Polyodon spathula (Mississippi paddlefish): 121317267
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Entry
121317267 CDS
T07273
Name
(RefSeq) exportin-1-like
KO
K14290
exportin-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03008
Ribosome biogenesis in eukaryotes
pspa03013
Nucleocytoplasmic transport
pspa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121317267
03008 Ribosome biogenesis in eukaryotes
121317267
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121317267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121317267
03009 Ribosome biogenesis [BR:
pspa03009
]
121317267
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121317267
03036 Chromosome and associated proteins [BR:
pspa03036
]
121317267
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121317267
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121317267
Pre-60S particles
121317267
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121317267
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121317267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
Hydrolase_3
BspA_v
Motif
Other DBs
NCBI-GeneID:
121317267
NCBI-ProteinID:
XP_041108945
LinkDB
All DBs
Position
6:48083606..48117413
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAARQLLDFSQKLDINLLDSVVNCLYHGEGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDATSV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLVEKRLNLRETLMEALHYMLLVSEV
EEREIFKICLEYWNHLAAELYRESPFSTSTSPILSGSQHFDVPPRRQLYLPVLSKGRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLSGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEESAAQSFYQTYFCEILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKINA
ALNPANPVNNQMFIQEYVANLLKSAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTTDLFLEERESSLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagcagaccatgcagctcgtcagctgctggacttcagc
cagaaactggatatcaacctactggacagtgtggtgaattgtttgtaccatggtgaaggt
ccacagcaaagaatggcacaggaggtgttgacccatttgaaagaacacccagatgcttgg
acaagagttgacaccattttggagttttcgcagaatatgaacactaaatactatgcactg
caaatcttggaaacggttataaaaacaagatggaagattcttcccagaaatcagtgtgaa
ggaataaaaaaatacgttgttggtttgattatcaaaacgtcatcggacgcaacaagtgtg
gagaaagagaaggtttacattgggaaactgaacatgattctggttcagatactgaaacag
gagtggcccaaacactggccaacatttataagtgacattgtgggagccagtaggaccagt
gaaagcctctgccagaacaacatgatcattctcaagctgctgagtgaggaggtgttcgat
ttctccagtggacagatgacccaggtgaaagcaaagcatttaaaagacagcatgtgcaat
gagttttcacagatattccagctctgtcagtttgtcatggaaaactctcagaatgcccct
cttgtccatgcaaccttggagacattactcagattcttaaactggattccgcttggatat
atatttgagacaaaactgatcagcacacttgtatacaagtttttaaacgtcccaatgttt
cgaaatgtgacccttaagtgtctgacggaaattgctggtgtcagtgtcagtcaatatgag
gagcagtttgttactctctttacactgacaatgatgcagttgaaacagatgcttccttta
aacaccaatatcagattggcttattcaaatggaaaagatgatgagcagaatttcattcag
aaccttagcttgtttctctgtacgtttttaaaagaacatgggcaactcgtagaaaagagg
ctgaacctaagggaaactctgatggaggctcttcattacatgttgttggtatccgaagtt
gaagaaagggagatttttaagatttgtctcgagtactggaaccatttggcagctgaactc
tatcgagaaagtccgttttcaacatcgacatctccaatattgtctggaagtcaacacttc
gatgtccctcctcggaggcagctgtatttgccggtgttgtcaaaaggtcgtctactaatg
gtcagccgaatggctaaaccagaggaagtgctggttgtggaaaatgaccaaggagaagtt
gtaagggaatttatgaaggacacagattccatcaacttgtataaaaacatgagggagacg
cttgtgtaccttacacatttagactatgcagacacagaacgtattatgacagagaaactt
cacaatcaagtaaatggtacagagtggtcttggaaaaacctgaatacactttgctgggct
attggttcaatcagtggagcgatgcatgaagaagatgaaaagaggttcttggtaacagtt
attaaggatctccttggcctatgtgaacaaaagaggggaaaggacaacaaagctattatt
gcatcaaacataatgtacattgtggggcagtatcccagatttctcagagcccactggaaa
tttttgaagactgtggtcaacaagctgtttgaattcatgcatgaaacccatgatggtgta
caggatatggcatgtgacacatttattaaaatagcccagaaatgccgtaggcactttgtt
caggtgcaggtaggagaagtgatgccatttatagatgaaattctgaacaacattaacaca
ataatctgcgaccttcagccacaacaggttcatacgttctatgaagctgttggttacatg
atcggggcacagacggaccaaaccgtgcaggagcacttaatagaaaaatacatgctcctg
cctaaccaagtgtgggatagcatcattcaacaggcaaccaaaaatgtagacattctgaag
gacccagaaacagtgaagcaacttggcagtatcttgaaaacaaatgtaagagcgtgtaaa
gctgttggtcatccttttgtaattcagcttggcagaatctacctggatatgctgaatgtg
tacaagtgcctcagtgagaatatttctgcagcaattcaaacaaatggagaaatggtgacc
aaacaacctttgataagaagtatgcgaacagtaaaaagggaaacattaaaactgatttcc
ggttgggtgagccggtccaatgatcctcagatggtagcggagaactttgtgccccctctc
ttggatgcagttcttattgattatcagaggaatgtccctgcagccagggagcctgaagta
ctgagtaccatggctaccattgtgaataaattgagtggtcacatcacagctgaaattcca
cagatatttgatgccgtcttcgaatgcactttaaatatgattaacaaagactttgaggaa
tatcctgagcatcgaacacatttcttcttgctgctgcaggctgtaaattcacattgcttc
ccagcattcctggccattcctcctgcacagttcaagttggtgttggattctattatttgg
gcttttaaacacacaatgagaaatgttgctgacacaggtctgcagatactgtataccctt
ctacaaaatgtagctcaggaagagtcagctgctcagagtttctaccagacttacttctgt
gaaattctgcaacatatcttctctgttgtaacggatacctctcatactgctggtttaaca
atgcatgcttcaattcttgcatacatgtttaatttggtggaagaaggcaaaataaatgca
gcattgaatccagcaaatccagtcaacaaccagatgtttattcaagagtatgtggccaat
cttctcaagtcagccttcccacacttacaggatgcacaggtaaaagtgtttgtaactggg
ttgttcagcttgaatcaagatattcctgccttcaaagaacatctaagggactttctggta
caaattaaggagtttgctggtgaagatacaacagacctattcttggaagaaagagaatcg
tctcttcgacaagcccaggaggagaaacacaaattacaaatgtctgttcctggaatctta
aatccacatgaaattccagaagaaatgtgtgattga
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integrated database retrieval system
