Polyodon spathula (Mississippi paddlefish): 121317152
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Entry
121317152 CDS
T07273
Symbol
nup133
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121317152 (nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121317152 (nup133)
03036 Chromosome and associated proteins [BR:
pspa03036
]
121317152 (nup133)
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121317152 (nup133)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121317152 (nup133)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
HDAC4_Gln
TolB_N
Motif
Other DBs
NCBI-GeneID:
121317152
NCBI-ProteinID:
XP_041108732
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Position
6:36114678..36236439
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AA seq
1144 aa
AA seq
DB search
MEKNMFSQRASTGSARRSTGPSGSRGRNSLAPSVASVIFSPVRRTSLLARGTPTRAAQNP
ATNEAVNYDVKTFGSSLPVKVMEALTMAEAEDQLTVRVDERGWAWLVFGEKLIIWKIGQT
AVAKFSVCKELQLPPSEFSCLADLVAISCPSNAGDVAPVQAISVMAVSREGTARYWPNLA
HEGSYSDTAVDLCGNLGNFLIALKGSGFVLSSSKNHLVRLGPDSSGKLQQRTLQQGQGVL
SGIGRRVSSLFGMLATPTDVTLHSLLWDKEKDCLYTLTSSNVNKWEVDENSERQVFSWDI
SRTLKENIADAIWGSESNYEEIKAGVNVKYLDLQLGQDGLVILAAAWHPRDTPCVAYYSL
VTVEDQGYHMSDELSVEVTKYNPPFQSEEELLNCQFVLPRFSGQAAYLFTEELVFACSTG
TGRGAVPEEKISFSFPGDRLLGAGCCADLPVFFSRNSGLLAVVARESASILPEDMEDSLS
SSVTGAAVEATLLESSSRMETIAQEDKTKILKAAFLRFCRRDILGAQSMVDEIFPPDSDL
DADAELDRTVIQVSVDLVDDYPSSDPRWAESVPDETVGFSQTSLILLHQLEDKMKAHCFF
IDFLLQVGLFERLGTAQVRGIPLATRLLLCEHGEKLSAAIVLKNHHSKLPDQVNAGILIA
LNKKGTDIPPSLTPADVFFREVSQIDSIFECFLVEEERVLKEVHVETVEWAQIVVDLNNI
IKDMLQAAGQYRQTQASRYQNTDSSKKEPEYIPWTASSGVAGVRTVIVRQHEIILKAVYP
QADTVLRNTLSEQLVALLDSYLDGYVSQLRSLNRLSDQERYNNLEKEYTQKRSDLLSPLL
SLGQYQWVAALAEKYCDFDILVQMCEQTDNQSRLQRYMTKFADQYFSDFLFRWYMEKGKR
GKLLSQPISQHEQLASFLQSHEHLSWLHEINIQDFEKAHKTLYALANTETRYFAKKKTLL
SLSKLAALASDFPEDLVQEKVEEIAEQERFLLHQETLPKQLLDEKQLIPDTMPLLTAHNL
INLYICDENRRANEYDFKKALDLLEYIDQEDVDIEALKCDIFCKALQRDDWSSSDGNDDP
IEAAKDSIFIKILQKLIKEGISLKKYLPDVKDLLQSEELERLLSKSYFEFVLRANYEHYQ
ELQM
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatatgttttcccaaagagcatctactgggtcagcccgcaggtcaaccggt
ccctcaggctctcgaggcaggaacagtttagcaccctcggtagcatctgtgatcttctct
ccggtacgaaggacttcattactggcgagaggaacacccacaagagcagcacagaatcca
gctaccaatgaagctgtaaactatgatgtcaagacgtttggatcttcacttcctgtgaaa
gtgatggaagcgctcacgatggcagaagctgaagatcaattaactgtccgagtagatgag
cgtggatgggcttggctggtctttggggagaaactgattatttggaaaatcggacagacg
gctgtggctaagttttcagtgtgcaaggagctgcagcttcctcccagtgaattttcttgt
ttggctgatttggttgccatatcatgtccgagtaatgctggagatgttgcccctgtacag
gccatttcagtaatggctgtctctcgggaaggaactgctcgttactggcccaatctggca
catgagggcagctactctgatacagctgtagacctttgtggcaacctcggcaacttccta
attgctttgaagggaagtggatttgtattgtcctcctccaaaaatcatctagtgcggctt
ggtccagacagttctggaaaactccagcagcgcaccttgcagcaggggcagggagtcctg
tcaggaatcggacgcagggtttccagcctctttggtatgctggctactcccactgatgtc
acactccacagcctgctttgggataaagagaaggattgcctgtataccctaactagcagc
aatgttaataaatgggaagtcgatgaaaactcagagcggcaggtattcagctgggacata
agcagaaccctcaaagagaacattgctgatgcaatctggggttctgaaagcaattatgaa
gaaattaaagctggtgtcaatgttaagtacctggatttacagcttggccaggatggactg
gtaattctggcagcagcatggcatccaagagacaccccctgtgtggcttactattccctc
gtcacagtggaggaccaaggttatcatatgtctgatgagctttctgtggaagttacaaag
tacaaccctccttttcagtctgaagaggagctgctgaattgccaatttgtgctcccccgc
ttttctggtcaggctgcctacctgttcactgaagagctggtctttgcctgttccactggc
acaggaagaggggctgtgccagaagagaagatctctttcagtttcccaggggacaggctc
ttgggagcaggctgctgtgcagatctacctgtcttcttctctaggaacagtgggctgctt
gctgtggttgccagggagagtgcttccatactgcctgaggacatggaagattcactgtcc
tcttctgtaacaggagcagctgtagaggctactctactggagagctcttcaagaatggag
accatcgctcaagaagataaaactaagatactgaaagctgcctttttaagattttgccgg
agagatattctgggtgcacaaagtatggtagatgaaatatttccaccagactccgatttg
gacgcagacgctgaacttgacagaactgtgatacaagtcagtgttgatttggttgatgac
tacccttcatctgacccaagatgggctgaatctgttcctgatgagacagttggatttagt
cagacatcattgattcttcttcatcagctggaggataaaatgaaagcccattgctttttt
attgacttccttctccaagttggactgtttgaaagactcggcacagctcaggtgcgtggc
attcccctggcaactcgtcttctactgtgtgagcatggagaaaagctctctgctgccatc
gtcctgaaaaatcaccactcaaaactgccagatcaggtcaatgcaggcattctcatagct
ttaaacaagaaaggcactgacatcccaccaagtctaactccagccgacgtgttctttaga
gaggtctcccagattgactctatctttgagtgttttctggtagaagaggagcgagttctg
aaagaagttcatgttgagacagttgaatgggctcagattgttgtagacttaaacaacatt
ataaaggatatgttgcaggctgctggtcagtatcgacagacccaagcttcccgttaccag
aacacagacagcagcaagaaggagcctgaatacattccttggacagcatccagtggtgtt
gcaggagtcagaactgtgatcgtccgtcagcatgaaatcattttgaaagcagtatatcct
caggcagacacagtcctgcgcaatactctcagtgaacagctggtggcactgcttgactcc
tacttggatggatatgtgtcccagctacgctccctgaatagactgagtgaccaggaaagg
tacaataatctggaaaaggagtacacccagaagcgttcagatttgttatctcctctattg
tccttgggccagtatcagtgggtggctgctcttgctgaaaaatactgtgactttgacatc
ttagtacagatgtgtgaacagacagataatcagagcagactacagcgctatatgaccaag
tttgcagatcagtacttttcagactttctgttccgctggtacatggaaaaaggcaagagg
ggaaagctgctttctcagcccatatcccaacacgaacagcttgccagtttcctgcagtct
catgaacacctgagctggctacatgagatcaacatccaggattttgagaaggcacataag
acactgtatgcattagcaaacacagagacacgatactttgcgaaaaagaagactcttctc
agtctcagtaaactggcagctctggcatctgactttcctgaagatttagtgcaggaaaag
gtggaagagatagctgagcaggagcgcttcctactccaccaggagacgctgcctaaacag
ctcctggatgagaagcagctgattcctgacaccatgcccttactgactgctcacaatctc
atcaatctttacatctgtgatgagaatagaagagctaatgagtacgatttcaagaaagca
cttgatcttctggagtacattgatcaggaggacgttgatattgaggcactcaaatgtgac
attttctgcaaggctcttcaaagagatgactggtcatcttcagatggaaatgatgacccg
attgaagcggcgaaggacagtatattcataaagatattgcagaagctcattaaagaagga
atttctcttaaaaaatatttgccagatgtgaaggatttgctacagtcagaagaacttgag
agacttctgtcaaaatcttactttgaatttgtgttgcgggccaactacgagcactatcag
gaactacaaatgtga
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