Polyodon spathula (Mississippi paddlefish): 121316881
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Entry
121316881 CDS
T07273
Name
(RefSeq) atlastin-2-like isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121316881
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121316881
Autophagy
ER-phagy
ER-phagy recepters
121316881
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
LED_rpt
Motif
Other DBs
NCBI-GeneID:
121316881
NCBI-ProteinID:
XP_041108096
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All DBs
Position
6:complement(14315984..14338491)
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AA seq
637 aa
AA seq
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MLLLTKLCCAFFVPVLACNIKHPLRLVGESGTLGPSKLQVADFDKVGALEVLRQRVSYFK
QNKMAEESGMRFRNHSEQNCKNKAFVEGVSGVEDVALNSEDALNSEDVPMKEARPIQIVL
AHEDDHNFELDEEALERILLQEHIRDLNVVVVSVAGAFRKGKSFLLDFMLRYMYNKNSAW
LGGNDDPLTGFTWRGGCERETTGIQVWSEVFVIEKPDGSKVAVLLIDTQGAFDSQSTIKD
CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYKKPFQTLMFLIRDW
SYPYEHPYGLDGGKSFLEKRLQVKQNQHEELQNVRKHVHSCFSKIACFLLPHPGLKVATN
PNFDGRLNDIDGDFKKELKNLIPILLAPENLVEKEIGGSKVTCRDLVEYFKAYIRIYQGE
ELPHPKSMLQATAEANNLAAIAGAKDCYNKSMEQICGGDKPYIAPSDLERKHLDLKEASI
RQFRSVKKMGGEEFCHRYQEQLEAEIEESYANFIKHNDGKNIFYAARTPATLFAVMFVMY
IVSGVTGFIGLNTIATLFNLVMGVALLSLCTWAYVKYSGEFREVGSVIDQVAETLWEQVL
KPLSDHFMEDNIRQTVANSIKAGLTEQVTQHTKLKTN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgttattattaacgaaactttgctgtgctttttttgtacctgtgttggcatgcaacatt
aagcatccgctcagactggtgggtgaaagcgggacgctaggacccagcaaactccaagtt
gcagattttgataaagtgggggcgctcgaggttttacgtcagcgggtttcatattttaaa
cagaataagatggcggaggagagcgggatgaggtttcggaatcattccgaacagaattgc
aaaaacaaggcttttgttgaaggagtcagtggagtggaggatgtcgccttgaattcagag
gatgccttgaattctgaggacgtccccatgaaggaggcccggcccatacagattgtcctg
gcacacgaagatgatcacaactttgagctggatgaggaggccttggagcgcatcctcctg
caggagcacatccgggatctcaacgtggtggttgtttctgtggcaggagctttccgaaag
ggcaaatctttcctgctggatttcatgctgagatacatgtacaataagaattcagcatgg
ttgggtggaaatgatgaccctttgactgggtttacatggcgaggtggatgtgaacgagaa
acaactggcattcaggtctggagtgaagtatttgtgattgaaaagcctgatggaagcaag
gtggctgtgctcttaattgacactcaaggggcctttgacagccagtcgactatcaaagac
tgtgccacagtgtttgctttgagcactatgaccagttcagttcaggtttataatttatcc
cagaacatccaggaagatgaccttcaacatctgcagctgttcacagaatacggacggctt
gcaatggaggaaatatacaagaaaccatttcagacacttatgtttctaattcgagactgg
agttatccttatgagcatccctatggtcttgatggaggaaagagttttttagaaaagagg
ttgcaggtgaaacagaaccagcatgaagagctgcagaatgttaggaagcatgtccattct
tgtttctcaaaaatcgcttgtttcttgctgccacatccaggactcaaggttgccacaaat
cctaactttgatggaagattaaatgacatagatggtgattttaagaaggagttgaagaat
ttgataccaatattattggctcccgagaacttggtagaaaaagaaattggtggctccaaa
gtgacgtgcagagatcttgtagagtactttaaagcttacatcagaatatatcaaggagag
gaactgcctcatcccaagtccatgctacaggcaacagctgaagccaacaatcttgcagct
attgcgggagcaaaagactgttacaacaaaagtatggagcagatatgtggaggagacaag
ccttatattgcaccttcagacttggagcgcaagcacttggatctgaaagaggcatccatc
agacagttccgctctgtgaagaaaatgggaggagaggagttctgccaccgctaccaggag
cagcttgaggctgaaatcgaagagagctatgcaaacttcatcaagcacaatgacggcaaa
aatattttctacgctgctcgcacaccagctacactttttgctgttatgttcgtcatgtac
atcgtctcaggagtgactggtttcattggtttgaacacaatagcgaccctctttaatctt
gttatgggagtagcattgctatcgctgtgtacatgggcatatgttaaatactctggggag
tttagagaagttggatcagtcatcgatcaagtagcagaaaccctatgggaacaggtgttg
aagcctctgagtgatcatttcatggaggacaacattagacagactgtggcaaactccatc
aaagctggtctgactgagcaggttacccagcataccaaattaaagacaaactga
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