Polyodon spathula (Mississippi paddlefish): 121316923
Help
Entry
121316923 CDS
T07273
Name
(RefSeq) receptor-type tyrosine-protein phosphatase kappa isoform X1
KO
K06776
receptor-type tyrosine-protein phosphatase kappa [EC:
3.1.3.48
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121316923
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121316923
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121316923
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121316923
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
Type II RPTP family
121316923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
DSPc
PTP-SAK
I-set
Tc-R-P
ig
Pur_ac_phosph_N
Ig_3
Ig_2
Y_phosphatase3
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
121316923
NCBI-ProteinID:
XP_041108230
LinkDB
All DBs
Position
6:16551756..16716539
Genome browser
AA seq
1462 aa
AA seq
DB search
MDTTVPFLLFLVSCNLRVAAQFTAGGCNFDDGPAQCDYQQDLYDDFDWTHVSVQEAPYLS
TELPQGSYMMVDSSQHDAGEKARIQLPVMKENDTHCIDFNYLLYSKDGSSPGTLNILVKV
NKGPLSNPIWNVTSFTGRDWLRAELAVSTFWPNEYQVIFEAQVSEGKMGYIAIDDIQVLS
YPCDKSPHFLRLGDVEVNAGQNATFQCIATGREAVNNKLWLQKRNGEDIPVAQTKNINHR
RFAASFRLREVTNLDQDLYRCVTQSDRGSGVSNFAELIVREPPRPIAPPQLLGVGPTYLL
IQLNANSIFGDGPIILKEVEYRMTSGSWIETHAVNAANYKLWHLDPDTEYEIRVLLTRPG
EGGTGQSGPPLITRTKCAEPMRTPKSLKIAETQARFIAVDWESLGYNITRCHTFNVTICY
QYFHSNNESNCLDMDPKAPRHVVGNLPPYTNVSLKMILTNPEGRKESDEVVIQTDEDVPG
PVPSESMKATPFEDKIFLHWKEPLEPNGVITQYEISYSSIRSFDPAVDVAGHPLTVALSW
NSTHHVFSQLHPGTTYQFIIRASTVKGFGPPTVVNVTTNISAPSIPDYDMTETCLNETAT
TITVLLKPATAKGAPISAYQIVVEELNPHRNKREASSLDCYQVPITFQSAASGGSPYYFA
AELPPGSLPDPAPFTVGDNKTYHGFWNPPLAPRKNYNIYFQAVSSVEKETKTQCVRVATK
AAATEEPEVIPDPAKQTEVVKIAGISAGVLVFILLLLVVILVIKKRRSYYSYSYYLKLAK
KRKDVIGNTRQEMTHMVNAMDRSYADQSTLHAEDPLAVTFMDSHKFNNRLPNDPLVPTAV
LVPITDENHTAAAAAESNRLLDVPRYHCEGTESPYQTRQLHPAIRVADLLQHINLMKTSD
SYGFKEEYESFFEGQSASWDVAKKEQNRTKNRYGNIIAYDHSRVILQPMEDDPSSDYINA
NYIDIWLYRDGYQRPSHYIATQGPVHETVYDFWRMIWQEQSACVVMATNLVEVGRVKCYK
YWPDDAEVYGDFKVTFVEVEPLAEYVVRTFTLERRGSNEMREVKQFHFTGWPDHGVPYHA
TGLLSFIRRVKMSNPPSAGPIVVHCSAGAGRTGCYIVIDIMLDMAEREGVVDIYNCVKAL
RSRRINMVQTEEQYIFIHDAILEACLCGETTIPACEFKATYYDMIRIDSQSNSSHLKDEF
QTLNSVTPQPQPEDCSIALLPRNHEKNRFMDMLPPDRCLPFLITLDGESSNYINAALMDS
YRQPAAFIVTQHPLPNTVKDFWRLVYDYGCTSLVMLNEIDLAQGCPQYWPEEGILRYGPI
QVECMSCSMDCDVISRLFRICSLTRPQEGYLMVRQFQYLGWASHREVPASKRSFLKLILQ
VEKWQEECEEGEGRTIIHCLNGGGRSGMFCAISTVCEMIKRQNVVDIFHAVKSLRNSKSN
MVESPEQYRFCYDLALEYLESS
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggatacgaccgttccatttcttttatttcttgtttcatgtaatctgagagttgcagct
cagtttaccgcaggaggctgtaactttgatgatggccctgctcaatgtgattaccagcaa
gatctgtatgatgacttcgactggactcatgtcagtgtgcaggaagctccatatttatca
acagaactgccgcaagggtcgtacatgatggttgactcctcgcagcatgacgcgggtgaa
aaagcacgtattcagcttccagtgatgaaagaaaatgacacccactgtattgacttcaac
tacttattatacagcaaagatggctcaagcccaggaacattaaacatcttggtaaaggtt
aacaaaggacctctttctaatcctatctggaatgtgactagcttcactggcagagactgg
cttcgagcagagctggctgttagtaccttctggcctaatgaatatcaggttatatttgaa
gcgcaagtctcagaggggaagatgggttacattgcaattgatgatatccaggttttgagc
tatccatgtgataagtctcctcactttctgcgacttggtgatgtggaagtcaatgctgga
cagaatgctacttttcagtgtattgctactgggagggaggcagtgaataataagctatgg
ctgcagaaacggaatggggaagacattccagtggcacagacaaagaacataaaccacaga
aggttcgcagcatcatttagattacgggaagttacaaatctggaccaagacctgtatcgc
tgcgtgactcaatctgacagaggatcgggagtgtctaattttgctgagctgattgttcga
gaacctcctcgacccatagccccgcctcagctgcttggtgttggccctacataccttctt
atccagttgaatgccaactctatttttggagatgggcctattatattgaaagaagtggag
taccgaatgacatcagggtcgtggattgaaacccatgctgtgaatgctgccaactacaaa
ctgtggcacttagacccggacacagagtatgagatcagagttcttctgaccagacctggg
gaaggaggtactggtcagtcaggccctcctctcatcacgaggacaaaatgcgcagaacca
atgaggacacccaaaagtttgaagattgcagagacacaggccagattcattgccgtggac
tgggagtctttgggttacaacataacacgctgccacacattcaatgtcaccatttgctac
cagtacttccatagtaataatgagagcaattgtctggatatggaccccaaggcaccccgg
catgttgttggaaatctaccaccatatacgaatgtgagcctcaagatgatccttaccaac
ccagaaggaagaaaagagagtgatgaggtggttatccagacagatgaagatgtgcctggc
cctgttcccagtgagtctatgaaagctacgccatttgaagataaaatcttcctccactgg
aaggagcctttggagcccaacggagtcatcactcagtatgagatcagttatagcagcatt
aggtcatttgatcctgcagtcgatgtggcaggacatccactgacagttgcattgtcatgg
aacagcacacaccatgtattctcacagctgcatccaggtaccacctaccagttcattatc
agggccagcactgtgaaggggtttgggccgccaaccgttgtgaatgtcaccaccaacata
tcagctccttcaataccagattatgatatgactgaaacttgtcttaatgagaccgctacc
actattactgtattgctgaaacctgccacggccaaaggtgctcccatcagtgcctaccag
attgttgttgaagaactgaaccctcacagaaataagagagaggcaagttcactggattgc
taccaagtaccgatcaccttccagagtgcagccagtgggggttccccatattattttgct
gctgagcttccacctggaagcctgcctgacccagctccattcacagtgggagacaacaaa
acataccatggtttttggaatccacctttggccccgaggaaaaactataatatctatttt
caggctgtgagcagtgtggaaaaggaaacaaaaactcagtgtgtgagggttgccacaaaa
gcagcagctacagaggaaccagaggtaataccagatccagccaagcaaacagaagtggtg
aaaattgctggcataagtgctggagttctcgttttcatcctgctcctcctggttgtcata
ttagttatcaagaagaggaggagctactattcttattcatattacctcaaacttgccaag
aagcggaaggatgtcattggaaacacccgtcaggagatgactcacatggtcaatgcaatg
gacaggagctatgctgatcagagcactctgcatgcagaggatcccctggctgtcacattc
atggactctcacaaattcaacaataggttgcccaatgatccacttgtgccgactgctgtg
ttagtgccaataactgatgagaaccacaccgcagcagcagcagcagagtcgaacagactg
ctggatgtgccacgctatcactgcgaagggaccgagtccccctatcagaccaggcagctg
catcctgcgatcagggtggcagatttgctgcagcacattaatttgatgaagacttctgac
agctatggattcaaagaggaatacgagagtttctttgaaggccagtctgcttcatgggat
gtagcaaagaaggaacaaaaccgaacaaagaatcgctatggaaatataattgcatatgac
cattccagagttattttacaacctatggaagatgacccatcctctgattacattaatgcc
aattacatagatatatggctgtacagggatggatatcaaaggccaagccattacatcgct
acacaaggtccagttcatgaaacagtgtatgatttttggaggatgatctggcaggaacaa
tctgcatgtgttgtgatggctacaaatctggttgaagttggacgtgtaaaatgctacaag
tactggccagatgatgctgaagtatatggagacttcaaagtgacgtttgtggaagtggag
ccacttgcagaatatgttgtccgaacattcacattggaaaggagaggctccaatgaaatg
cgtgaagtgaaacagtttcatttcactggctggcctgaccatggagtaccttaccatgca
actggcctgctgtcattcataagacgtgtcaaaatgtcaaacccacccagtgcaggtccc
attgttgttcactgcagtgctggagctggaagaacaggatgctacattgtaatagacatc
atgctggacatggctgagagagagggagttgtggatatttacaactgtgtgaaagctttg
cgttctcgacggattaatatggttcagacggaggaacagtacatttttattcatgatgcc
attctggaagcgtgcttgtgtggagagacaacaatacctgcttgtgaattcaaggctacc
tactatgatatgattagaatagactcacaaagcaactcttctcacctaaaagatgaattc
cagacgctgaattctgtaactccacaaccccagccagaagactgcagcattgctctgctt
cccaggaatcatgagaagaaccgtttcatggatatgctgcctccagacagatgtctacct
tttcttatcactttagatggagaaagtagtaactacattaatgccgcccttatggatagc
tatagacaacctgctgcctttattgttacacaacatcctttgcccaacactgtaaaggac
ttctggaggctggtttatgactatggctgtacttcattggtgatgctaaatgagattgac
cttgcacagggatgtccgcagtattggccagaagaaggaatcctcagatatgggcctatc
caagtcgaatgcatgtcttgttccatggactgtgacgtgataagcagacttttcagaata
tgcagtcttactagaccacaggaaggttacctgatggtacgccagtttcagtacctcgga
tgggcatctcaccgtgaagtaccagcatccaagagatcattcctgaagttaattcttcag
gttgagaaatggcaagaggaatgtgaagaaggagaaggtcgaacaattattcactgccta
aatggaggaggacgcagtggaatgttctgtgccatcagcactgtgtgtgaaatgattaag
cggcagaatgtggttgatattttccatgcagtgaaaagtcttcgtaacagcaaatcaaac
atggtggaaagcccagaacaataccgcttttgctacgacctggcccttgagtatttagag
tcatcttaa
DBGET
integrated database retrieval system
