Polyodon spathula (Mississippi paddlefish): 121317215
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Entry
121317215 CDS
T07273
Name
(RefSeq) vitrin-like isoform X1
KO
K24506
vitrin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121317215
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
121317215
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GFIT
Motif
Pfam:
VWA
VWA_2
LCCL
DUF1194
VWA_CoxE
Rxt3
Motif
Other DBs
NCBI-GeneID:
121317215
NCBI-ProteinID:
XP_041108834
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Position
6:complement(43575284..43615826)
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AA seq
700 aa
AA seq
DB search
MNRSTLATITFALFVVCADGAKENGKNNKKPKQIVPSINCDTRAGKISIPEFMARCPAGC
QETKQPVYGTDVYASISSVCNAALHSGVMTNAGGKILVNKVAGQASYRGSFSNGIRSMSL
PKWRESFIVSAGKAKKGVTYPSILEFLTSRSEVVRTAGQKDVKASPATTTHQTTTTPEPT
TATPEPTTTSPKPMTITTIQPPTTTSITTVKPRAATHKIREAGSNHPLYASLIAAASSRQ
AQNAQGKGPTPDISAVVPDTGYTWTEVGSDDTPETVDAWKPEAKPFDTGFGVKEQDSVPK
FQEPVSQGDPNCKVDIVFLMDGSWSIGKRRFNIQKEFLADISQALDVGMAGPMLGIIQFG
NDPVTEFNLKAYSSSRDLKPVIEKIVQKGGLSNVGKALSYTNKHFFTDASGNRGGPPNVA
VVLVDGWPTDKVEEASRLARESGINIFFVIIEGPDNNEKQNVVETNFVDKAVCRTNGFFS
MNVPSWFALRKAVQPLVKRVCDTDRLVCSKTCLNAADIAFVIDGSSSVGTGNFRTVLQFV
ANLTKEFEISDTDTRVGAVQYTYEQRLEFAFSQHNSKPELLNAIKRINYWSGGTSTGAAI
TYASEQLFSKSKPSKRKIMIVITDGRSYDDVRAPALAVHRNGVIAYSIGIAWAAQEELEY
IATDPDKEHSFFVDEFDSLYKFVPKIIHNICQEFNSQPRN
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggtcaactcttgcaaccattacgtttgctttattcgtagtctgtgctgatgga
gcaaaagaaaatggcaaaaataacaaaaagccaaaacagattgtaccgtctataaattgt
gatacccgggcagggaagatcagtattccagaattcatggcgaggtgtcctgcaggctgt
caggagacgaaacagcctgtatatggcacggatgtctatgcctccatttccagtgtgtgt
aacgctgcgcttcacagtggtgtaatgactaatgctggaggtaagatccttgtgaacaag
gtcgctggacaggcctcttacagaggcagtttctccaatggcatccgatccatgtctctt
cctaagtggcgagaatcattcatcgtgtctgctggtaaagcaaagaaaggagtgacctac
ccatcaatccttgaatttctaacttcaaggtctgaagttgtaagaacagcaggacaaaaa
gatgtcaaggcctctccagcaacaactacccatcaaaccacaacgactccagagccaacg
actgcaacacctgaacccacaaccacctctcccaaaccaatgaccatcaccaccattcag
ccacctaccaccacatctatcaccacagtcaaaccccgtgcagccacacacaaaatcaga
gaagcaggtagcaatcacccactctatgcctctctaatcgcagctgcaagttcaaggcag
gcccagaatgcacaaggaaaggggccaacaccagatattagtgctgttgtaccagatact
ggctatacctggactgaagtaggaagtgatgataccccagagactgtcgatgcctggaaa
cctgaagcaaagccctttgacacaggctttggtgtcaaagaacaggattcggtccccaaa
tttcaagaacccgtttctcagggagatccaaattgcaaagtagacattgtgttcctaatg
gacgggagctggagcataggaaagcgtcgctttaatatccaaaaagaattcctggctgat
atttcccaagcccttgatgttggaatggctggtcctatgctgggcattattcaatttggc
aatgatccagttacagaattcaacctgaaggcctactccagttccagagacctgaagcct
gtaatagagaagatcgtccagaaggggggactctccaatgtcggaaaggccttgtcctac
accaacaaacacttcttcactgatgccagtggcaatcgagggggccctcccaatgttgcc
gtggtgctggtggatggctggcccactgacaaggtggaggaggcctcgcgtctggccagg
gaatcaggaatcaacatcttttttgtcatcattgaaggcccagacaacaacgagaagcaa
aatgttgtggagacaaacttcgtagacaaggctgtttgcaggacaaatggtttcttctct
atgaacgtgcccagctggttcgcgctgcgcaaggcggttcagcccctggtgaagcgggtc
tgtgatacagaccggctcgtatgcagcaagacctgcctcaatgcagctgacatcgccttc
gtcattgacggctccagcagtgtgggcacgggcaacttccgtactgtgctgcagtttgtg
gccaacctcaccaaggagtttgaaatctcagatacagacacgcgtgtgggtgctgtgcag
tacacatatgagcagcggctggagtttgccttcagccagcacaacagcaaaccagaattg
ctcaatgccatcaagcgcattaactactggagtggaggcaccagcacaggggcagcaatc
acctacgcatcggagcagctcttcagcaaatccaagcccagcaagcgcaagatcatgatc
gtcatcacagatggacgttcctatgacgacgtccgggcaccagcactggccgttcatcgc
aacggtgtgatcgcatactcgattggcattgcctgggctgcccaggaggagctggagtac
attgctactgaccctgataaagaacattccttcttcgtggatgagtttgacagcctctac
aaatttgtgcccaaaatcatacacaacatctgtcaggaattcaattcacagccacgtaac
tga
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