Polyodon spathula (Mississippi paddlefish): 121316928
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Entry
121316928 CDS
T07273
Name
(RefSeq) syntaxin-7-like
KO
K08488
syntaxin 7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
pspa04140
Autophagy - animal
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121316928
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121316928
04140 Autophagy - animal
121316928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121316928
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121316928
Membrane trafficking [BR:
pspa04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
121316928
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121316928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
CCDC-167
DUF2935
SKA1
ABC_tran_CTD
DUF6584
Syntaxin
Prominin
DUF5345
Motif
Other DBs
NCBI-GeneID:
121316928
NCBI-ProteinID:
XP_041108245
LinkDB
All DBs
Position
6:17026059..17050267
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AA seq
257 aa
AA seq
DB search
MSYQSGTDADTNRLAQTIGSNIQKITQYTAEIQRIVNQLGTPQDTTELRQQLQQKQQYVN
QLAKETDRYMKEFGSFPQTAEQRQRKIQKDRLVGDFSNALAAFQKIQRQAAQKEKEFVAR
VRASSRVSGGLPDDGGLVSFESENRPQAQVQDDAIREEDLMLIKERETSIRQLESDIMDI
NEIFKDLGMMIHEQGDTIDSIEANVETAEIHVQSANHQLSRAAEYQSKSRKKICILIVVL
TVLAVVIGLIIWVAVKN
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccagtcagggacagatgctgatacaaaccgccttgcacagaccataggttca
aacattcagaagattacacagtacactgctgaaatccaaagaattgtaaaccagcttgga
acaccacaggacaccaccgaactgcggcagcagctccaacagaaacaacagtatgttaat
cagctagccaaagaaacagacaggtatatgaaagagtttggatcttttccacagacagca
gaacagcgccaaagaaagatccagaaagatcgtctagttggtgacttttctaatgcattg
gctgctttccaaaagattcaaagacaggctgctcagaaagaaaaggaatttgtagccaga
gtgcgtgccagctcaagagtgtctggtggtttgccagatgatggaggcctggtgtccttt
gaaagtgaaaaccggccccaagcacaggtacaagatgatgctattagagaagaggacctc
atgcttatcaaagaaagagaaacttccataaggcagctggagtctgatattatggatatc
aatgaaatcttcaaagatttgggaatgatgattcatgagcaaggagacacaattgacagc
atagaggccaatgtagaaactgctgaaatacatgtgcagtcagccaaccatcagctgtcc
agggctgcagaatatcagagcaaatcccgcaagaagatctgcattctaattgtggttctc
acagtactagctgttgtaattggactaatcatctgggttgctgtgaaaaattaa
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