Polyodon spathula (Mississippi paddlefish): 121317062
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Entry
121317062 CDS
T07273
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1-like isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
121317062
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
121317062
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Motif
Pfam:
GDPD
CBM_20
C2_GDE1
PI-PLC-X
Motif
Other DBs
NCBI-GeneID:
121317062
NCBI-ProteinID:
XP_041108579
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All DBs
Position
6:25762678..25789218
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AA seq
677 aa
AA seq
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MACTRVTFQVKGTTSPGEFIAVCGSCEALGSWFPNKAVFLEQDKNDCTLWKKAVAVPRGA
PTNYRYFKGFFLTSKNAGDPCPVIVNKWETHQHPRALNPSEPELLVDDGNFGFYNDQECV
DSGWLTFQTEIRLRLHYSEKPPVSISKKKFKKSRFRVKLTLEGCEDDDDDDDEEKLSPSS
WHKMATTLGISLISNDDYKSRHSQPDFGYALDPNLWTEYSIHTMDPDNLELTFEFFEEDL
SEAVVKGDAVPGHVGTACLLSSTFVDTGKNTGFVILPIMGRNSRQTIGKVRVDYIVIRPI
EGQICDMSTSFTKYWKKRTALDVGHRGAGSSSHMDRYAKVRENTIASFKSAASHGAAFVE
FDVHLSKDSVPIVYHDLTCCISMKKKSDNDSLELFEIPVKELTFDQLQLLKLAHAAAVKV
NDPTDSVLDEEDYIAEHQPFPSLLQILQAVPEHVGFNIEIKWLCQLKDGTWEGNLSTYFD
MNLFLDIILKCVLQNAGKRRILFSSFNADICTMVRQKQNKYPILFLTQGFSGVYPELIDL
RSRTTSIAMSFAQSEDILGINVHTEDLLRNLDYIKEVKSKGLVLFCWGDDNNDHENRSKL
KEYGVDGLVYDRICDVQPEQPNIFEMEQLEGVKNSIPEEALKSCATSSICLTCCSVCSCK
QETGSTESDSGISNASF
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtacccgggtcacttttcaagtgaagggaacaacatctccaggtgaatttata
gcagtttgtggcagctgtgaggctctcggaagctggtttccaaataaagctgtgttccta
gagcaagataaaaatgattgcacactgtggaaaaaagcagtcgctgttccaagaggggca
cctacaaactatcgttattttaaaggcttttttctgacgtctaagaatgcaggtgatcca
tgtccagtcatagtcaataagtgggagacccatcaacatccacgagcattgaatccttca
gaaccagagctgcttgttgatgatggcaactttggtttttataatgaccaagaatgtgta
gattcaggatggttaacatttcagactgaaattcgcctgcgacttcattactctgaaaag
ccaccagtatcaatttcaaaaaagaagtttaagaaatccagatttagggtgaagctgaca
ttggagggctgtgaagatgatgatgatgatgatgatgaagagaaactgtctccttcctcc
tggcacaaaatggcaaccactctgggaatctctttaatcagcaatgatgattataagtcc
cgtcattcccagccggattttggttatgctttagaccccaacctttggaccgagtacagc
attcataccatggatccagataacttggaattgacatttgagttttttgaggaagatttg
agcgaggcagtagttaagggagacgcagtgccaggccatgttggaactgcttgcctgtta
tcttctacttttgtggacactggtaaaaacactggattcgtcatacttcccatcatgggt
aggaactccagacagactattggaaaagtgagagttgactacattgtaataagaccaatt
gaaggtcagatatgtgatatgagtacttcatttaccaaatactggaaaaaacgaactgct
ttggatgtgggtcataggggagcaggaagctcctcgcatatggacaggtatgctaaagtc
agggagaatacaattgcttcctttaaaagtgctgcaagtcatggtgctgcttttgtggag
tttgatgtgcacctttccaaagacagcgttccaattgtgtaccatgaccttacttgttgt
atatccatgaaaaagaaaagtgacaatgattctttggaattatttgaaatccctgtgaag
gagcttacgtttgaccagcttcagttattaaagttggctcatgcggctgcagtcaaggtg
aatgaccctacagattctgttttagatgaggaagattatattgcagagcaccagcctttt
ccttcacttttgcaaatcttgcaagctgtaccagaacatgtgggttttaacattgaaatt
aaatggctctgtcaactaaaagatggtacctgggaaggaaacctgtccacctactttgac
atgaacctgtttcttgacatcattctcaagtgtgtgcttcaaaatgcaggaaaaagaaga
attctgttttcctcattcaatgcagatatttgcacaatggttcgtcaaaagcagaataaa
taccctatcctgtttctgactcaaggcttttctggagtctacccagagctaatagatctc
aggtctcgaaccacctcaattgcaatgagttttgcacagagtgaagacattttgggaata
aatgtgcacacagaggatttgctgagaaaccttgactacataaaggaggtaaaatcaaaa
ggtttagtcctcttctgctggggcgatgataacaatgaccatgaaaacaggagtaagctc
aaagaatatggagtcgacggactggtttatgataggatctgcgatgttcagcctgagcag
cctaacatcttcgaaatggaacagctagaaggtgttaagaatagcataccagaagaagcc
ctgaaaagctgtgccacttccagtatttgcctgacttgttgttctgtgtgctcctgcaag
caggagactggtagcacggagtctgattcaggaatcagtaatgcttcgttttaa
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