Polyodon spathula (Mississippi paddlefish): 121316891
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Entry
121316891 CDS
T07273
Symbol
lmna
Name
(RefSeq) lamin
KO
K12641
lamin A/C
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04210
Apoptosis
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121316891 (lmna)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121316891 (lmna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121316891 (lmna)
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
121316891 (lmna)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
DUF6268
ATG16
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
121316891
NCBI-ProteinID:
XP_041108129
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Position
6:complement(14844501..14874371)
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AA seq
665 aa
AA seq
DB search
METPSQKRPARSGGTPLSPARITRLQEKEDLCELNDRLAVYIDKVRSLESENAGLRLRVS
ESESIVSREVSGIKLAYETELADARKTLDTVAKERARLQLELAKVREEHKELKARNTKKE
ADLAGALARLKDLESLLNSKEATLATALGEKRTLEAELRELKAQLAKLEGGLSDAKKQLQ
DEMLRRVDAENRLQTLKEELDFQRNIYNEELRETKHRHESRLVEIDSGRQLELESKLADA
LTDLRAQHEEQLKLYKEEVEKTYSAKLQNARQSADRNSQLVGSAHEEMQQTRVRMESMSA
QLGQIQKQLAASEARVRELEEALAREKDTTRRQLADKEREMAEMRQRMQQQLDEYQELLD
VKLALDMEISAYRKMLEGEEERLRLSPSPPPRGSVSHSARMVHSSAQSSSGYKKRKLNDT
DSEASSTVGGGAARLRISQKAKASGRVTVDEVDMEGKFVRLSNKSDEDQLLGNWQVKRQV
GTKTSIAYKFPPKFTLKAGKSVTIWASGAGATHNPPSDLVWKSQSSWGSGDSMQTSLISA
NGEEMAMRTVVRVLFEEEDDEDMVRRDVHHHQAAHSTSASGEQCDAEYNLRSRTVLCGSC
GQPSDKSSSAGGSAVSGSSGVTVTRTFRSGGGGGLAEGLVSRAFVLGSNQPRGQAGLTPE
NCSIM
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggagactccctcccagaagcgccctgctcgcagcgggggcacgccgctctccccggcc
cgcatcacccggctgcaggagaaagaggacctgtgcgaactcaatgaccgcctggccgtg
tacatcgacaaggtgcgctcgctggagagcgagaacgcggggctgaggctgcgcgtctcc
gagtcggagagcatcgtcagcagggaggtgtcgggcatcaagctggcctacgagacggag
ctggcagatgcacgcaagaccctcgacacggtcgccaaggagcgggcacgcctgcagctg
gagctggccaaggtccgagaggagcacaaggagctgaaagccaggaacaccaagaaggag
gctgacctggccggggcgctggctcggctcaaggacctggagtccctgttgaactccaag
gaagccactctggccacagcactgggggagaagcgcacgctggaggcggagctccgggaa
ctgaaggctcagctggccaagctggagggaggtctgagcgatgcgaagaagcagctgcag
gatgagatgctgaggagagtggacgcagagaaccgcctgcagaccttgaaagaggagctg
gacttccagagaaacatctacaatgaggagctgcgggagacgaagcaccggcatgagtcc
cggctggttgagattgatagcgggcggcagctggagctggagagcaagctggccgacgca
ctgactgacctgcgagctcaacatgaggagcagctgaaactgtacaaggaggaggtggag
aagacatacagtgccaagctgcagaatgctcgtcagtccgcggacaggaacagtcagctg
gtgggctcggctcacgaggagatgcagcagacccgtgtgaggatggagtccatgtccgct
cagctcggccagatccagaagcagctggctgctagcgaggcgagggtgcgggagctggag
gaggcgctggcgcgggagaaggacacaacgcgcaggcagctggccgataaggagcgggag
atggcagagatgagacagcgcatgcagcagcagcttgatgagtaccaggagctgctggat
gtcaagctggccctggacatggagatcagcgcctatcgcaagatgctggagggagaggag
gagaggctgcgtctctccccgagcccccctcctcgtgggtctgtgtcccacagcgctcgc
atggtgcactccagcgctcagagctcctccggctacaagaagaggaagctgaacgacacg
gacagtgaggcctccagcactgtaggaggcggtgcagcccgtctgcgcatctcccagaag
gccaaagccagcgggcgggtcactgtggatgaggttgacatggagggcaagtttgtgcgc
ctgtccaacaaatcagacgaggaccagctgctgggtaactggcaggtgaagcgccaggtt
ggcaccaagacctccatcgcttacaagttccctccgaaattcaccctgaaggctgggaag
agcgtcacgatttgggcctctggtgccggtgccacccacaaccccccctcggacctggtg
tggaagagtcagagctcgtggggcagtggagacagcatgcagacctctctgatcagcgcc
aatggagaggagatggcgatgcggaccgtggtgcgggttctcttcgaggaggaggacgat
gaagacatggtgcgcagggatgtgcatcaccaccaggctgctcacagcaccagtgcgtca
ggggagcagtgtgatgctgagtataacctgcgcagtcggacagtgctctgcggctcctgt
ggtcagccctcggacaagagcagcagcgcaggtggctcggccgtgtcggggagctccggc
gtgacggtcactcgcaccttccgcagcggcggggggggtggcctggccgaggggctggtc
agcagagccttcgtgctagggagcaaccagccgcgtggacaggctggcctgacccctgag
aactgctccatcatgtaa
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