Polyodon spathula (Mississippi paddlefish): 121317149
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Entry
121317149 CDS
T07273
Name
(RefSeq) EMILIN-1-like
KO
K24246
emilin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121317149
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
121317149
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
Collagen
Apolipoprotein
Hydro_N_hd
Baculo_PEP_C
Snapin_Pallidin
BLOC1_2
ATG17_like
DUF948
DUF1664
FliJ
KELK
Motif
Other DBs
NCBI-GeneID:
121317149
NCBI-ProteinID:
XP_041108723
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All DBs
Position
6:complement(35270170..35400451)
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AA seq
1092 aa
AA seq
DB search
MAGFVPCLLFSFFTLLGVVWSASYPQRYNLYTGQLQATQPQQQNGLRAASRHRNYCAYVV
TRTVSCVVENGVETYVKPDYQPCSWGSSQCSRVVTYQTYMRPTYKMAYKMVTEMEWKCCH
GYSGDDCSEGPTGGQSQGTQISTVRPRPKPIRLGQTGSSSGNVQIEGEGRHDSDKVKQLE
EKVQSLTKELHDLQSTLRGMNEKFHEEIRKTLETAVNGKQPADAAHPEMKETLSDIQRRI
QHLDNRTQVHDKELNHLNNKSHTNGEGGGNFIEHSDIKMNQKLTDLKGEIVRDLEKSLQQ
SCSACQSQVEKLRRQQGEDRDRIRGLEKLINSVDQRNKQVMDIVHKHVSSSSNQPSRDCC
AQVDQIKHKVSDVERNLHSVSETYYVLNGRLDNELAEIEKDCILNREEKISALLEDLESR
LNITERNAAEYCLFLQTGIKGYFHKEIDDLRNEFNDRFDENGAKISNIVKNVDNLKDIVV
EHGEGLDKVFILTSDMDTHLTSAVNSCAEICVSNGPQLPEDDNSKVSDVVKNLEWKVIVN
EGEIRNFGNKIKNLSISGWSLRNTVIDIGHDVQKLKTLTGHNGEHFNTIVTNIENLEKEL
DSTTSTSLTICSSVENQLVSLRNETEDYLDKLAMDLNNIRNRVDSGETACAQICSNLQEE
VGKLKEVEKCSEQCKVFLKRPDEGQAGGDGLNQQKPLDGHSVIGGTSSVNLKSIQGELSE
VILTFSSINDTLKGLEHTVQKHTSVILDLGTTKDKIISEINKIQQEVNEHIEDSKGRFDH
FSREIHQFGNNFMVKMGDCKESSDGLEKRISKMENLCGKLDTVSGSLERIKDGLNKHVSS
LWNCVHGLNSTVITHSGYLDTIQNTQLEGINQRLNVLNSSMLTIFKEFQDFTLQDFMGPP
VKQGERGPPGPQGIPGRDGATGRPGEQGPMGPPGIRGEQGLSGLNALVPRVSFSAALTYP
QVDAGTILFDKVLVNDGHFYDPSTGIFKAPYDGRYFFSAILTGHKNEKIEAVLSKSNYGI
ARVDSSGYQPEGLENKPVAETKPTPGSLAVFNIILPLKTGDTVCIDLVMGKLAHSDEPLT
IFNGALLYEDDV
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctttgtcccatgtttacttttctccttttttactcttttgggagtggtgtgg
agtgcatcatacccccagagatacaacctttatacagggcagctccaggcaacacagccc
cagcagcagaatgggttgagggcagccagcagacaccggaactactgtgcatatgtagta
actcgaacagtgagctgtgtggtggagaacggtgtagagacctatgtgaagccagactac
cagccatgctcctgggggtcgagtcagtgctctcgtgtagttacgtaccaaacatatatg
agacctacgtacaaaatggcttacaagatggttactgagatggagtggaagtgttgtcat
ggttactcaggagatgactgcagtgaaggacccacaggaggccagtcacaagggacccaa
atctccacagttaggccccgacccaaaccaatacgcctaggacagactggttccagctct
gggaatgtacagatagaaggagaaggaagacatgactctgacaaggtgaaacagttagaa
gaaaaggtccagagtctgaccaaagagctccatgacctccagtccaccctgcgaggaatg
aatgaaaagtttcatgaggagatccgcaagaccctggagacagctgtcaacggcaagcag
ccagctgacgctgcccacccagagatgaaggaaaccctcagtgacattcagagaaggata
cagcatcttgacaaccgtacccaggtgcatgacaaagagctcaaccacctgaacaacaaa
tctcatacaaatggtgaagggggtggaaacttcattgaacattcagacattaaaatgaac
caaaaactcactgacttgaagggagagatcgtgagggacttagaaaaaagtctccaacag
tcttgctcagcctgccaatcgcaagtggagaaattaaggagacagcagggggaagacaga
gacaggattcgggggctagagaaactcattaactctgtggaccagcggaacaagcaggtg
atggacattgtgcacaaacatgtgtcaagttcatccaaccagccttcaagggactgttgt
gcccaagtggaccagatcaaacataaagtcagtgacgttgagaggaatctgcattctgtc
tctgagacgtattatgttttgaatggacggctggacaacgagttggccgagattgagaag
gactgcattttgaatagagaagagaaaataagtgcccttctagaagacttggaaagccgc
ctaaacatcacagagaggaatgcagcagagtattgtctctttctccaaaccggcataaag
ggttatttccataaggagatagatgacttgaggaatgagtttaatgataggtttgatgaa
aatggggcaaaaatatctaacatagttaaaaatgtggacaacttaaaggacatagttgtt
gagcatggtgaaggccttgacaaagtcttcatcctcacatctgacatggatactcatttg
acttcagcagttaacagttgtgctgaaatctgtgtcagtaatggtcctcaacttccagaa
gatgataattctaaagtgtcagatgtagtgaaaaatttggagtggaaggtcattgtaaat
gaaggagaaattcgaaactttggaaacaagataaagaacctctcaatctctgggtggtca
cttaggaacacagtgatagatattggccatgatgtacagaaactgaagaccttgacagga
cacaatggtgaacatttcaatacgattgttactaacatagagaaccttgagaaagaactc
gattccactacctctacaagtcttaccatttgcagctctgtagaaaaccaacttgtttct
ctgcggaatgagacagaagactacttagataaactggctatggatctgaataacatacgt
aatagagtggattctggggagacagcttgtgcccaaatatgctcaaacctacaggaagaa
gtcgggaaactaaaggaagtagaaaaatgcagcgaacaatgtaaggtattcttgaagaga
ccagacgaaggccaggcaggaggggatggtctaaaccagcagaaacctttggatggccac
agcgttattggcgggacttccagtgtcaacttgaagtctattcaaggagagctttcagag
gtcattctgacattcagttccattaatgacacactcaagggtcttgagcatacagtgcag
aagcacactagtgttatccttgacctggggaccactaaggacaaaatcatctctgagatc
aacaaaatccagcaggaggtgaacgagcacattgaggacagcaaaggcaggttcgaccat
ttcagtagggagatccatcagtttggtaacaacttcatggtaaaaatgggtgactgtaaa
gagtcatctgacggcctggaaaagaggatttccaagatggagaacctttgcggaaagctt
gacacagtgtcaggcagcttggaaagaattaaggatggtctaaacaagcatgtgtccagc
ctctggaactgtgtccatgggttgaatagcacagtcattacccacagtggctacttagac
accattcagaacacacagctggaaggaattaatcaacgactaaacgtcttgaactcatcc
atgctcaccatattcaaggagttccaggactttacccttcaggactttatgggtccacca
gtcaaacagggagagagaggacctcctggaccacaggggattccaggcagagatggagcc
acaggcagaccaggagaacaagggccaatgggaccaccgggtatcagaggcgaacaaggt
ctttctggtttaaatgctttggtaccaagggtttcattttcagcagctctgacataccca
caagtggatgctggaacaatccttttcgataaggtcttagtgaacgacggtcacttctac
gatccttctactggaatctttaaggctccttatgatgggcgatacttcttcagtgccatc
ttgactggccataagaatgagaagattgaagccgtgctctccaaatccaactatgggatt
gcacgggtggactcatccggataccagcctgaggggctggagaataaaccagtggctgaa
acaaagcctaccccaggctccctagccgtcttcaacatcatcctcccgctgaagactgga
gacactgtctgtattgacctggtcatgggcaaactggcacactctgacgagccgctcaca
attttcaacggggcacttttatatgaagatgatgtgtaa
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