Polyodon spathula (Mississippi paddlefish): 121316947
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Entry
121316947 CDS
T07273
Name
(RefSeq) SAM and SH3 domain-containing protein 1-like isoform X1
KO
K23705
SAM and SH3 domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121316947
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
121316947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SASH1_Homeodomain
SPIDER
SAM_1
SAM_2
SH3_2
SHOCT-like_DUF2089-C
SH3_1
Motif
Other DBs
NCBI-GeneID:
121316947
NCBI-ProteinID:
XP_041108278
LinkDB
All DBs
Position
6:complement(17542468..17873023)
Genome browser
AA seq
1332 aa
AA seq
DB search
MMSTNIVYEWLKTLQLCQYAESFVDNGYDDLEVCKQIGDPDLDAIGVFLPHHRKKIHDAV
KRLKEEEKETATGLYFTLEPEIPPILGIYTCHTMEQYDVKVRGAKSYTEHKVAKVERSPG
CQGTNRNHQHGTSKELVTYPKLKLKIMIRDKLTRDGVNLSKPPYSNKDGSLGNIDDLAQQ
YSEYYNTCFSDVCERMEELRRRRVSQEIDVEKPDSSTMSLQLRSQIEESLGFSSTVSTPE
AERKVSLHKSSSEDGSVGKGDCKKKNKSFWQNFRKSQKGVMRQTSKGEDIGYVASEITMS
DEERIQLMMMVKEKMITVEEALARLKEYETQSRQPSSTDNAEWVDGSNANITESSNCNSR
EQSDDETEESVKFRRLHKLVNSTRRVRKKLIKVEEMKKPSTEDLCFESSPMCEDSSALYT
GVQKKPHLPQEDSLSPLQQLSFEEDSDSLTTSPSSSSLDTWSGHKLVKTFGKSSSSHGLI
QLSKKSGSGSSFSSGVEGCGEEDQVQKVSRSMTDGEMRKALSPINHARTCSFGGFDLTNR
SLQIANNGCEQTEAIYREVVKSPTTSRLSLGKKVKSVKETMRKRMSKKYSSPASEQESNL
DGMPSSPQSQDLPVTDSLEKPKLKAGGSVESLRSSLSGQSSMSGQTVSTTDSSASNRESV
KSEDGDDEEPPYRGPFCGRARVHTDFTPSPYDSDSLKLKKGDVIDIISKPPMGTWMGLLN
NKVGTFKFIYVDVLSEEEEKPKRPVRRRRKGRPPKPKSVEDLLERINLKEHMPTFLFNGY
EDLDTFKLLEEEDLGELNISDPEHRAVLMTAVELLQEYDSNSDVEKSSHSGSQETLLSDG
QGLTGESPRDSGCYESSENLENGKIRKNLLSTKSSAEPVSNSHQLVNYPTLPPTNSTKAL
QHTKKECKFSKRHFPKPSVKSFNILSLKKNRRSLLVPVSRSCENLGGQQLAQDLWKRSRS
LGDLHSEQSSESKKIHSLEFKVARPISICADTLCDQGSRRQSPSTTGGGETEPNSYLNTI
ELDTNCDPQSHVALQNSVIMSDSELTKTDPEESRSPVPQAQAPEKNEVRCDTKTHSKKPL
QPPPVPDKKCRERLANGLHHPTLILPTADALSLPLKKASSSSPIDCRPPFASPEEEPGTP
PATRPPWLSDLPETACLQMHGVRLGPALGRKIPHTRVADLEMLLEERLESEGIDLTEEPY
SDKHGRCGIPESLVQRYAEDLEQPVNDVASNMDRVRVKQLRKQHRMAIPSGGLTEICRKP
VTPGHLNSVSDWLVSIGLPMYLNLLTAAGYDTLNQIASLTETHFQEAGVKEERHVNRLLA
GARLVQSDDAQL
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtaccaatatcgtatacgagtggctgaagactctccagctctgtcaatatgca
gaatcctttgtggataatggctatgatgatttggaagtgtgtaagcagattggcgaccct
gacctggatgctattggggtcttcttgcctcatcacaggaaaaaaattcacgatgcagtg
aagaggttaaaagaagaggagaaagaaacggctacaggactgtactttaccctggagccc
gagataccccccattctgggaatctacacctgccacacgatggagcaatacgatgtcaaa
gtgaggggggccaaatcttatactgaacacaaagtcgcgaaggtcgagaggagccctgga
tgtcagggcacaaacaggaaccaccagcatggcacttccaaagagctggtcacttacccc
aaactgaagctaaagatcatgatcagagataaactgacccgcgatggagtaaatctcagt
aaaccgccctattcgaataaggatggttcattgggaaacattgatgacctggcccagcag
tactctgagtattacaacacctgtttcagcgacgtatgtgagaggatggaggagctacgc
agacggagagtgtctcaggaaattgacgtggagaaacctgattccagcaccatgtcactc
cagctccgatcccagattgaagagtctcttggttttagcagcacagtgtccacgccagaa
gctgagaggaaggtgtcccttcacaagtcaagctctgaagatggatcagtaggaaagggg
gactgcaagaagaaaaacaagtccttctggcagaattttcgcaagtcacagaagggagtc
atgcggcagacttcaaaaggagaggacattgggtatgtggccagtgagatcacaatgagt
gatgaagagcggattcaactcatgatgatggtgaaagagaagatgataactgtagaggag
gccctggccaggttgaaggagtatgagacccagagcagacagcccagcagtactgacaat
gcagaatgggtcgatggatccaatgcaaatataaccgagtcttcaaactgcaattcccga
gagcagtctgatgatgaaactgaagagtcagtgaagtttaggcggttgcacaagctggtg
aattccacccgcagagtgagaaagaaactgattaaagtggaagaaatgaaaaagcccagc
acagaagatctgtgttttgagagctcccccatgtgtgaggacagctctgcgctctacaca
ggggtgcagaagaagccccatctcccccaagaggactccttgtctcccctgcagcagctc
tcctttgaggaggactcggacagcctgactacctcgccctcctccagcagcctggacacc
tggtcgggccacaagctggtcaagacctttggcaagtccagtagcagtcacggccttatc
cagctgtctaagaaatctggaagcggctcttccttctcctctggagtagagggctgtggc
gaggaggaccaggttcagaaggtgtcacgttccatgacagacggcgagatgaggaaggcc
ttgagcccaataaaccatgcgagaacctgtagctttggaggatttgacttgacaaataga
tcacttcagatcgcaaacaatggctgtgaacaaacagaagcgatttacagggaagtagtg
aagtctcccaccacatccaggttatcccttggtaagaaggtgaagtctgtgaaagagacg
atgaggaaacgaatgtccaaaaagtacagcagccccgcatctgaacaggagtcaaatctt
gatgggatgcccagttcccctcagtcccaagatttgccagtcacagattcgctggagaag
cccaagctgaaggccggagggtctgtggagagtctgaggagctctctaagtgggcagagt
tcaatgagcggtcagacagtgagcacaacggactcttccgccagcaacagggagagtgtg
aagtctgaagacggtgatgacgaggagcccccctacaggggtccgttctgcggccgagcc
cgggtccacacagacttcactcccagcccctatgactccgactccctcaaactcaagaaa
ggagatgtcattgacataatcagcaagcctcccatgggcacctggatgggtctgctgaac
aacaaggtggggacgttcaagttcatctacgtggacgtgctgagcgaggaggaggagaaa
cccaagaggccagtgcggaggaggaggaagggccgcccccctaaacccaagtcagtggag
gatctcctggagcgcatcaacctcaaggagcacatgccaactttcctgttcaacggctat
gaggatctagacactttcaagctgctggaagaggaggatctgggtgagctgaacatcagc
gaccctgaacacagagccgttctgatgactgctgtggagctgctgcaggaatatgacagt
aatagtgatgtggagaaaagctctcactcaggctcccaggagacactcctgtcagatggg
caaggcctgactggggagtctccccgggactctggctgctacgagagcagtgaaaacctg
gagaacggtaagatcagaaaaaatctgttgtccaccaaatcctctgcagaacctgtatca
aacagccaccagttggtcaactaccccactcttccaccgacaaattccaccaaggccttg
cagcataccaagaaggagtgcaagttcagcaagcggcatttccccaagccttccgtcaag
tccttcaacatcctcagcttgaagaagaaccgccgcagtctgctggtgcctgtgagccgc
agctgtgagaatctgggcggacagcagttggctcaggacctgtggaaacgttctcgctcg
ctaggggacctccatagtgagcagagctctgagagcaagaaaatccatagtttggagttc
aaagtagctaggcccatcagtatttgtgcagacactttgtgcgaccagggcagcagaagg
caatcccccagcactaccggagggggagaaactgaaccgaactcatatttgaatacaata
gaactagatacaaactgtgaccctcagtcgcacgtagctttacagaactccgtaatcatg
agtgattcagagctcaccaagactgacccagaagaatctagaagcccagtcccccaggca
caagccccagagaagaacgaagtgaggtgcgacacaaagacacattccaaaaagccattg
cagcctcctccagttcctgacaagaaatgcagggaacgcttagctaatggccttcatcat
ccaaccctgatcctccctactgcagatgcactctctttacccttaaaaaaggccagttct
tctagtccaattgactgtagaccaccctttgcctctcccgaggaggagccaggcaccccc
ccagctacacggccaccttggctctctgatctcccagagacagcttgtctgcagatgcat
ggtgtcagattgggcccagccttgggaaggaagatcccccacacaagggtggctgaccta
gaaatgctgcttgaggaaaggttagagtctgaggggatcgatctcactgaggagccttat
tcagacaagcatggtcgctgtggcattccagaatccctggtgcagaggtatgctgaagac
ctggagcagcctgttaacgatgtggcttcaaacatggaccgagttcgggtgaagcagctt
cggaaacagcaccgcatggcgatcccctctggaggtctaactgaaatctgccggaagcct
gtgaccccgggacatctcaactcagtctctgattggctggtttctatcggactgcccatg
tacttaaacttgctcacagcagcaggatatgacacgctgaaccaaatagcctccctgaca
gagactcatttccaggaagctggcgtcaaggaggaacgacacgtaaacaggctgttagca
ggggctaggctggtgcaatctgacgatgctcagttataa
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