Polyodon spathula (Mississippi paddlefish): 121316997
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Entry
121316997 CDS
T07273
Name
(RefSeq) pleckstrin homology domain-containing family G member 1-like isoform X1
KO
K23859
pleckstrin homology domain-containing family G member 1/2/3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121316997
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
121316997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
RHG20_PH
PH_10
IQ_SEC7_PH
SICA_alpha
Motif
Other DBs
NCBI-GeneID:
121316997
NCBI-ProteinID:
XP_041108418
LinkDB
All DBs
Position
6:20728631..20840131
Genome browser
AA seq
1572 aa
AA seq
DB search
MPDKEIQGTESISRNEDDYHLPPDALPPLPEVPDGQTALSTVPLGRFHSEKRAFRYCSVR
SMDSSDSDRPVSYSSTSSSASSRDSHCSLGSRTTLVSNSHLGLGLGPALQDRDVGAIRLE
LVPARQLDCRERQGSQVEGSVADEKRLSSVKRTDSKGSGKHNATSTPDVEPASPKLLYVD
RVVQEILDTERTYVQDLQSIVQDYLDCITDQSRLSLGTEERSELFGNIRDIYHFNSELLQ
DLENCNADPVAIAECFVAKSEEFHIYTQYCTNYPRSVAVLTECMRNKALSKFFRERQEAL
QHSLPLGSYLLKPVQRILKYHLLLHEIANHLDKDTEAYDVVLDAIDTMQRVAWHINDMKR
KHEHAVRLQEIQSLLTNWKGPDLISYGELVLEGTFRIQRAKNERTLFLFDKVLLITKKRE
ESYTYKAHILCCNLMLVEVIPKEPLSFSVFHYKNPKLQHTVQARSQQDKRLWILYLKRLI
LENHPAKIPAKAKQAILEMDAAHHPGFHYSPEGEKKAALNSKEGGNPRRVRRKSEPSARL
QRGSKQNEISSDVQKRISVEGSLLSQAAKLGSSDDLLNSSGREGGPVNQSREFLDPTYPS
DPDESLRMHAREQADADDEDDTEQGVELNSKTQTKGGRKRLNSQASENVEKRRSLNVCTR
DLQPSKESKDTGRSGINNSTTSTQSNSDLNVVLGGPQAIRNIWTDHQIRQALFSSQQPAH
QAEEEEDVYQMFVPSVSAPNLNVTRVKEGNRGPGRPCSWHVGQPEQKTPEANSKVIRRAS
SVGEQNSDFKPTISDGNKPKAQDSKSSLQVDEPSRVSTSESSDQLTIDDIENIYDNISYE
DMKSMGLIRREQDYMHIPQGAVAEKTNSGVAFTEMPVSHSGNSGSKDLSLLSDTYKAKAQ
NSVSFGSCELEIVEENIYDTIGVSDPPLDSYKSDTSKQDSFFGLEADFACCDSLGGFISE
ESLQFSEDDTSDHQVPEDRDLLGWVDSSSNSDSLSHRSVADKLSEEVDEIWNDLESYIKK
NEKKPDHLPAAFPVSKHDVQEETHAKSVPDLHREEVHRGAECSASTFSIPENSGFTKTVK
KKLARFSTGSFRFDECDSQKDRSSFSRSSFTSELENLESSQTSTNSILSNTSSESSELGA
DIVDKTKNRVFLMARQYSQKIKKANQMLKMRSPDQENAPGKPKSKLKDLAAILEEKKQGG
PAIGARIAEYSHLYDQILFRDTLPRAQKTGGDNTSESSVRNTPQCQLTSQRYSQLGSDSN
CLDDDWLHATYSNRELSDFISWPDKQAYSHEDQSDATQWKLSQACSVPGLKSVTHPHAPT
QRWSAFISQPNKENFNQEHVYNSLGRRPASAKSNPYNRCQSSSSVMVNNRTVESTGHQNQ
RDRNPVTLNGNSVEDRHHNSMLSHKSEHIAIHEEQQHGVAEQTSENHSDMILQDSQKVLV
VSRNSPLNAQIATQNYFANFKDTDDGDDDEDYVEIKSEDEEQDLASERSLNGGLASSLKE
PCSRRLSLSTPCSPVKTLHSNIGPGVSLIDFTEQDKLNEYLWRVPPENQQNLVQSLRQKF
HCLSSSSFASAS
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgccagataaagaaatacagggtacagagtccatatccaggaatgaagatgattaccat
ctccctccagatgccctgccccccctaccagaggtcccggatggtcagacagcactgagc
actgtccctttgggacgctttcattcagagaagagagcttttcgatactgtagtgttcga
agcatggactcctccgacagcgaccggcctgtgagctacagctccacctcctcctctgcc
tcctctcgtgacagccactgctccttgggcagccgcaccaccctggtctccaacagccac
ctgggcctaggcctgggccctgctctgcaggaccgggatgtgggagcaatccgactagag
ttggtccctgccaggcagctggactgtagagagaggcaggggagccaggtagaagggtca
gtggcagatgagaagaggctgagcagtgtgaagagaactgatagcaagggatccggaaaa
cacaatgcaacatcgacgccggacgtcgagccagccagtcccaagctcctttacgtggac
agagtggtccaagaaatccttgacacagaaaggacctatgtacaagacttgcagagcatt
gtgcaggattaccttgactgcatcactgaccaatcccggctttccctggggacagaggaa
aggtcagagctctttggcaacatccgtgacatctatcatttcaacagtgagctccttcaa
gacttggagaattgcaacgctgatcctgtagccatagcagagtgttttgttgcaaagagt
gaagagtttcacatttatacccagtactgcacaaactacccaagatcagtagctgtgctg
acagaatgcatgaggaacaaggcattgtccaagtttttccgggagcgtcaagaagctctg
cagcattccctcccgctcggctcctacctgctcaagccggtccagagaatcctcaagtac
cacctcctcttgcatgaaatagcaaaccacctggacaaagacactgaggcttacgatgta
gttctggatgccattgacacaatgcagagggtggcgtggcacataaatgatatgaagaga
aaacacgaacatgcagtgaggttacaggagatacagagtttacttaccaattggaaaggt
ccggacttgattagctacggggagctggttttagaaggaacattccgcatccagcgtgcc
aagaatgaacgcactttgtttctatttgataaagttctgcttattactaagaaaagagaa
gaatcctatacatacaaagctcacattttgtgttgcaatttaatgctggtggaagtcata
ccaaaggaaccccttagctttagtgtcttccattacaagaaccccaaacttcagcacact
gtacaggccagatcccagcaggacaaacgactctggattctttatttgaaaagactaata
cttgaaaaccacccagcaaaaataccagcaaaggcgaagcaagctattctggagatggat
gctgctcatcacccaggtttccattatagccccgagggtgaaaagaaagctgctttaaac
tctaaagaaggcggcaatcctaggagggtgaggaggaagtcagaaccgtctgctcgctta
caaagaggttcaaaacaaaatgaaataagttctgatgtacaaaagcggatcagtgtggaa
gggtctctcctgtctcaggctgctaagttgggctcgagtgatgatctcctgaactccagt
ggcagagaaggcggcccagtgaatcagtcccgggagttcctggaccccacctaccccagc
gatccagatgagagtctgcgcatgcatgctagggagcaggctgacgctgatgatgaggac
gatactgagcagggtgttgagctgaactccaaaactcaaacgaaaggaggcaggaaaagg
ctcaacagccaggcttcagagaacgttgaaaagagaagaagtcttaatgtttgcacacgt
gatttgcagccatctaaagaatccaaggacactgggcgctcaggcattaacaatagcact
accagcacacagagcaactcggacttgaacgttgttctgggaggtccgcaagccattcga
aacatctggactgatcatcagatcaggcaggcattattttcaagccaacaacctgcccat
caagctgaggaggaggaggacgtctaccagatgtttgtgccttccgtctccgccccgaat
ctcaacgtcaccagagttaaggaggggaacagaggtcctggaaggccttgcagttggcat
gttggacaacctgaacaaaagacacctgaagcaaacagtaaggttattagaagggcaagc
agcgttggggagcaaaactctgatttcaaaccgaccataagtgatggtaacaagccaaaa
gcacaagacagtaagtcaagcctgcaagtggatgagcccagcagagtttctacttcagag
tcctcagatcagctcaccattgatgacattgagaatatctatgacaacatcagttatgag
gacatgaaatcaatgggcctcattcgaagagagcaggattacatgcatattccccaggga
gcggtggcagagaaaaccaattcaggtgtggcctttacagaaatgccagtcagtcacagt
gggaactctgggagtaaggacctgtctcttctatctgatacctataaagccaaagctcaa
aattctgtttcttttggttcttgtgagctagaaattgttgaggaaaacatatatgacaca
ataggggtttcagacccgcccttggattcatataagagtgacacgagcaaacaggacagc
ttctttggtctcgaggcagactttgcttgctgtgatagcctgggagggttcatctctgaa
gagagcctgcagtttagcgaggacgatacttctgaccaccaggttcctgaggaccgagac
cttttgggctgggtggatagctcctccaattctgattctctttcccacaggtcggtagca
gataagctgtctgaagaggttgatgagatatggaatgacctggaaagctacatcaagaaa
aatgagaagaagccagaccacctcccagctgctttccctgttagcaagcatgacgtgcag
gaggagactcatgctaaaagtgtacctgatctccatagagaagaggtacatagaggagcg
gagtgctctgcatctactttttctattcctgagaactctggtttcaccaagactgttaaa
aagaagctagcgaggttcagcactggcagctttaggttcgatgaatgtgactcacagaag
gacaggtctagtttcagtagatcctcattcaccagtgagttagagaatctggagagctct
caaacctccacgaacagcattctatccaacaccagttcagaaagttcagaactgggagcg
gacattgtggataaaacaaagaacagggttttcttgatggcaagacagtatagccagaag
atcaaaaaggccaatcagatgttaaagatgagaagcccagatcaggagaatgcacctggc
aagccaaaatcaaagctaaaggatcttgcagccatcctggaggagaagaaacaaggaggt
cctgcaataggtgccagaattgcagaatattctcatctgtatgaccagattttgtttaga
gacactcttcccagagcccagaagactgggggagacaatactagtgaatcttcggttagg
aacactccacagtgccagttgacatctcagcgctattctcagttaggttcggacagtaac
tgtctcgatgacgattggctgcatgctacttacagtaacagagagctgtctgatttcatt
tcctggcctgacaaacaagcatactctcatgaggaccagtcagatgctacccagtggaaa
ttgtcccaggcctgctctgtcccaggtcttaagtcagttacacacccacatgcccccact
caaaggtggagcgccttcattagccagcccaataaagaaaactttaaccaggaacatgtt
tacaattctttgggtaggaggccagcctctgccaaatcaaacccgtacaacaggtgtcag
tcctcatcctccgtcatggtaaacaacagaacagtggaatctacaggtcaccagaatcaa
agggacaggaatccggttaccctaaatggaaattcagtagaggacaggcaccataattct
atgctgagccacaaaagtgagcatatcgccatccatgaagagcagcaacatggtgttgcc
gagcaaacatcagagaaccactcagatatgattcttcaggactcccagaaagtcctggtg
gtgagcagaaactcaccgctcaatgcacaaattgccactcagaactattttgccaatttt
aaagacacggacgatggcgatgacgatgaggactacgtggagattaagtctgaggatgaa
gagcaggacctagcctcagaacggagcttgaatgggggattggcgtccagcctgaaagaa
ccctgcagcaggagactctcactcagcactccctgctcaccagtgaagactttacacagc
aacatcggccccggtgtctcgttgattgactttaccgaacaagataaactcaatgaatat
ctttggagagtacccccggaaaaccaacaaaacttagtgcagtctttgcgacagaaattt
cactgtctgagctccagtagttttgcttcagcctcctaa
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integrated database retrieval system
