Polyodon spathula (Mississippi paddlefish): 121316930
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Entry
121316930 CDS
T07273
Symbol
ppwd1
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121316930 (ppwd1)
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121316930 (ppwd1)
Enzymes [BR:
pspa01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
121316930 (ppwd1)
Spliceosome [BR:
pspa03041
]
Complex C
Other components
PPlases
121316930 (ppwd1)
Chaperones and folding catalysts [BR:
pspa03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
121316930 (ppwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
WD40
WD40_WDHD1_1st
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
121316930
NCBI-ProteinID:
XP_041108253
LinkDB
All DBs
Position
1:29548501..29557198
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AA seq
624 aa
AA seq
DB search
MASCTLEQKRKLEVQDENGGETAEDEWVGPMPAEATQSKKRKVLEFERVYLNNLPSAAMY
ERSYMHRDVITHIACTKTDFIITASHDGHVKFWKKKEDAGIEFVKHFRSHLGVIECIGVS
AEGALFCSVGDDQAMKVFDVVNFDMINMLKLGFHPGQCEWIYNPGDAISTVACSEKSTGK
IFVYDGRGDNQIIHVFEKMHSSPLSQIRLNPAYRVVVSADKAGMLEYWTGLPNEFKFPRN
VDWEYKTDTDLYEFSKCKTYPTSLAFSYDGKKMATIAADRKVRIFRFLSGKLMRVFDECL
TMFTELQQMRQQLPDMEFGRRMAVERELEKVDGIRLTNIIFDETGHFVLYGTMLGIKVIN
VETNRCVRILGKQENIRVVQLGLFQGIAKVHHAAPTIEMKASDNPALQRAEPDPTIFCTA
FKKNRFYMFTKREPEDTKSAESDRDIFNEKPSKEEVMAATQAEGPKRVSDSAIIHTTMGD
VHIKLFPVECPKTVENFCVHSRNGYYNGHIFHRVIKGFMIQTGDPTGTGMGGESIWGGEF
EDEFHATLRHDRPYTLSMANGGPGTNGSQFFITVVPTPWLDNKHTVFGRITKGMEVVQRI
SNVKINPKTDKPYEDISIINITVK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttgtacattggaacaaaaaagaaaattagaggtccaggatgaaaatggagga
gaaacagcggaagatgaatgggttggaccgatgcctgccgaggctacgcagtcaaagaaa
agaaaagtgcttgaatttgagcgcgtgtacctgaacaacctccccagtgctgcaatgtac
gaacggagttacatgcatagagacgtcatcacacacatagcatgcacgaagacagatttt
attataactgcaagccatgatgggcacgtgaagttctggaagaagaaagaagatgcagga
atagagtttgttaaacattttcgaagccatttaggtgtgattgagtgcattggcgtaagt
gcagagggggcattgttctgttcagttggagatgaccaggcaatgaaagtttttgatgtt
gttaactttgacatgatcaacatgcttaagcttggatttcatcctggccagtgcgagtgg
atctacaatcctggcgatgctatatctactgtagcctgttcggagaaaagcacaggaaag
atttttgtctacgatggaagaggagacaaccagataattcatgtctttgaaaaaatgcac
tcttcccctctgtctcagatacgtctgaatccagcctatagagtcgtagtatctgctgac
aaggctggcatgttagagtactggactggcctaccaaatgagtttaaatttcctagaaat
gtggactgggagtacaagactgacacagatttgtatgaattttccaaatgtaaaacctat
ccaaccagcctggccttctcttacgacgggaagaaaatggccacaatcgcagcggaccgg
aaagttcgaattttccgcttcttgtctgggaagctcatgagagtgtttgatgagtgcttg
acgatgttcacagagctgcagcagatgaggcagcagctgcctgacatggagtttggtcgc
cgcatggcagtggaacgggaactggagaaggtggacggcatcagactgaccaacatcatc
tttgatgaaactggacactttgttctttacgggacaatgctgggcattaaagttatcaat
gtggaaacaaacaggtgtgtgcggatcctgggcaaacaggagaacatccgggtggtccag
ctgggtttgttccagggcattgctaaagtacaccacgctgctcccactatagagatgaag
gcatcggacaatcctgccctgcagagagccgagccagacccaaccatcttctgcacagcg
tttaaaaagaacaggttttatatgttcaccaaaagggagccagaagacacaaagagtgca
gagtctgacagagacatcttcaatgagaaaccatccaaagaggaagtcatggcagccacg
caagcagagggtcctaaacgtgtttcggacagtgccattatacacaccactatgggagat
gttcacatcaagctcttccccgtagagtgtccgaagacagtggagaacttctgtgttcac
agcagaaacgggtactacaatggacatatatttcatcgagtaataaagggctttatgata
caaactggagatcccacaggaactggaatgggtggagaaagcatctggggaggagagttt
gaagacgaattccacgcaacgttaagacatgaccgaccgtacactctgagcatggccaat
ggtggacctggtaccaatggctcacagttctttattaccgttgtgccaacaccttggctt
gacaacaaacacacagtttttggaagaattaccaaaggaatggaagtcgttcagagaatc
tcaaacgtaaaaatcaatcccaagacggacaagccctatgaagacatcagcatcataaac
atcactgtcaagtaa
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