Polyodon spathula (Mississippi paddlefish): 121316914
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Entry
121316914 CDS
T07273
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121316914
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
121316914
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
121316914
NCBI-ProteinID:
XP_041108198
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All DBs
Position
6:15971937..16004365
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AA seq
1376 aa
AA seq
DB search
MAISMETQLQSIFEEVVKTEIIEEAFAGLFMDTPEDERTKLISCLGAFRQYWSTLPQESH
DQCVQWIVRFIHGQHSPKRISFLYDCLAMAVETGLLPPRMVCEALINSDNLEWERTQLWA
LTFRLIRKIIGGVDYKGVRDLLKALLEKIHSIPNTVSSAVVQQLLAAREVVEYILDRNAC
LLPAYFAITEIRKLYPEGKLSHWLLGSLISDFVDSFRATARINSICGRCSLLPVVNNSGA
ICNSWKLDPATLRFPLKGLLPYDKDLFEPQTGLLRYVLEQPYSRDMVCNMLGLNKQTLNI
AQHKQRCPVLEDQLVDLVVYAMERSETEEQFDDGGTSQLLWQHLSSQLIFFVLFQFASFP
HMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIP
VPDINKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKSLQMT
DYKIALLCNAYSTNSECFTLPMGVLVETIYGNGNMRIPLPGTSCMASGSVSPLPMNLLDS
LTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIESLGIKGFISQLLP
NVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTAL
RLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGT
WCKDILQTIMSFTPHNWASHTLSCFPAPLQAFFRQNNVPQESRFNLKKNVEEEYRKWKSM
AIENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFL
VYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL
LKPNDFRNRVSDFVKENFPEHWMQNDWHTKHMNYHKKYPEKLYFEGLAEQVSPPLQIEPQ
YLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLH
YYEKHLRDRTNLKRKLVHAIISSLKENRTQGWCLSETYLKCAMNAREDNPWIPDDTYYCK
LIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNALLSVV
LKSQPLVPRENITAWMNAIGLVITALPEPYWIVLHDRIVNVVNSPTLTTETEWVGYPFQL
FDFTACHQSYSEMYCSYVLALAHAVWHHSSIGQLSLIPKFLSEVLKPIVKTEFQLLYVYH
LVGPFLQRFQQERTRCMLEIGVAFYEMLQNVDHFSKHLNYMDPICDFLYHVKYMFTGDSV
KEQVEKIICNLRPAVKLRLRFITHISKMEPAAAPQPASVASSGPQPHPGPVHVPPQ
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggccatttcaatggaaactcagctccagagcatatttgaggaggttgtgaaaacagag
atcatagaggaagcctttgctggcttgttcatggacacacctgaagatgaaagaacaaag
ctgatcagttgtcttggagcatttcggcagtactggagcactcttcctcaggaatcccat
gaccagtgtgtgcaatggatagttagattcattcatggccagcatagtccgaaaagaata
tccttcctttacgactgcctggcaatggctgtggaaacgggcctcttgccaccaaggatg
gtgtgtgaggctctgatcaactctgacaatctggagtgggaaagaacacagctgtgggcc
ttgacatttagactaattcggaaaataattggtggtgttgattataagggggttcgtgat
ctcttaaaagccttgttggagaagattcattctattcccaacacggtgagctctgctgtt
gtgcagcagctcctagcagctcgagaagttgttgagtacatcctggatagaaatgcctgt
cttttgccagcctatttcgctattacagagatcagaaaactctatcctgaaggaaagctg
tcacattggttgctgggaagccttatatctgattttgttgacagctttagagcaactgca
agaattaactcaatttgcgggagatgtagtctattacctgtggtaaacaactctggtgca
atctgtaattcatggaaattagatccagcgactcttcgtttcccactgaaagggcttctg
ccttatgataaggatctctttgagccacaaacgggtttgttaagatatgtgctggaacag
ccatattcaagagatatggtctgcaacatgctaggtcttaacaagcagaccttgaacatt
gctcagcacaaacagcgctgcccagtgcttgaggaccagctggttgacctggtggtgtac
gctatggagcgctcggaaacagaggagcagtttgacgacggaggaaccagccaactgctc
tggcaacacctctccagccagctcatcttctttgtgctctttcagttcgccagctttcca
cacatggtgctgtccctccatcaaaagttggctggtcgaggtctcattaaaggcagggac
cacctgatgtgggtgcttctgcagtttatttctggcagcatccagaagaatgcactggca
gacttccttcctgtcatgaaactttttgatcttttatacccagagaaagagtgcattcca
gtgcctgacattaacaagccccagtccacacatgcctttgctatgacttgtatctggatc
catctcaataggaaagcccagaatgacaactccaaacttcagataccaattcctcactct
cttaagcttcaccacgagtttttgcagcaaagtctcagaaataagagccttcagatgaca
gactacaagattgctctgctgtgtaacgcgtactccactaactctgagtgcttcacattg
cctatgggggttctggtagaaaccatctatgggaatggcaacatgaggatccctcttcct
gggacaagctgcatggcatctggatcagtttcccctctgccaatgaacctgctagattca
ctgaccgtgcatgccaaaatgagccttatacacagtatagccacacgagtcatcaaatta
gcccatgctaagtccagcattgccctggctcctgcactggtggaaacatacagccggctg
ttggtttacatggaaattgaatctctggggatcaaaggttttattagccagctacttccc
aatgtgttcaagtcccatgcctggggcatcctgcacacactgcttgagatgttcagttat
cgcatgcaccacatccagccccactacagagtccagctcctcagccatcttcattctctt
gctgctgttccacaaacaaaccaaaaccagctgcatctttgtgtggagagcacagctctg
aggttgatcactgcccttggaagctcagaggtccagccacagttcacacgtttcctcagt
gatcctaaaactgtgctttcagcagagtctgaggaactcaaccgagctctgattctcaca
ctggctagagcaacacatgtaacagatttctttacaggctctgattcaatacaaggaact
tggtgtaaggatatattgcagactatcatgagctttactccccacaactgggcttcacac
actttgagttgcttcccagctccactgcaggctttcttcagacagaacaacgtccctcag
gagagccgctttaacctgaagaagaatgtggaggaggaatacaggaagtggaaatcgatg
gccattgagaatgacattatcactcatttctccatgcaaggctcccctcctctctttctc
tgcctgctctggaagatgctgctcgagacagatcacattaaccagattggttacagggta
ctggagaggattggggctcgggctttggtggctcacgtccggacattcgctgacttcctt
gtgtatgagttctccacttcggctggaggccagcagctgaataaatgtattgagatactc
aatgacatggtctggaaatacaatatcgttacattagacagactcattttgtgtttggca
atgagaagccatgaagggaatgaagcccaagtttgctacttcatcatccagctgctatta
ctgaagcccaatgacttcaggaaccgagtgagtgactttgtgaaggaaaacttcccagaa
cactggatgcagaatgactggcatactaaacacatgaactatcacaagaaatatcctgag
aaactatattttgaaggcctagcagaacaggtgagcccaccgttgcagatcgagcctcag
taccttcccatttactttggaaacgtctgtcttcgcttcctgcctgtgttcgacatcgtc
atccaccggttcctggagctccttccggtgtccaagtccttggagacactcctggatcat
ttgggtggcttatataaatttcacgaccgtcctgtgacatacctctataacactctgcac
tactacgagaaacatcttcgtgatcggaccaacttgaagcgcaagcttgtgcatgccatc
atcagctcactgaaggaaaaccgtacacaaggctggtgcctcagtgagacgtacctaaaa
tgtgcaatgaatgcacgcgaggacaacccatggattcctgatgacacctactactgcaag
ctcattggccgattagtggatacaatggctggaaaatctcccggccctttccctaactgc
gactggaggtttaatgagtttcctaaccctgctgcgcatgctctccatgtgacctgtgtg
gagctcatggctttagctgtgccaggaaaagatgttggaaatgcacttctcagtgttgtg
cttaagagccaacctttggtacccagggagaacattactgcatggatgaatgcaatcgga
cttgtaatcactgccttacctgagccttattggattgttctccatgatcgcatcgtgaac
gttgtcaacagccctactctgacaacagaaactgagtgggtcgggtacccatttcagctg
tttgatttcacggcctgccaccagtcttattctgagatgtactgtagctatgttctagct
ttggctcatgcagtatggcatcattcaagcataggacagctttccctcattccaaagttt
ttgtcggaggtgctgaaaccaatcgtgaagacagagttccagctgctgtatgtgtaccac
cttgtggggccatttctacagaggtttcagcaggagaggacaagatgtatgctagagata
ggggtggccttttatgagatgctccaaaatgttgaccacttcagcaaacacttgaactac
atggaccccatctgtgattttctttatcatgtgaagtacatgtttacaggagacagcgtc
aaagagcaagtggaaaaaataatttgcaacctgagaccggcagtgaagcttcgtctgcgg
tttataacccacattagcaaaatggagccagctgctgcccctcagccagcaagtgttgcg
tcctcaggcccccaaccccatccagggcctgttcatgtccccccacagtag
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