Polyodon spathula (Mississippi paddlefish): 121317156
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Entry
121317156 CDS
T07273
Symbol
abcb10
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121317156 (abcb10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121317156 (abcb10)
Transporters [BR:
pspa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
121317156 (abcb10)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA
AAA_21
AAA_29
Zeta_toxin
DUF87
AAA_25
AAA_5
RsgA_GTPase
nSTAND1
AAA_33
AAA_14
P-loop_TraG
AAA_30
Motif
Other DBs
NCBI-GeneID:
121317156
NCBI-ProteinID:
XP_041108737
LinkDB
All DBs
Position
6:36381823..36425416
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AA seq
728 aa
AA seq
DB search
MSSRIITVCLPKKKIGIWMRCIRTNRFSLCTGTGKNGLLECREEIHRGHLKRVRIRLGIL
GNTVCPLSIRTSSPFALSRCYESNSFSVANRPWKRLGPTKTECTSSAERQQVADIDSEDK
KGKEPIRGNEKRLNRLFSEDSRKLLQLAHPERWRLAAAVGFLGVSSMVTMAAPFYLGRVI
DVICANPVGDTSATLTSLCAMLSGVFLCGATANAARVYLMQISGQQIVRNLRESLFSSIL
RQEVGFFDKTRTGELINRLSSDTALIGRSITENLSDGLRALAQATAGVGMMFYVSPALAT
LVLCIVPPFAVLAVVYGRYLRKLSRMTQDSLAEATQLAEERIGNIRTVRAFGKEFTEVEK
YISKINYVFQLAKKEALVRAGFFGATGLCGNLIVLTVLYKGGLLMGSDQMTVGELSSFLL
YAFWVGVSIGGMSSFYSELMKGFGAGARLWELLDRQPEFPLNEGFTLRPDQLKGALEFQD
VTFSYPTRKDASIFQGLSLSVPAGSVMAVVGPSGSGKSTLVSLLLRLYDPDSGVITIDGR
DVRELNPYWLRNNIGTVSQEPVLFSCSIAENIAYGALDPSQVTAEEIYRAAEFANANTFI
QNFPKGFDTVVGEKGILLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYVVQDAL
DRLMDGRTVLIIAHRFSTIQNADAVAVLDQGRVVECGKHKQLLENPQGLFRKLMEKQAIL
QNSQTLAQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgtatcatcacagtttgccttcctaaaaaaaaaatcgggatatggatgagg
tgcattcgaacaaaccggttcagtttgtgcactggtactggtaaaaatggattgcttgag
tgtcgtgaagaaatacatcggggtcatttaaagcgagtccgaattcgattgggaatcctt
ggaaacacggtatgtccgctgtcaataaggacaagttcaccatttgctttatcaaggtgc
tatgagagtaactcattcagtgtggctaacagaccctggaaaaggttaggtccgacaaaa
actgagtgtacgtcatctgcagaaagacaacaagtagcagatatagacagtgaggacaag
aaaggaaaagaaccaatcaggggaaatgagaagcgactcaatcggctattttctgaagac
agcagaaagcttctacaactggctcacccagaacggtggcgactggcagctgctgtgggt
ttcctgggtgtttcgagtatggtcacgatggccgcacctttctacttgggaagagtcatt
gatgtcatctgtgccaatcccgtaggggacacaagcgccacactgacctccctgtgtgca
atgctgtccggagtgttcctctgtggtgctactgctaacgctgccagggtctacctcatg
caaatctcaggacaacagattgtgagaaatttacgagaatcccttttttcctcaattttg
aggcaggaggtgggattctttgacaagacccgtactggagagctcattaatcgcctgtcc
tcagacacggcccttatagggcgctcaattaccgagaacctctcagatggactcagagct
ctggctcaggcaacagccggggttggcatgatgttttatgtttcacctgctcttgctacg
ttggtcctttgcatcgtccccccttttgccgtcctggctgtggtctatggaaggtacctg
cggaaattgtcccgaatgacccaagattcattggcagaagcaacacagctggctgaggaa
cggattggaaatataagaactgtccgggcttttggaaaagaattcactgaagtggagaaa
tacatcagcaagatcaactatgtctttcagctggcaaaaaaagaagcacttgtccgggca
ggcttctttggagccacgggactgtgtgggaacctgattgtgctcactgtgctgtacaaa
ggggggctgctcatgggcagtgaccaaatgacagttggggaactctcctcctttttactt
tatgccttctgggtgggagtgagcattggaggtatgagctctttttattcagagttaatg
aaaggctttggagcaggggcacgattatgggagctgttagacagacaacctgaatttcca
ctgaatgaaggctttactttgaggccagatcaactgaaaggtgcactggagttccaagat
gtgactttctcttacccaacccgtaaggatgcatccatttttcaaggtctcagcttgtcc
gttccagcgggctctgtgatggctgtagttggtcccagtggctcaggaaaatcaacactg
gtatctttgctgttaagactgtatgatcctgactctggtgttattacgattgatggtcga
gatgtgcgtgaactgaacccatactggctgcggaacaacattgggactgtgagtcaggag
ccagttctgttctcatgctctattgcggaaaacattgcctacggagcactggatccttct
caggtcactgcagaggagatctacagggcagctgagtttgccaatgccaacacttttatc
cagaactttccaaagggatttgacactgttgttggagagaaaggcatcctgctgtcaggt
ggtcagaaacagaggattgcaattgcccgggctttactcaagaatcccaaaattctcttg
ctagatgaagccaccagtgctctggatgcagagaacgagtacgtggtacaggacgccctg
gatcggttaatggatggacgcacagttctgattattgcccaccgcttctccaccattcag
aatgctgatgctgtagccgtcttggaccagggccgagtggtggaatgcggaaaacacaag
cagttgttagaaaacccacaaggtctgttcagaaagctcatggaaaagcaagctattcta
cagaacagccagacacttgcacaatga
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