Polyodon spathula (Mississippi paddlefish): 121317052
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Entry
121317052 CDS
T07273
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4-like isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00562
Inositol phosphate metabolism
pspa01100
Metabolic pathways
pspa04020
Calcium signaling pathway
pspa04070
Phosphatidylinositol signaling system
pspa04081
Hormone signaling
pspa04082
Neuroactive ligand signaling
pspa04261
Adrenergic signaling in cardiomyocytes
pspa04270
Vascular smooth muscle contraction
pspa04310
Wnt signaling pathway
pspa04371
Apelin signaling pathway
pspa04540
Gap junction
pspa04621
NOD-like receptor signaling pathway
pspa04912
GnRH signaling pathway
pspa04916
Melanogenesis
Module
pspa_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
121317052
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121317052
04371 Apelin signaling pathway
121317052
04020 Calcium signaling pathway
121317052
04070 Phosphatidylinositol signaling system
121317052
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121317052
04081 Hormone signaling
121317052
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
121317052
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121317052
09152 Endocrine system
04912 GnRH signaling pathway
121317052
04916 Melanogenesis
121317052
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121317052
04270 Vascular smooth muscle contraction
121317052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121317052
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
121317052
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
121317052
Endocytosis
Macropinocytosis
Phospholipase C
121317052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
PLC-beta_C
C2
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
121317052
NCBI-ProteinID:
XP_041108553
LinkDB
All DBs
Position
6:complement(24399375..24528979)
Genome browser
AA seq
1221 aa
AA seq
DB search
MAKAYTFNWQKPLPSFIQEGAVFDRYEEDPFVFEPNCFFKVDEFGFFLTWKSDGKEGQVL
ECSLINSVRSGAVPKDPKIITALESVGKTETDLEGRIVCVCSGTDLVNLNFIYMVADSAE
TAKQWMEGLRSVIHNFRANNVCPMTCLKKHWMRLSFLTNTNGKIPVRSITRTFASGKTEK
GIFQALKELGLPSGKNDEIEHSVFTFDKFYELTQKICPRTDIEELFKKLNGDKTDYLTVD
HLVSFLNENQRDPRLNEILFPFYDPKRAMQIIETYEPDEALKKQGRMSSDGFCRYLMSDE
NAPVFLDRLELYQEMDHPLAHYFISSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCVELD
IWDGKGEDQEPIITHGKAMCTDILFKDVIQAIKETAFTTSEYPVILSFENHCSKPQQFKM
AKYCEEIFGDLLLRQPLEGYLLEAGQPLPSPNDLKRKILIKNKRLKPEVEKKQLEAFKRL
MEAGETTAPANILEDENEEEIENACPKPTIADPEEEAHPEFKFDSDMSSDDLSQTEAHTN
SVKKVTEEDVTEITDVAEQENNKKGGITVEDEQAWITSYTYVGATTNIHPYLSAMINYAQ
PVKFQSFNVAEERNIHHNMSSFNESVGLGYLKTNAIEFVNYNKRQMSRIYPKGGRVDSSN
YMPQIFWNAGCQMVSLNYQTPDLAMQLNQGKFEYNGSFGYLLKPDFMRRPDRMFDPFSET
PVDGVIAATCSVQVFSGQFLSDKKIGTYVEVDMYGLPTDTIRKEFRTRMVMNNGLNPVYN
EEPFVFRKVILPDLAVLRIAVYDDNNKLIGQRILPLDGLQAGYRHISLRNEGNKPLSLPT
IFCNIVLKTYVPDGFGAIVDALSDPKKFLSITEKRADQMRAMGIETSDIADVPNDSSKND
KKGKVNQVKASVTTQSSSELRQNSTSGQGIGNDAKSDTLVPKVNIDDLKQMKTYIKLTKK
QQKELNALKKKHSKDHSAMQKSHCIHVDKIVAQHDKEKLSYEKLLDKAIKKKGENNCLEM
KKEIEIKLQALSSDHKIKVKEIVAQHTKEWSEMINSHSVEEQEIRDQHLVQQCEHLKKLL
GSVQEQQTQQLKLIHDRQSKEMRANQAKTSMENSKAISQDKSIKNKAERERRVRELNSSN
TKKFLEERKRLAMKQSKEMDQLKKAQDEQIEHLEKQNEQHLKSHHAVSHNQGKRDAADGE
AGSKDGPQTSNSCVKHPQKNN
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcatacacatttaattggcagaagcctctgccatcctttatacaagaaggg
gctgtttttgacagatatgaagaggatccctttgtcttcgaacctaactgcttcttcaaa
gtcgatgagtttggtttctttctcacatggaaaagtgatggaaaggaaggccaggtttta
gaatgttctctgatcaacagtgtacggagtggagctgtcccaaaggaccctaaaataatt
actgcattggaatcagttgggaaaacagagactgatctagagggacgcatcgtttgtgtc
tgcagtggtactgacttggtgaacctgaactttatttacatggttgcagacagtgcagaa
acagcaaagcaatggatggaaggattgagatcagtgatccataacttcagagctaataat
gtctgtcccatgacttgcctaaaaaaacactggatgaggttatcatttttgacaaataca
aatggaaagattccagtgagaagcataaccaggacctttgcatcaggcaaaacagaaaag
ggaatctttcaagcacttaaggaattaggtcttcccagtggaaagaacgatgaaattgaa
cattctgtcttcacttttgataagttttatgaacttactcaaaaaatctgcccccggact
gacatagaggagctgtttaaaaaactcaatggagacaaaactgattatttaaccgtagac
catttagtcagctttctaaatgaaaatcaacgagaccctcggttgaatgaaattctgttt
ccgttctatgatcctaaaagagcaatgcagataattgaaacatatgagccagacgaagca
ctaaagaaacaaggtcggatgtccagcgatgggttttgcaggtatctgatgtcagatgaa
aatgctccagtcttccttgatcgtttggagctgtaccaagaaatggatcaccctttggcg
cactactttataagttcctcccacaacacatatcttactggcagacagtttggaggcaag
tcgtctgtagaaatgtatcggcaggtccttctggcaggatgcagatgtgtagaattggat
atttgggatgggaaaggggaagaccaagaaccaataataactcatggaaaagccatgtgc
acagatattctcttcaaggatgtaattcaagccattaaagaaacagcttttactacatct
gaatatcctgtgatcctttcatttgaaaaccactgcagtaaaccacagcaatttaagatg
gcaaagtactgtgaagagatttttggagatctattattgaggcaaccgcttgaaggttat
ttgcttgaagctggacagcctttgccttctcccaatgacctgaaaagaaaaatactcatt
aaaaacaaaaggctcaaacctgaagttgagaagaagcaacttgaggcatttaaaaggctc
atggaagctggagaaacaacagctcccgccaatattttggaagatgagaatgaagaagaa
atagaaaatgcttgccccaaaccaacaattgccgacccagaagaagaagctcatccagaa
ttcaagtttgacagtgacatgtcctctgatgatttgagtcagacagaagcccatacaaac
agtgtgaagaaggttactgaagaagatgtaactgaaataacagatgtagctgaacaggaa
aataacaaaaagggtggtataactgtagaggatgaacaggcttggatcacttcatatacg
tatgtaggtgctacaactaacattcacccatacctctcagcaatgattaactacgctcag
ccggttaagtttcaaagctttaatgtggcggaagaaaggaacatccatcacaacatgtca
tctttcaatgaatcggttggactgggttatttgaagactaatgccatagaatttgtaaat
tataataaacgccaaatgagtcgaatctaccccaaaggaggcagagtggattccagtaat
tacatgcctcagatcttctggaatgctggctgccagatggtctcactgaactaccagacc
ccagatttggcaatgcagttaaaccagggcaagtttgagtataatggatcattcgggtac
ttgctcaaacctgacttcatgcgacgacctgaccgaatgtttgaccctttttcagaaaca
cctgttgatggtgttattgcagctacttgttctgttcaggttttttcaggccagttttta
tcagacaagaaaattggcacatatgtagaggtggacatgtatgggttacccacagacacc
attcgcaaggagttccggacccgaatggtcatgaacaatggtctgaaccctgtttacaac
gaggagccttttgtatttagaaaggtgatactgcctgaccttgctgtactcagaattgca
gtttatgatgacaataacaagttgattggtcagagaattctacctctggatggtcttcag
gctggctacagacacatctccctacgaaatgaaggcaacaaacctttatcactgccaacc
attttctgtaacattgttttaaaaacatatgttccggatggatttggagctattgttgat
gctttgtctgatccaaagaagtttttatcaatcacggaaaagagggctgaccaaatgagg
gctatgggtattgaaactagtgacattgcagatgtgccaaatgacagctctaagaatgac
aaaaaaggaaaggttaaccaagtcaaagcaagtgtgacaactcagagcagctctgagttg
agacaaaattcaacgtctggccagggaattggtaatgatgccaagtcagacacacttgtg
cctaaggtgaatattgatgacttaaaacaaatgaagacctatattaagctgacgaagaaa
cagcaaaaagagctgaatgccttaaagaaaaaacactccaaggatcacagtgccatgcag
aagtcacattgtatacatgttgacaaaatagtggcacagcacgataaagagaaactgtct
tatgaaaagcttctggataaagctattaaaaaaaaaggagaaaacaactgtcttgaaatg
aagaaagaaattgaaattaaactccaagcattatcatcagaccacaaaataaaggtaaaa
gagattgtggcccaacataccaaggagtggtcagagatgatcaactcccacagtgtggag
gagcaggagattcgggatcagcatttggtccagcagtgtgaacatctgaaaaaactctta
ggttctgttcaagagcagcaaacccagcaacttaagcttattcatgacaggcagagcaaa
gaaatgcgtgctaaccaggctaagacatctatggaaaacagcaaagccatcagtcaagat
aaatcaatcaaaaataaagctgaaagggagaggagagtgagggaattgaacagcagcaac
actaaaaagtttctggaagaaagaaaaaggcttgcaatgaagcagtctaaagaaatggat
caactgaagaaagctcaagatgagcagatagaacacctggaaaaacagaatgagcagcat
ttgaaatcacatcatgcagtgtctcacaatcaaggcaaaagagatgcagcagatggtgaa
gctggaagcaaagatgggcctcagaccagcaacagttgtgtgaagcatccccaaaaaaac
aactag
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