Polyodon spathula (Mississippi paddlefish): 121317135
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Entry
121317135 CDS
T07273
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03410
Base excision repair
pspa04210
Apoptosis
pspa04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121317135 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121317135 (parp1)
04217 Necroptosis
121317135 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspa03032
]
121317135 (parp1)
03036 Chromosome and associated proteins [BR:
pspa03036
]
121317135 (parp1)
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121317135 (parp1)
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
121317135 (parp1)
DNA replication proteins [BR:
pspa03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
121317135 (parp1)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121317135 (parp1)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
121317135 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
WGR
PADR1_N
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
121317135
NCBI-ProteinID:
XP_041108699
LinkDB
All DBs
Position
6:complement(33422851..33500888)
Genome browser
AA seq
1006 aa
AA seq
DB search
MANSQEDKLYKSEYAKSGRASCKKCKENIAKESLRMAIMVQSPMFDGKVPHWHHFSCFWQ
RARVLSPGDIDGFSDLRWEDQEKIKKAIETGGVTAGGKGDKEGSGKAEKTLSDFAVEYAK
SNRSTCKGCEQKIDKEQIRVSKKMVDPEKPQLGMIDRWYHIGCFISRREELGFMPAYNAS
QLKGFPNLKAEDKEELNKRLPAVKSEGKRKADEVDGDSTKKKKQKKADKEEKQLEKQLKD
QSQLIWNIKDEMKKCSSTNDMKELLIANKQEVPSGESAILDRISDCMAFGALKPCEECQG
QLVFKSDAYYCTGNITAWTKCVFKTQTPNRKDWVIPKEFHEIPYLKKFKFKRQDRIFSPA
PVSPPPTTTNSSAPSLGAAPVPEDKPLTNMKILCIGKLVKSKDVLKTVIEELGGKTTGTA
NKATLCISSKKEVEKMSKKMEEVKEANVRVVSEEFLTDIKSSGKALQELLALHGISSWGA
EVKLETSATKSVGMPAGKSSGKVKEEEGSSKSKKMKLTVKGGAAVDPDSGLEDGAHVLDQ
NGKIFSATLGLVDISRGTNSYYKLQLLEDDVKKRYWVFRSWGRVGTTIGGNKLDKFSDKN
AAIDNFLSVYEEKTGNSWHSKNFTKYPNKFYPLEIDYGQDEEAVKKLTASAGTKSKLAKP
VQELIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSILSEVQQTVSAGGSDSQ
ILDLSNRFYTLIPHDFGMKKPPLLNNLEYIQTKVHMLDNLLDIEVAYSLLRGGAEDDKKD
PIDINYEKLKTKIEVVDKESKVFNLILDYVKNTHAATHNSYSLEVEDIFEIVREGEYQRY
KPFQELPNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGVYFADMVSKSANYC
HTSQADPVGLILLGEIALGNMHELKKAAHISKLPKGKHSVKGLGKTAPDPSATVTLDGVQ
IPLGKGVSTNIPDTSLLYNEYIVYDAAQVNLKYLLKIKFNYQTSLW
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactctcaagaagacaagctttacaaatccgaatatgcaaaaagtggacgggca
tcttgcaaaaaatgcaaagagaacattgcaaaggagtccctccggatggcaattatggtt
cagtctcctatgtttgatggcaaagtccctcactggcatcacttttcatgcttctggcaa
agagccagagttctgtcccctggggatattgatgggttttctgacttgagatgggaagat
caggagaagatcaagaaagccatcgaaacaggaggggtgactgctggaggtaaaggtgat
aaagagggcagcggtaaagcagagaagaccttgagtgattttgctgtggagtatgctaaa
tccaacagaagtacctgtaaggggtgtgagcagaagatagacaaggaacaaattcgtgtg
tccaagaagatggtggatcctgagaaacctcagcttggtatgatagatcgttggtaccac
attggctgcttcattagtagacgagaagagcttgggttcatgccagcatacaacgcatct
cagctgaaaggatttcccaatttaaaggcagaagataaagaagagctgaacaaaaggctc
ccagctgtcaaaagtgaaggaaagagaaaagccgatgaagtagatggagattccaccaaa
aaaaagaagcagaaaaaagcagacaaagaagaaaagcagttagagaagcagctgaaggat
caaagtcagttaatctggaacattaaagatgagatgaagaagtgcagctccacgaacgac
atgaaagagctgctgattgcaaacaagcaagaagtgccttccggggagtctgctatcctt
gacagaatttctgactgcatggcatttggtgccctgaaaccgtgcgaggaatgccaaggg
cagctggtatttaagagtgatgcgtattactgcactggaaacatcacggcatggaccaag
tgtgtctttaaaacacagacacccaacaggaaggattgggtcattccaaaggagttccat
gaaataccctacttgaagaagttcaagtttaaaaggcaggacagaatcttttctcctgcc
cctgtgtctccccctcccaccacaacaaactccagtgctcccagtcttggtgctgctcca
gtaccagaagacaaacccctaacaaacatgaagatcctttgcattgggaaactggtcaaa
agcaaagatgtgctgaaaactgtaattgaggaattaggtggaaaaacaactggaacagct
aacaaagctaccctgtgtatcagctcaaagaaagaggtagagaagatgtccaagaagatg
gaagaagtgaaagaggccaatgttcgggtggtctctgaagagttcttgaccgatattaag
tcctcaggcaaggccctgcaggagctgctagctcttcatgggatctcatcctggggagca
gaggtgaagctggaaacctctgccaccaagtctgttggcatgccagctggaaagagctct
gggaaggtgaaagaggaggaaggctccagtaaatctaagaagatgaagttaactgtaaag
ggaggagctgctgtggaccctgactctggtctagaagatggtgctcatgttcttgatcaa
aatggtaaaatctttagtgcaactctgggactggtggatatcagccgaggaacaaactct
tactacaaattacagctgctggaagatgatgttaaaaagcgatattgggtctttaggtca
tggggccgtgtgggcacaacaattggaggtaacaagttggataagttctctgataagaat
gcagccatcgataatttcctgtcggtttatgaagagaaaactgggaactcctggcactca
aagaactttaccaaatacccaaataaattctatcctctggagatagactacggacaggac
gaagaggccgtaaaaaaactaacagccagtgccggtaccaaatccaagctggctaagcca
gtccaagaacttataaagatgatctttgacgtggagagcatgaagaaagctatggtggag
tttgagattgacttgcagaagatgcctctcggaaaactaagtaaaaggcagatccagagt
gcatactccatcctcagtgaggttcagcagactgtttctgctggaggttcagactcacag
atcctggatctgtctaatcgtttttataccctcattccacatgactttggaatgaagaag
cctcctctcttgaacaacctggaatatattcagaccaaagtccatatgttggataacctc
cttgacattgaggttgcgtacagccttctgcgaggaggagctgaagatgacaagaaagat
cccattgacatcaactatgagaagctcaaaactaagattgaggttgttgacaaggaatcc
aaagtgttcaacctcattttggattatgtcaagaacactcatgctgctacgcacaactcc
tattctcttgaagttgaagatatctttgaaatagttcgtgagggagagtaccagcgttat
aagccattccaggagcttcccaatcgccagttgctttggcacggttctcgcaccacaaac
tttgcaggcatcctttctcagggtctgcgcattgccccacccgaggctccagttactggt
tacatgtttggaaaaggcgtttattttgctgacatggtctcaaagagtgccaactactgc
cacacctcccaggctgatcctgtgggtctgattctgctgggtgagattgctctaggaaat
atgcatgagctgaagaaagctgctcatatttctaaattacctaagggtaaacacagtgtt
aaaggtttgggtaaaactgccccagatccaagtgctactgttactttggatggagtgcaa
attcccttgggaaaaggtgtttcaacaaatattcctgacaccagtctgctctacaatgaa
tacattgtgtacgatgcagcacaggtgaatctcaagtacctgttgaaaataaaattcaac
taccagacttccctgtggtga
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