KEGG   Polyodon spathula (Mississippi paddlefish): 121317174
Entry
121317174         CDS       T07273                                 
Symbol
riox1
Name
(RefSeq) ribosomal oxygenase 1 isoform X1
  KO
K16914  protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pspa03009]
    121317174 (riox1)
   03036 Chromosome and associated proteins [BR:pspa03036]
    121317174 (riox1)
Enzymes [BR:pspa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121317174 (riox1)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     121317174 (riox1)
    1.14.11.79  protein-L-histidine (3S)-3-hydroxylase
     121317174 (riox1)
Ribosome biogenesis [BR:pspa03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    121317174 (riox1)
Chromosome and associated proteins [BR:pspa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121317174 (riox1)
SSDB
Motif
Pfam: RIOX1_C_WH JmjC_2 Cupin_8 Cupin_1 Cupin_2
Other DBs
NCBI-GeneID: 121317174
NCBI-ProteinID: XP_041108759
LinkDB
Position
6:39373380..39411707
AA seq 591 aa
MEDPRVSAFEIYRALSAENASQNQEKVKREENGLHVSKNSRRTKRKHNKIKVPKELPKDV
LSKMKSAKQEGVHKPNIGVKEVLNCSATERTDGRLHKGKVLKQKKAKREQDAAETVTSLP
TKLPGSAKPLVGPALETVFEELGKIQNSNDRAAKLFNWFISPIPAKKFFSEIWEKKPALI
RRHNPDYYKGLFSTAEFDRILRDNDVQYGVNLDVTSYSNGERETHNPPGRALPFNVWDFY
KNGCSLRMLNPQAFSVTVWNVLSILQEQFGSMAGANVYLTPADTQGFAPHYDDIEAFVVQ
LEGKKHWRVYNPRTKEEVLPRLSSPNFSQDEIGEPILEVVLEAGDLLYFPRGFIHQGDCL
SDTHSLHITISSFQKNSWGDLLDKLLPAALQIAIEEDVEFRQGLPLDYLSYMGVQNSEKD
DPRRTNFTEKLQGLIKKLAKFAPVDAAVDQKAKDFLHDCLPPVLTEEEKATSVFGVPTRW
EDGDARDVAVQIDGKTKIRLLRKGVARLCSEGEAVILYHTVENSRIYHKEEPKFFEVDSE
HTDSVEFLIHSYPTYVTVESLPCEIQDDKISIAELLFEKGLLLTKNPLPSS
NT seq 1776 nt   +upstreamnt  +downstreamnt
atggaggatccacgtgtttctgcttttgaaatttatagagcattgtcagccgaaaacgct
tcgcagaaccaggaaaaagtaaaaagggaagaaaatggtttacatgtttctaagaatagc
aggaggacaaaaagaaaacacaataagatcaaagtcccaaaagagctcccaaaagatgtg
ctgagcaagatgaagtctgcaaagcaggaaggtgttcacaagcccaacattggcgtcaaa
gaggtgctgaattgcagtgcgacagaaaggacagatggcaggctccacaaggggaaggtc
ttaaaacagaagaaagctaaaagggagcaggatgctgctgagactgtcacatcactgcca
acaaaattaccaggaagcgcaaagcctttggttggaccagcacttgagacagtgtttgaa
gaactgggaaagattcagaacagtaacgacagggctgccaagctctttaactggttcatc
tctccaatccctgcaaagaagttcttcagtgagatatgggaaaagaaacctgcgcttatc
aggagacacaacccagactactacaaaggattgttttccacggcagagtttgataggatt
ctgagagataatgatgttcagtatggggtaaatctagatgtaacaagctacagcaatggc
gagagagagacgcataacccacctggaagggcactgcctttcaatgtttgggatttttac
aagaacggctgttccttgcggatgctgaaccctcaggccttttctgtcacggtgtggaat
gttctttccattcttcaggaacagtttggaagcatggctggtgcaaatgtgtacctcact
cctgctgacactcaggggtttgcacctcactatgatgacattgaagcgtttgtggttcag
ttggaagggaaaaagcactggcgagtctataacccaagaacaaaggaagaagttctgccc
cggctttccagtcctaatttcagtcaggatgagatcggagagccaatcttggaggttgtc
ttggaggctggagatctactgtattttcctagaggttttatccaccaaggagattgtctc
tctgacactcactctctccacattactatctcctctttccaaaagaacagctggggggac
ctgcttgataagcttcttcctgcagcattgcagatcgctattgaggaggatgtggaattc
agacagggcttgcctttagattatctcagttatatgggagtacagaattcagaaaaggat
gacccgagaagaacaaacttcactgagaaactgcaaggtttgattaaaaagctggccaag
tttgcacctgtggacgctgcagtggatcaaaaagcaaaagatttcctacatgactgcctt
ccacctgtgcttacagaagaggaaaaagcaactagtgtttttggcgttccaacgaggtgg
gaagatggagatgccagagatgtggctgtgcagatagatggaaagacgaaaattcgactc
ctgcgaaaaggtgttgcaagactgtgcagtgagggagaagctgtgatcctgtatcacaca
gtagaaaattccagaatctaccacaaggaggagccaaagttttttgaagtagattctgag
catacagatagtgttgagttcctgatccattcttatcccacatatgtgacagtggagagc
cttccttgtgaaatacaggatgacaagatttccatagctgagctcttatttgaaaaaggc
cttcttctcactaagaaccccctgccctcctcttga

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