Polyodon spathula (Mississippi paddlefish): 121316948
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Entry
121316948 CDS
T07273
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121316948
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121316948
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
121316948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Synaptobrevin
Beta-prop_Vps41
WD40_like
Motif
Other DBs
NCBI-GeneID:
121316948
NCBI-ProteinID:
XP_041108283
LinkDB
All DBs
Position
6:complement(17890775..18029586)
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AA seq
1202 aa
AA seq
DB search
MKKFNIRKVLDGLSAVSSSSSSQPGNRDNDIHETLQSEHFQLCKTVRHGFPYQPSAMAFD
PVQKILAVGTQNGSLRLFGRPGVECYCQHDNGAAVIQLQFLINEGALVSALADDSIHLWN
LRQKRPAILHSLKFNRERITFCHLPFQSKWFYVGTERGNIHIVNVESFTLSGYVIMWNKA
IELSSKAHPGPVVHISDNPIDEGKLLIGFESGTVVLWDLKSKKADYRYTYDEAIHSVAWH
HEGKQFICSHSDGSLTIWNVRSPAKSAQIITPHGKQPKDGKKPEPCKPILKVEYKTTRAG
DPFMVLSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDVQEPYAVV
VLLEKDLVVIDLAQNGYPIFENPYPLSIHESPVTCCEYFADCPVDLIPALYSVGSRQKRQ
GYSKKEWPISGGNWGLGSQSYPEIIITGHADGSVKFWDASAMMLQVLYKLKTAKVFDKSR
NKDDKPNTDIVDEDPFAIQILSWCPESRMLCVAGVSAHVIIYKFSKQEGTTEVVQLLEVR
LQYELNDVESPEGDQVPSLPTPGATSSSQPPAPQSQPSTSSSSSDGIRDNVPCLKVRSTP
LKQSAGYQVELVIQLVWVSGEPPQQITSLGVNSSCGLVVFGNSNGLAIVDYLQKTVLLNR
GIIELYGSNDPYQRQPRSPRKTRQPSGAGLCDINEGSTTSEDRCKSPTSGFTSPCNSDDD
QKVPNFLERVKTKSRMFSKTIVCDLVVMTNHQHFYNGGGRGGAKMSRKLSLPTELKPDLD
KGLRHRHSHLFKKHFSNVDVQKAKVQKEGLSRTRSSPRFNIRDSSFSRSRSSSVTSIDKE
SQEAITSFQFCETFTRKTDSSTVPSLWVGTTLGTVLVFVLNLPPAGEQRLLQPVIILPSG
TLIRLKGAILRMSFLDSTGALYPPACEPWREPNAPNDKDEKDKLRKRRPVSVSPSASQEI
SENQYAVICSEKQAKVIALPSQNCIYKHNITETSFVLRADMVQMSNSICLACFCANGHIM
TLSLPSLRPLLDVNYLPLTDMRIARTFCFTNNGQALYLVSPTEMQRITYSQDMCENLQEM
LGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGESVAGKASRSLAQHIPGPGGIEG
MKGAASGVVGDLARARIALDERGQKLGELDERTAAMMASAESFSKHAHDMMLKYKDKKWY
QF
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtgctggacggcctgtcggcggtctcctcctcctcc
tcttctcaacctggaaacagggacaatgacatccacgagaccctccaatccgaacacttc
cagctctgcaagacggtccgtcatggattcccctatcagccttccgctatggcttttgat
cctgtgcagaaaatcttggccgtcgggacccagaatggatctttgaggctctttggccgc
ccaggagtcgagtgctactgccagcatgacaacggagcagcggtgatccagctccagttc
ctgattaatgagggagccctcgtgagtgccttggcagatgacagcattcacctctggaac
ctgcggcaaaaacgaccggccattcttcattccctcaaattcaacagggagcggataaca
ttttgccatctgcctttccagagtaaatggttttatgttggcaccgaaagaggaaatatt
cacattgtcaatgtggagtccttcaccctctcaggctacgtcattatgtggaataaagcc
attgaactgtcatccaaggcccacccagggccagtcgtccacataagtgataatccaata
gacgaaggaaagcttctaattgggttcgagtctggaacagtagttttatgggacctcaag
tcaaagaaagcagactaccgatacacatacgatgaggctatccactctgttgcttggcat
catgaaggaaaacagttcatatgcagccattcagatggcagtttgaccatatggaatgta
agatcccctgccaagtctgcacagataatcacgccacatggtaagcagccaaaggatgga
aaaaagccagaaccctgcaaacctatcctgaaagtggaatataaaacaaccagggctgga
gatccattcatggttctgtcagggggcctgtcatacgatactgtaggaagaagaccgtgt
ttaacagtaatgcatggaaagagcactgctgtactagaaatggattatccaattgttgat
tttctaacgctgtgcgaaacgccatatcctaatgatgttcaggaaccgtatgctgtagtg
gtccttctagaaaaggatttagtagttattgatcttgctcaaaatggttacccaatattt
gaaaacccttatcctctgagtatacacgaatcccctgttacttgctgtgaatactttgct
gactgccctgtggacctcattcctgcactttattcagttgggtcaaggcagaagcggcaa
ggatatagtaaaaaggaatggcctatcagtggtggtaactggggacttggctcacaaagc
tatccagaaataattatcactgggcatgcagatggatcagtaaaattctgggatgcctct
gcaatgatgctacaagtactgtacaagctgaagacagccaaggtgttcgataaatctcgg
aacaaggatgataagcccaacacagatatagtagatgaggacccctttgccattcagatc
ctgtcctggtgcccagagagcaggatgttgtgtgttgctggagtctccgcccatgttatc
atctataaattcagcaaacaggaagggacgacggaagttgtgcagctactagaagttcgg
ttacagtatgagctcaacgatgttgaatctccagaaggtgaccaggtcccatccctgccg
acccctggggctacttccagctcccagccacccgcaccccagtcccagccctccaccagc
agcagctcttccgacggcattcgggacaacgtgccctgcctcaaagtacgaagcactcca
ctcaaacagtccgcaggctaccaggtggagctggttattcagctggtctgggtcagcggg
gaacctccacaacaaataaccagtcttggagttaactcatcatgtgggcttgtggttttt
ggaaatagtaatggccttgcaatcgttgactaccttcagaagactgttcttcttaaccgt
gggataatcgagttatatggatccaatgatccttatcaaagacagccaagatctcctcgc
aaaacacggcaaccgtctggagcaggtctttgtgatattaatgaaggatccacaacttca
gaagatcgatgcaaatcgccaacttcaggttttacttcgccatgcaattctgatgatgac
caaaaagtgcctaattttctagaaagggtgaagaccaaaagcagaatgttttccaagacg
atagtctgtgatctagtggtgatgactaaccatcaacatttctacaatggaggaggtaga
ggaggagcaaagatgtcacggaaattaagcttgcctactgagctaaagccagacttggat
aaaggattgagacatcgtcattctcatctgtttaagaagcatttttctaatgtggatgta
caaaaagcaaaagttcagaaagaaggactgtccaggactcgctcatccccccgtttcaat
atcagagacagctcgttcagtcgctcgcgaagctccagtgtaacgagcatcgacaaagag
tcccaggaggccatcacatcattccagttttgtgagaccttcacacggaaaaccgatagt
tccactgttccaagcctgtgggtgggcactaccctgggcacggtgctggttttcgtactg
aacctcccgcccgcaggagaacagaggcttctccagcctgtcatcattttgcccagtggt
acattaataagactgaaaggggctattttgaggatgtcatttctagactcaacgggagcg
ttgtatcctccagcctgcgagccctggcgtgagcccaacgcccccaacgataaggatgaa
aaggacaagttaaggaaacgacggcctgtgtccgtttccccatcagcctctcaggaaatc
agtgaaaaccagtatgcagtgatctgttcagaaaaacaagccaaggttatcgcactgcca
tcccagaactgcatatataaacacaatatcacagagacttcttttgttctccgggctgac
atggtgcaaatgagcaacagcatctgccttgcctgtttctgtgctaatggacatatcatg
actttaagtttgccaagtctaagaccgctgttggatgtaaattacctgcccctgaccgat
atgcggatagccagaactttctgctttaccaacaacggacaggctttatatctcgtctca
cccactgagatgcagcgaataacctacagccaagacatgtgtgagaatttgcaggagatg
ttgggagagctgttcacaccagtagaaacacccgaagcaccaaacagaggtttctttaaa
gggctatttggaggtggcgcacaatcgctggacagagaagaactttttggtgaatcagtg
gctgggaaggcctctcggagtcttgcccaacatatccctggcccagggggcatagaaggg
atgaagggagcagcgtctggggtcgtgggggacctggcccgagccaggatagctctagat
gagaggggacagaaacttggagagctggatgagaggacagcagccatgatggccagtgct
gaatcattctcaaaacacgcacacgatatgatgctgaagtacaaagataagaagtggtac
cagttctga
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integrated database retrieval system
