Polyodon spathula (Mississippi paddlefish): 121317127
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Entry
121317127 CDS
T07273
Name
(RefSeq) left-right determination factor 2-like
KO
K04668
left-right determination factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121317127
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121317127
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Transforming growth factors (RSTK binding)
121317127
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
DUF5422
Motif
Other DBs
NCBI-GeneID:
121317127
NCBI-ProteinID:
XP_041108685
LinkDB
All DBs
Position
6:32060764..32063109
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AA seq
362 aa
AA seq
DB search
MGRFTTWVLCAMLIVLVEGFTHEDMKDAMLKKLGLNEVPKIQKRDLENLVIPAHIKNKYM
SMLNLHNARKRRSLPSLAGILRGIPGNADISGEILYSDTTRQRMVFDMQARIPENSEVTM
AELKLFKKAPQKLPLSDKRSHRPVNNARVSVYWVEILADGSNRTSLVDSRLVPIHETGWK
SFDVTQGVQYWLKTSRDAPMYLEIWIEGERPGSYAAEMAKCVRFTSQGPSDRTLGKPELV
LYTLNLEEFGSRGDCEESTAKKNNVCCREEYFINFRELTWTQYWIIEPAGYQAFRCAGGC
KQPKNPLRHYGYGERTCAVVESTPLPMMYLVKKGEYTEIEVAEFPNMIVEKCGCTMDNIS
VV
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggtttactacatgggtgctctgtgccatgttaatagtcctggtggaaggattt
actcatgaagatatgaaagatgccatgctaaagaaactggggctaaatgaggtgcccaaa
atccagaagagggacttggagaatttggtcatccctgcacacatcaagaacaagtacatg
tctatgctcaaccttcacaatgcaaggaagaggagatccctgcccagtctggctgggatc
ttaagaggaattccaggaaatgcagatatatctggagaaattctgtattcagacaccacc
cgccagagaatggtttttgatatgcaagccagaatcccagaaaacagtgaagtcacaatg
gcagaactcaaactattcaagaaggcaccccaaaagctgcctttgtctgacaaaaggagc
cacaggcctgtcaataatgctagagtcagtgtctactgggttgaaattctggcagatgga
tccaacagaacttcattggtggactctaggttggtgcccattcatgaaactggctggaaa
agctttgatgtaacacaaggggtccaatactggcttaaaaccagcagagacgcccccatg
tacttagagatctggattgaaggagagagacccggaagttatgctgctgagatggccaaa
tgtgtacgattcacatctcaaggcccgtcagacagaactttggggaaacctgaactggtc
ctctacactttgaatcttgaagagttcggctctcgtggcgactgtgaagaaagtactgca
aagaaaaacaatgtctgctgcagggaggaatattttattaacttcagggagctcacctgg
actcaatattggatcatcgagccagccggttaccaggcattccgctgcgcaggaggatgc
aaacagccaaagaatccacttcgtcactatggctatggagaacggacttgtgctgttgtt
gaaagcaccccgctgcccatgatgtacctggtgaaaaaaggagaatacaccgaaattgaa
gtagcagaattccctaatatgatagtcgaaaagtgtggctgtacaatggacaacatatca
gttgtttaa
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