Polyodon spathula (Mississippi paddlefish): 121317079
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Entry
121317079 CDS
T07273
Name
(RefSeq) H2.0-like homeobox protein isoform X1
KO
K09339
homeobox protein HLX1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121317079
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121317079
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121317079
NCBI-ProteinID:
XP_041108605
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Position
6:complement(26815966..26819123)
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AA seq
378 aa
AA seq
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MYTTGLNPFYASNFSLWSAYCSSGFALDSVKKPSFCIADILHVGDSENILGSSALVAHLG
PHHQLQPSGSPLRPSPVAPESSVFSSRMSPASPYHRHPGLHGAHSTSMVQLNGSSPQAQA
PSSKDLKFGIDRILSSEFDPNVKECTTRRDLTSISSHCQPGLHLSIQPSASQFFASLEPG
IGEPSSIMNHLGSGARYSAQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRK
GLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKEKETPEQP
EKSPVSAVFEEEQKQNDSECESGGSDSEFEDMHDKGDIEVTEDNKTSVIKSSSSTDEATQ
STEPSTETMARPSSQIVL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtatactacaggactaaacccattttatgcttctaatttcagtctgtggtctgcgtat
tgttccagcggctttgccttggattcagtgaagaaaccgtcgttttgcatcgctgatata
ttacatgttggagactctgaaaacattcttggatcttcagcactcgtagctcatttggga
ccccatcatcagctccagccgtcaggatcacctctacgcccatctccggtggcaccagag
tcttcggtttttagttcaaggatgtccccagcctctccttaccacaggcaccctggactt
catggagcacactccacatctatggtgcagttaaacggttcttcaccacaagcacaagct
ccttctagcaaagatctgaaatttggcattgatcgcattttatcttcggaatttgatcct
aacgttaaagaatgcacaactcgaagagatcttacatccattagctcacattgtcagcca
gggcttcatctgtccatacagccttcagcaagccaattcttcgcgtctttagagcctgga
attggcgaaccttcctccatcatgaaccatttaggcagcggagcaagatattcagctcaa
caccagtttcaagacacgttcccagggccatatgcagttcttactaaagacacaatgcct
cagacatacaaaaggaaacggtcgtggtccagggctgtcttctccaacctccagagaaaa
ggattagagaaaagatttgaaatccagaagtatgtcaccaagccagacagaaaacaacta
gcagcgatgctgggcctaacagacgctcaagttaaagtgtggtttcagaacaggagaatg
aagtggaggcattccaaggaagctcaggcccaaaaagagaaggaaacgcctgagcagcct
gagaagtccccagtctctgccgtctttgaggaagaacagaagcagaatgattctgaatgc
gagagtggagggagcgactctgagttcgaggacatgcatgacaaaggtgacattgaagtc
acagaagacaacaagaccagtgttatcaagtcctcttcgagtactgatgaggcaacacag
agcacagagcccagtacagagacgatggcacgaccctcatcgcaaattgtattataa
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