Polyodon spathula (Mississippi paddlefish): 121317177
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Entry
121317177 CDS
T07273
Name
(RefSeq) centrosomal protein of 170 kDa-like isoform X1
KO
K16463
centrosomal protein CEP170
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121317177
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121317177
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CEP170_C
FHA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
121317177
NCBI-ProteinID:
XP_041108764
LinkDB
All DBs
Position
6:complement(39821332..39924324)
Genome browser
AA seq
1628 aa
AA seq
DB search
MSLTSWFLVSSGGTRHRLPREMIFVGRDDCELMLQSRSVDKQHAVINYDSATDEHKVKDL
GSLNGTFVNDVRIQEQMYVTLKMEDKLRFGYDTNLFTVVRGELRVPEEALKHEKFTSQLH
LPQKTSEGKGSKAASTKAAEAKAAEAGEGLPKCAEAQKLEEKMSDMAAVHRGTPLYGQPS
WWGDDDADDENSFKQETKAGRKKLEGSASGENKETKKAEAQGGNEEALCSLCREPSYFEI
PTKEFQQPAPVVESTIHEIPTKDTEGAHAAAAGHASFTIEFDDNTPGKVTIKDHMTKFNP
DQRPRPKKSSPQGGKELSTLQATMIAAESKVSDWLAQNDPPMARRESTEDDSKSIKSDVP
VQLKRLKGSKHEDGTQSDSENGAKHRHTSKRAALEEHVRVYQGPKGLAAASVEGKGTEGT
HISRTDFMVEFFDEDNPHMCHSYSFTQNGASAMEAVAGEGPCLTPPSGPKGLVPTDCKGV
PSVLAAPPPSKLLLKQKLEDPSLVRSSASVGQQTSPNEEPEKPPKATGTVEKENEDDQSD
KGTYTIELENRNPEEEEARRMIDKVFGIEESQDHTRPVVAEQQKETIKDWASSGMVEMRK
SQFVTAAFIDSETIPEGPVSVGSPRWVSQWASLAANHSGHEPDDLRSESPSFVAQEKEAD
VSESGISVKSITSATSTSSHGERKRRTLPQLPTEDKVKAKAVKGTTSLGLRSEIGEKQDT
EPQEKEKSSRPSHKGREADRTSRTSHKAPSGSQIVLPPSQQKEKSDSAKGTLVVKQAMAK
IQQQDQRSSQPQWAASKQAPGTKPPVSAEKSREMSSKHGSLVEKTSTNTDCKDEAKRRRA
DSPRSQISKVGESEKECGKPLVRQGSFTVEKPSTNVPLELIPRISKQGRDRSDSVGTDSS
MDTTVLLKDTEAVMAFLEAKLREENKLDGETDSPSYHLDNSISPESDVDTASTISLVTGE
TERKSAQKRRTLSSLCKEKSTISSSSRDHSKTAASARERLEKKTKSRNSDSRSEARRSTQ
ASARARQSSLDLTDDDQTFSLPHCMISGIQSSDKEIYSGRSHGRGQFTSTDELLHSKLEA
SKSAKTKVLQASSTGPGKPATLPRPRPTRASLLRKARLGETSDNELADTDKASVASEVST
TSSTSKPPLGRKTPSRIDLLAQPRRTRLGSLSARSDSEAIVSRSSASSRTPDLALRSSLR
PSSATDGKIVPRMRANSVSKLPDSKSKISLSAHSSPSEKSQPTPDTEAAVEDLMANARWR
RLPPDYASTSEDEFGSNRNSPKHSRLRAGTALRSTRLQTTAPPGPGGVVLKHRMREQEEY
IRDWTAHSEEIARLFPCVRRISQDLAKDLATLAREIHDVAGEIDSVSSPSTAPSTTVSTA
ATTPGSAIDTREEVGQPRGGMQKLVDRVFDESLNFRKIPPAMQSKAPEINGRAVELRPRT
EAPDPQAAIRRRTWNRDEAVLDSLLLTSVSQLSSKVRQAVDKTAGKIRILFKDKDRNWEE
IENKLRAESDMPLLKTSNKEISSILLELKRVEKQLQVINVMVDPDGTLDALSNLGLTSPV
LPKPRSSPSSRGTRAAAPPQVAPELRTARLGLISASSELDSVESDRDFSLHFNRFNPSGE
EEDSVVHE
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaacgtcctggtttctggtgagcagtggaggcacccgtcaccggctgccaagg
gagatgatttttgttggccgtgacgactgcgaattgatgttgcagtcccgaagtgtggat
aaacaacatgctgtcatcaactatgattctgcaacagatgaacacaaagtaaaggaccta
gggagcctaaatgggacatttgtgaacgacgtcaggatacaggaacagatgtatgttacc
ttgaagatggaagataaattgagatttggatatgatactaatcttttcacagtagtccgt
ggggagctccgtgtcccagaggaagcattgaagcatgagaagtttacaagccaactccat
ctgccccagaagacttcggagggaaaaggatccaaggcagccagcactaaagcagctgaa
gccaaagctgccgaggctggtgaagggttacccaaatgtgcagaggcacagaaactggag
gagaagatgtcagacatggctgcagtgcaccggggaactcctttgtatgggcagccatct
tggtggggagacgatgatgctgatgatgaaaactccttcaagcaggaaaccaaagcaggg
agaaagaagctggagggcagtgcatcaggagaaaacaaagaaaccaagaaagcagaagcg
cagggagggaacgaggaagcgctttgttcactgtgtagggagcccagctactttgagatc
cccacaaaggagtttcagcagcctgccccagtggtggagagcacaattcacgaaatcccc
acaaaagacaccgaaggggcccatgcagccgctgcagggcatgcttccttcaccatcgaa
tttgacgacaacacccctggaaaagtgactatcaaagaccacatgacaaagtttaaccca
gaccaacgcccacgaccaaagaagtcatcccctcagggcgggaaagagctgtcaacattg
caggccaccatgatagccgctgagagcaaagtttctgactggctggcacaaaatgacccc
ccaatggccaggagagagtccactgaagacgattcgaagagcataaagagcgatgtcccc
gtccagctgaagagattaaaagggagcaaacacgaagatgggacacagagtgactcagag
aatggagccaaacacaggcacaccagtaaaagggcagcactagaggagcatgtgagggtc
taccaaggtcccaagggactcgctgccgcttctgtcgagggcaagggtacagaaggtact
cacatcagcaggacagactttatggttgagttttttgatgaagacaacccgcatatgtgt
cactcttattcttttactcagaacggcgcttcagcaatggaagccgtggctggggaaggc
ccttgtctcacccctccttctgggccgaaaggtcttgtccccacggactgtaaaggagtt
ccttcagtgctggcagccccaccgccaagcaaactgcttctgaagcagaaattagaagat
ccatccctggtacggagctcagcaagtgttggacaacaaaccagcccaaatgaagagcca
gaaaagccacctaaagctacgggaacagtggaaaaggaaaacgaggatgaccaaagcgat
aagggaacctataccattgaactggaaaatcgcaatcctgaggaggaagaggctcgaagg
atgatcgataaggtgtttggcatagaagagagtcaggaccatacaaggccagttgtagct
gaacaacaaaaggaaaccatcaaagattgggcctcttcaggaatggtggagatgagaaaa
agtcagtttgtaactgctgcattcattgactcagagactattcctgaaggccctgtttca
gtgggcagtcctcggtgggtgtcccagtgggcgagtttagctgcgaatcactcagggcat
gaacctgatgacttgagatcagaatccccatcttttgttgctcaggaaaaagaagcagat
gtcagcgagtcaggaatctctgtgaaaagcataacctctgccacctccacatccagccat
ggtgaacgaaagagaaggactcttcctcagctcccgacagaggacaaagttaaggcaaag
gcagtaaaaggtactacatccctgggactgagatcagagattggagagaaacaggacact
gaacctcaggagaaagagaaatcaagccgtccatcccacaagggaagagaggctgacagg
accagcaggacttcccacaaggcccccagtgggagccagattgtcttaccaccttcccag
cagaaggagaagtccgacagtgccaagggaacgttggtagtcaagcaagccatggctaaa
attcaacagcaggatcaaaggagcagccagccccagtgggccgcatccaaacaggctcct
ggcaccaagccccctgtgagcgctgagaaaagcagagagatgtcctcaaagcatgggagc
ttggttgagaaaacaagcaccaacacggattgcaaagatgaagccaagaggaggagggca
gatagcccaagaagccagatttctaaagtaggtgagagtgaaaaggagtgtggtaagcct
ttggttagacaaggcagcttcactgttgaaaaacccagcactaatgtccccttggagctc
atccccagaatcagtaaacagggacgagacaggagtgactctgtaggcactgattccagc
atggacaccacagtgcttctaaaagacacagaggctgtgatggccttccttgaggccaag
ctgagagaagagaacaagttggatggtgagacagactctcccagttaccacttggacaat
tccatctcaccagagtcagacgtggacacggctagcaccatcagtctggtgacaggggaa
acggagcgcaagtctgcccagaaacggcggacactgagcagcctctgtaaggagaagagc
accatcagctcctcttctcgggaccattccaagactgctgccagtgcccgggagaggctg
gagaagaaaaccaaaagccgtaactcggatagccgaagcgaagcacgcagatccactcaa
gccagtgcccgggccaggcaatcatccctggacctgacagacgatgaccaaaccttcagt
ttacctcactgcatgatctcaggcatacaatcttctgataaagagatatactccggccgt
tcacatggcagaggacagttcacgtccacagacgaactcttacattccaaactggaagcc
agcaagtctgccaaaaccaaggttctgcaggcctcctccacaggccccggcaagccggcc
actttacccagacccaggcctacccgtgcatctctcttgcgtaaggcacgccttggggaa
acctcagataatgaattagcggacactgataaagcatcagtagcctcagaggtgtccacc
accagctcaacatccaagcctcccttaggacggaagaccccctctaggatagacttgctg
gcccagccaaggagaaccaggctgggctcactttcggcacggagcgactcggaagccatt
gtcagtcgtagcagcgccagctctcgcacgcctgacttagccctcagaagcagcctgagg
ccatcttccgccacagacggcaagatcgttcccaggatgagagctaacagtgtctccaaa
ctgcccgactccaagtccaaaatctccttatctgctcatagctctccttcggagaaatcc
cagcctaccccagatactgaggctgctgtagaagatctaatggcaaatgcaaggtggaga
cgcttacccccagattatgcctctacatcggaagatgagtttggatcaaaccgcaactca
cccaaacacagccgcctgcgagctggcacagccttgagaagcaccaggctgcagaccaca
gcccctccaggccctggaggagtggtcctgaagcacagaatgagagagcaggaggagtac
attcgcgactggactgcacacagcgaggagattgccaggttatttccatgtgtgcgtagg
attagtcaagacctggccaaagacctggcgaccctcgcacgagagatccatgacgtggca
ggagagatcgactcagtgagctcgcctagcacagcccccagcaccacagtaagcactgca
gccaccaccccaggctctgccattgacaccagggaagaggtagggcagcctcgtggagga
atgcagaagttggtggatcgagtgtttgatgaaagcctcaacttcagaaagattccccct
gctatgcaaagcaaggctccggagatcaatggacgagctgtcgagcttcgtccccgtaca
gaggcccctgacccccaggcagccattcggagaagaacctggaaccgggatgaagctgtg
ttggacagtttattgcttacttctgtgtctcagctgtcatcgaaagtaagacaggcagtg
gacaagactgctggcaaaatcagaatactatttaaggacaaggacaggaattgggaagaa
attgaaaacaagttgcgagctgaaagtgacatgccacttctgaaaacatcaaacaaggag
atttcatcaatcttgctggagctgaagagagtcgaaaaacaactacaggttatcaacgtc
atggttgaccccgatggcactctggatgccctaagcaacctgggattgaccagtcctgtc
ctgccaaagcctaggtcaagccccagctcacgaggcacgcgggcagcagctcccccacag
gtggcaccagaactgcgtacagcccgactgggtctcatttctgcctcgtctgagttagat
agcgttgagtctgaccgcgacttcagcctccacttcaacaggtttaaccccagcggagag
gaggaagactctgtggtccacgagtaa
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integrated database retrieval system
