSMVISWYKLFPPSSLVDPTLTPLARRASQSSLESSTGPPC
IRS
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttcactggggccccgcggccctcgcccacctaccgcgcctctgatggaagat
cttccagaccttagccatctgacggaggaagagagatctattataatggctgtgatggtt
agacagaagcaagaggaggacaaagaagaagccatgttaaaagaagaaaatccactagaa
gcaagaactgtactccttattggaaagaaacagcctgaacaaaatgaaagcagaagattg
catcaacaatttgaaagctacaaggaacaagttcagaagattggcgaagatgcttgccgt
tgccatggagagcacaaagacgacgccccgacctgtggaatctgtcgtaaaacaaagttt
gctgacggctgcggccatttgtgttcctactgccagacgagattctgtgcccgctgcgga
ggccgtgtctctctccgttccaacagcgaggacaaagtggtaatgtgggtatgcaattta
tgtcgtaagcaacaagaaattctaacaaaatcaggagaatggttttttggaagaggtccg
cagccatccagtcaggatggggctttgagcgatacagcgacttgtggtgatgcacctaga
gaaaagaaggtccggcttcaggaacgatcaagatcgcaaacccccctgagcactgtggca
ggatcccaggaggctcagccacagattgcactcactgacaggggcgaggggccagacatg
ctatcgtccaggtcaagaagtgaacccccaagggacaggaaaaaacccacaccagttcaa
gagcagaataggaaaggaggtcataaaactgaaagaaagcgggttccaaaaattcaacag
ggtgagaggcagggccagaggcaagctgaggagcgccacgagagcagacgcttggagaag
ggcaggtcacaggattaccaggacttggacgaggaaagtagaaaagctgaggaggagaaa
caaagaaatgaggaagagtttcagacgccgtaccggagtgacccgaacttagcaagatat
cccttaaaaccccagtcggaagagcagcagatgcggtttcacgcgaaggtttcgaaagcg
cggcacgaacggaggcacagtgatgtagcttcggccaatacagagatggtgtcggaggtg
cctgaaaacagactgggaaggcggtctcagcagccaggagcagaggatcgcaagtcgcca
atggagaatcaaaggtcgtattcaatagaaaaaactggggatgtgcaaatttcggtttct
aagaaaatagccaatcacagcccacccatgcaaaggcacagcccggttcccgctcaacag
ttagagtgtaaggaccaagactggtgcaagaaacagtgccacctagaccccagttctgct
gtaattatccacaaaactaagagggagaagatggaaaccatgctgaggaatgactcccta
agttctgatcagtcagaatccctgaggcctcccccacccaaacctcacaaaacaaaaata
aagaaaaggcagatgtctgtcagtagctcagaggaagaaggagggtcaacgccagagtac
acgagctgtgaagacgctgagattgagagtgaaagtataagtgaaaaagctgctgtcttt
ggcagaagacagttgggttgcccatctcccgaacaatgctgtggtgactgggactgtttc
ccattggacactgccatctggcacgttagtgatacttccccaataaatacgcatcctgtt
acatggcagccatccaaagaaggtgatcatttaattggacgcattattctaagcaagaga
acaactatgacaaaagagtcaggtgcattacttggattaaaagttgttggggggaagatt
acagaaacgggaagactcggtgccttcatcaccaaagtaaagagaggaagcttagcggac
gtcgttggccacttaagagcaggtgacgaggtgctgcaatggaacagcaagccattacct
ggagcgacaaaaaaagaagtttacaatatcattttggagtctaaatctgaacctcaagtc
gaaatagtagtttcaaggccaattagagatattcctagaatcccagaaacatctcatcct
ccactagaatctagttcaagttcttttgagtctcagaaaatggagaggccttctatttct
gttatatccccaatgagtcccggaaccctcaaagatgcaccccaggttttacccggacag
ctttcagtaaagttgtggtatgacaaagtaggacaccagctaatagtaaacgtgcttcaa
gcaacggacctcccttcgagaatggatggccggccaagaaatccatatgtcaaaatgtat
ttccttccagacaggagtgacaaaagtaaaaggaggaccaaaacagttaagaaaagttta
gagcccaagtggaaccaaacatttatctattcccatgtgcatcggaaggacttcctagaa
agaatgttggaaatcactgtgtgggaccaacctagagtacaagaggaacaaagtgaattt
cttggagagatcctcctggagctggagacagcccttttggacgatgaaccacattggtat
aaacttcagacacatgatatatcttcactacctctgcctcagccatcaccatatatgcca
cggagacgtgtgcagggagaaagcccttgcaaaaagttacaaagatctcagcgaatcagt
gatagtgacatctcagattatgatgttgctgatggtattggagtagtttcaacagctgca
caatgtaggtcaaacgatcgagaaagtaaatccacaacacttactgtgccagaacaacag
agaacgacacatcatcgctcacgatccgtgtcccctcaccgcggtgacaaccagggcagg
acccggtcccgaataccaagtgtgccactacagaggagtttagatgaaattcatcaatca
cgaaggtcacgttctcccactagataccaggctgcctctagaagtccaatagaacgcagg
tctagggatatggacagtcagtatttttcagaggaaagcgagttcctcatgctgcccaga
gcaaaacgagggacaagtgtagagtgcctgcatactaacagtgatctgcagccctctctt
gacagggttaggagtgctagtaccaactgtttgagaccagatactagtttccattcacca
gaacgagaaagatgttcccactcactggataggagacggcctactagccccaggatttat
atccagcatgcctccccggaggatgacaggcagtcaagaacgctggacagatctagtagc
cacaaacatggtagaaaagacactgcttctgaaaatgaaagagcacatcaacaaggcagc
ctgtctcagtcgccccctacaggagctccctcgtcaggacgcagaggaaggcaactcccc
caggtccctgtaaagagcagcagtgtagagcaagccctagcggtagaagagcgggcacgg
cagatgaaaatgaaagtacatgcctacgcaacagccacgatgtccagctcgagtcaagag
ctagagagagaagtgaagaccaagcgggagttatataaagaacagcgcaggagttgtgac
aatgtgtccactagatcctcggacagtgatatcagcgatgtttcagctatttctcatatc
agcagtacctctcgcctcagtagcacaagctacatgtcagtgcaatccgagcgtccccga
ggcagagtcagtgcatttacttctaaaatgtacagcagacagatgcggaattcggggggg
aacatgacgaagagcacaagcgtgagtggggagatgtacaacctggagaggaacgacggc
agccagtcggacacagccatcgggacagtggggacaggagggaagaagcggcgctccagc
ctgagtgcccgagtggtggcgattgtcggcctgccatcgcggaagagtcgaagcacatct
cagctcatccaaaaagaagctgcccacaagaagttgaaaagtaccatacaaagaagcaca
gagacagggatggctgtggaaatgagaaactgcatggctcggcagccgagccgcgagtct
accgatgggagcatgaacagctacagctcggaggggaatttgatattctctggggtgagg
ttaggagctgacagccagttcagtgacttccttgatgggataggaccggcacagctggtt
ggtcgacagactctcgccactcctgccatgggtgatattcagatcgggatgatggacaag
aaagggcagttagaagttgaagttatcagagcgcgtggcctcacagcaaagccaggttcc
aaaaaccttcctgctccatatgttaaggtctacctgctggagaatggaatatgcgtagcc
aaaaagaaaacaaagattgcacgaaaaacacttgaccccttgtatcagcaatcattgctt
tttgaggagagtccacagggtaaagttttacaggtgatagtctggggagactatgggcgc
atggaccacaaatgtttcatgggagttgcacagatcctattggaagagttggacttgacc
agtatggtgattagctggtacaaactgtttccgccttcttccctggtggatcccacatta
acaccactcgcccgccgggcttcccagtcatctcttgaaagttcaactggacctccttgc
ataagatcatag
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integrated database retrieval system
