Polyodon spathula (Mississippi paddlefish): 121317178
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Entry
121317178 CDS
T07273
Name
(RefSeq) serologically defined colon cancer antigen 8 homolog
KO
K16488
serologically defined colon cancer antigen 8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121317178
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121317178
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121317178
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121317178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCCAP
Motif
Other DBs
NCBI-GeneID:
121317178
NCBI-ProteinID:
XP_041108773
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All DBs
Position
6:39926168..40048119
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AA seq
710 aa
AA seq
DB search
MTQLRSVLEEQPSAEAALSPKKRAGMAPRSPQATGGWGEGDLEMTWQELQHSHAVNQLRS
LLRQQEKESAPSTPTSRRKTSHKRPSEKGNADLPAIQDLVPIINSQSEYIQHLEEEVKFC
KEELFGMKQRISVVILENDKLHEELKLKNVEDTLKDYTILEASTNVPESCFVGGTGPGAP
DPKQHSHRQQPQQQQQVQPPLAPAQPLPSNDPTDALKWQMELEKLKLLYQAKTETLEAQM
MSLRKDLAVSQTDCEEMKGRLRHQESVADMSSGNRVGGLCLKCAQHEAVLAQTHTNVHMQ
AIERLTRERDELMAVLSCQRNNQGEMEQRESNAYRQVKQAVEMAEEANLEKTQALIQCEQ
LKKEMLRQKDRLEMELAAEQEKITKAKETAREEMKKEKEELAASVMSLSVKVASLEGQLE
RLSREKNSVANQLEEAQRQLTSQELDISEVCGELRYQLNQSQLKRDEAEKELREFRTKTT
RDLELREQEIEKLRLELSETKQRLERAQQDSACAKDESLRLTELLGRSEHQLHLTRLEKE
TAVRCRSDEVKALTFQAQHREQELIQKMQQMEAQHENSVNELEALLNSQNTLIGKLKDEC
RILGTKLERVTEKNRSEIGQLSQENMYLRDTLEKLQSRSDKMEEQCIQHGRMHERMKQRL
GQLDQHCQSSAQHVMELLNKQNQLLKERHALIEEMQHLRIQFPNLSRIES
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgacacagctgaggagtgtgttagaagagcagccctccgctgaagctgctctttctcca
aagaagagggctggaatggctcctagaagtcctcaggctacaggggggtggggagagggg
gacttggaaatgacctggcaagaactacagcacagccatgcagtcaatcagctaagatca
ttactccgtcaacaagaaaaggagtctgcacccagtacacctacaagtagaagaaaaaca
tcacacaagaggccttcagaaaaaggaaatgctgatttgccagctattcaagatcttgtc
cctattattaacagtcagtctgaatacattcagcatctagaggaggaggtcaagttttgc
aaggaagagctatttgggatgaaacaacgcattagtgtagtgattcttgaaaatgacaaa
ctgcatgaagaattgaagttgaagaatgttgaggacactttgaaagactatactatcttg
gaagcctcgacaaatgtcccggaatcctgttttgttggaggaactggccccggagctccg
gatcccaaacagcactctcacaggcagcagccgcagcagcagcagcaggttcagccccca
ttagctcctgcacagcctctaccatccaatgatccgacagatgctctgaaatggcaaatg
gaactggagaaattaaaactactctatcaagcaaaaacggaaacgttagaagcgcagatg
atgtcattgagaaaagatttggcagtttcacagactgactgtgaagaaatgaaaggacga
ctaaggcatcaggagtcagtggcagacatgtccagtgggaaccgtgtcggtggcttgtgt
ttgaagtgtgcccaacatgaagctgttttggcacagacccatacaaatgtacatatgcaa
gcaatagaaagattaacaagagaaagagatgaactgatggccgtattatcctgccagagg
aacaatcagggtgaaatggagcaaagagaatccaatgcatatcggcaggtcaaacaggct
gtggagatggcagaagaagccaacctggaaaaaacacaggcattgatccaatgtgagcag
ttaaaaaaagagatgctgaggcaaaaagatcgacttgaaatggaattggctgctgaacaa
gagaagattaccaaagccaaggagactgcacgagaggaaatgaagaaggaaaaagaagag
ttagcggcatctgtgatgtcactctccgtaaaggtggccagtctcgaaggccagctcgag
aggttatccagagaaaagaattcagtagccaatcagctggaggaagctcaaaggcagctc
acttctcaggagttggatatcagtgaggtgtgtggagagctgcggtatcagttaaaccaa
tctcaattgaagagggatgaggcagagaaagagctccgggaattcagaactaaaaccacg
agggatcttgaactccgagaacaggaaatagagaagctgcgtttggagctgagcgaaacc
aagcagcgtctggaacgtgctcagcaggactcggcctgcgccaaggatgagtccctgaga
ctgacagagctgctgggcagatctgagcaccaactgcacctcaccaggctggagaaagag
actgctgtccgctgccgcagtgacgaagtgaaggccttgaccttccaggcccaacaccgt
gagcaagagctgatacagaagatgcagcaaatggaggctcagcatgagaacagcgttaac
gaactggaagccttgttaaattcccaaaatactttgataggcaaactgaaggatgagtgc
cgaatcctgggtacaaagctagaacgtgtgacagagaagaacaggtcagaaattggccag
ctttcccaggagaacatgtaccttcgggatactctggagaaacttcagtctcgtagtgac
aagatggaagagcagtgtattcagcatgggcggatgcacgagagaatgaaacaaagacta
gggcagctagatcagcattgccagtcgagcgctcagcacgtgatggaattgctgaacaag
cagaaccagctgctgaaggagaggcacgctctgattgaggagatgcagcacctgaggata
cagtttcctaatttatcaagaattgaaagctga
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