Polyodon spathula (Mississippi paddlefish): 121317066
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Entry
121317066 CDS
T07273
Name
(RefSeq) GDNF-inducible zinc finger protein 1-like
KO
K22402
GDNF-inducible zinc finger protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121317066
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121317066
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-met
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
Complex1_49kDa
Zf-C2H2_ZNF451
zf-C2H2_11
zf-Di19
DUF7501
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
121317066
NCBI-ProteinID:
XP_041108586
LinkDB
All DBs
Position
6:complement(25844275..25850780)
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AA seq
961 aa
AA seq
DB search
MESSRITMESKVAASNMLNALHSLYQFGYLCDVTVQTVQQGIHEEFSAHKAVLAASSNYF
RELFVSEELSVAKSPTVTLQDVYTEDFTSFLEFVYTARVQIQQEKLQRLKEVAEKLDCKD
LLEVCNGFITNERQDSKLPSPPRVMTLRSKSPCLGQTSKIKSSAITFMLCDQTPKKSMQQ
IKQKHKLRKEASTKEIGEDVASCNTKTSVTKSSDQNQSKTEESKDDGGEGAGESDQNKTG
CIKWTPPLDLNTCIVIRRISEVKEEDCERNTSLRRSLRSASSWLKETYTCDTCNETFKTV
NKYQAHMGKEHGINVVVKYSCDLCTQLFTNPKNFRQHKLTVHNDERRYACKLCDKRFKRQ
KDINDHIRKVHEKKRSPQACPYCDKIISSKGGLTVHIRIHTGEKPYKCAACPAGFAQKSS
FNTHVRNMHLSGIERKPRPVYWKLVPPNEDSVFDKEVGSDGSTCNPLDGNTLNANCNKKM
KNEEQKSLPKNVGKNNIREKSSLPFNKASTDKKPGSSPSTKKLGSERDAKDRVGDDAGEL
NENGVKSDGFNQEQVEETDEEDEDEYEGVEASGGDSEYEEFKDVNGSQMKRKCRGSKLGV
GMVVNPNKEQYVIKCDKCDKQFTFRKKFVAHYEEVHKSLPEKFYKCETCGKSFANYSCWK
EHRACVHSDERKYACTLCNAAFKRKRDVRTHYLRRHEGRYKRPLCSVCGKILSSRTALVF
HMRTHTGEKPYQCSVCNGRFAQPSQLKLHVRSHTGEKPYICEVCGSCFSGKSKLDIHRRT
HTGERLYKCDMCGKNFSTKQYLKCHKRCHLGAKPFKCEVCGKTFGLRASLAQHSKVHAET
RPYSCDQCGKTFTQQGALRRHQRIHTGEKPYKCKACDRTFTDMSTLRRHVAVHDRKADWR
SYAIDLTTKKVHNWSKIETLGGACIDDSPVNHDFTDMLEQAHQELEKHKVRKGAAIPNVS
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggagtccagcaggatcaccatggaatccaaagtagctgcttccaacatgctaaatgct
ctgcattctctgtaccagtttggttacctctgtgacgttactgtccagacagtgcaacag
gggatccatgaagagttttctgcccacaaagctgtattagctgcttccagcaattatttc
cgggaactttttgtcagtgaagagctgtcagttgccaaatcacccacagtaaccttgcag
gacgtctatacagaagacttcactagcttccttgaatttgtctacactgcaagagtgcag
atccagcaagaaaagctgcagaggttgaaagaagtggctgagaaactggactgcaaagat
ctgttggaggtttgcaatggtttcataaccaatgagagacaggattcaaagctaccatcc
ccgcctagagtaatgaccttgaggagtaaaagcccttgcttaggtcagacttctaaaatt
aaatcctcagctataacatttatgctatgtgaccaaaccccaaaaaagagtatgcagcag
attaaacaaaaacacaagctcaggaaagaagcatctacaaaagagataggtgaagatgtt
gcctcctgcaatactaagacctctgtgacaaagtcatctgaccagaatcaatcaaagaca
gaagaatctaaggatgatggtggtgagggtgctggtgaatctgatcaaaataaaacaggc
tgcataaaatggacaccccccttggacttgaacacctgtatagttataaggaggatctct
gaggtaaaagaagaggactgtgaaaggaacaccagtctacgaaggtcccttaggagtgcc
tcaagttggctgaaggagacttatacctgtgatacatgcaatgagacatttaagacagtg
aacaagtatcaggcacatatgggcaaagagcatggtattaatgttgtggtcaagtacagc
tgtgacttgtgcacccaactctttactaaccctaaaaacttcaggcagcacaaactaact
gtccacaacgatgagcgacgctacgcttgcaagttgtgtgacaagaggtttaaacgccaa
aaagacattaacgaccacatcagaaaagtacatgagaaaaaacggtctcctcaggcttgc
ccctattgtgataagattatcagttctaaaggtggccttacagttcatattcgtatacac
acaggagaaaagccatacaaatgtgcggcctgtccagccggctttgcccagaagtcctcg
ttcaacacccatgtgagaaacatgcacttgtctggtatagagaggaagcctagacctgta
tactggaagcttgttccaccaaatgaggattctgttttcgacaaggaagtcggtagtgac
ggcagcacctgtaacccattggatggaaacactttaaacgcgaactgcaataaaaaaatg
aaaaacgaagagcagaaaagcttacctaaaaatgtaggaaaaaataatattagggagaag
agcagcttgccttttaataaagcatcaactgataaaaagccaggaagctcacctagtaca
aaaaaattgggaagcgaacgtgatgcaaaggacagggtaggagatgatgcaggggagctg
aatgaaaatggtgtgaagagcgatggattcaaccaagaacaagttgaagaaacagatgag
gaagacgaggatgaatatgaaggagtcgaagcctccggtggtgattccgaatatgaggag
ttcaaggatgtgaacggcagtcaaatgaaaagaaaatgcagaggctcgaaactaggagtc
ggcatggttgtcaatcccaacaaggagcagtacgttatcaagtgcgataagtgtgacaag
cagttcacctttcggaagaaatttgtggcccactacgaagaggtacataaatcccttccg
gaaaagttctacaagtgcgagacctgtggcaagtcttttgccaactacagctgctggaag
gagcaccgggcctgtgtgcactccgatgagaggaagtatgcctgcaccctctgcaatgcc
gccttcaagcggaagcgagatgtccgcactcactacctacgcagacatgagggccgatac
aagcgtcctctgtgctctgtctgcggcaagattctgagctccaggaccgccctggtgttc
cacatgaggactcacactggagagaaaccctaccagtgctctgtgtgcaacggaaggttc
gcccagccatcacagctcaagcttcacgtaaggtcccacactggagagaagccttatatc
tgtgaggtgtgtggttcttgtttttctggcaaaagcaaattagacattcaccgaaggaca
cacacaggcgagcggctgtacaaatgtgatatgtgcgggaagaacttttccactaagcaa
tacctgaagtgtcacaagcgatgtcacctgggagccaagcctttcaagtgtgaagtctgc
ggtaaaacatttggccttcgagcttcgttagctcagcacagtaaggtgcatgcagaaacc
cgtccatattcctgtgaccagtgtgggaaaacattcacccagcagggggctctgcgacgt
caccagagaatccacactggggagaagccttacaaatgcaaagcctgtgaccggactttc
actgacatgtccactttgagaagacatgttgcggttcatgatcggaaagcagattggagg
agctatgcaattgatcttaccaccaagaaagttcacaattggtccaaaatagaaacatta
ggaggggcatgtattgatgatagcccagtgaatcacgattttactgatatgctcgaacaa
gcgcatcaagaactggaaaaacacaaagtcagaaaaggcgctgcgattcccaatgttagt
tcttaa
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