Polyodon spathula (Mississippi paddlefish): 121317314
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Entry
121317314 CDS
T07273
Name
(RefSeq) sorting nexin-17-like isoform X1
KO
K17929
sorting nexin-17
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121317314
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121317314
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNX17_FERM_C
SNX17-27-31_F1_FERM
SNX17-31_F2_FERM
PX
RA_2
RA
Ras_bdg_2
FERM_M
Sputnik_MCP_1st
FERM_N
Fn3-I_PB4
Motif
Other DBs
NCBI-GeneID:
121317314
NCBI-ProteinID:
XP_041109054
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All DBs
Position
6:52288045..52318340
Genome browser
AA seq
469 aa
AA seq
DB search
MHFSIPETEVRSGENGSTYVAYNIHVNGVLHCRVRYSQLLRLHEQLKKEYGNNVVPAFPP
KKLFTLAPVEVEQRREQLEKYMQAVRQDPILGASETFNSFLRKTQQETQQIPTEEVHLDV
YLSNGQKVKVNILTSDQTEDVLEAVASKLGLPDDLVGYFSLFLIREGKDEGYTFVRKLQE
FELPFVSVTSLRNPEYRIVHRKSYWDSAYDNDIMDNVVGLNLLYAQTVSDTERGWILVNK
EQHRQLKSLQEKGSKKEFIRFAQTLKYFGYMKFDPCITDFPEKGCHVIVSAGNNELNFHV
KLSNDQIKDGSFKVTRMRCWRVTSSQVPVANGMANSDTSGKSDIKLELAFEYLMSKERLQ
WVTITSPQAIMMSICLQSMVDELMVKKSGGSIKKKRHNGSLRRSDSEQAVKSPPLLDSPD
SNREPIVKLSSKLTSVTLQGISTSNPAKDISGNNIHGNYAFEGIGDDDL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttccattcccgagaccgaggttcgttccggagagaatgggtccacttatgtg
gcttacaacattcacgtaaacggagttctgcactgccgggtcagatacagccagctcctc
aggctacatgagcagttaaaaaaggagtatggtaataatgtagtcccagcattccctcca
aagaaactttttacactcgcgccagttgaagtggaacagcgaagagaacagctagagaag
tatatgcaggctgtgcgacaggaccctatacttggagccagtgaaacattcaacagcttc
ttgagaaaaacccaacaggaaacacagcagattcccacggaggaagttcacttggatgtt
tacctgtcgaatgggcagaaagtgaaagtgaacatactcacatcagaccagaccgaggat
gtcctagaggctgtagcttcgaagttaggtctacctgatgacctggttggatactttagc
cttttcctgatccgagagggaaaggatgagggctatacttttgtacgaaagctgcaagag
tttgaattgccgtttgtatcagtcaccagccttaggaacccagagtatcgaatcgtccac
cggaaaagttactgggattcagcatatgataacgacataatggataacgtggttggacta
aatttattatatgcgcagacagtttccgataccgaacgaggctggatcctggtgaataaa
gagcagcatagacagctcaaatccctgcaggagaaaggctctaaaaaagagtttatccgt
tttgctcagaccctgaagtacttcggctacatgaagtttgatccctgcatcacagacttc
ccagaaaagggctgccatgtgattgtcagtgctggcaacaatgagttgaactttcatgtc
aaactttcaaatgaccagattaaggatggaagctttaaagtgacgcgcatgcggtgctgg
cgggttacttcctcacaggtccctgtggcgaacggtatggcaaatagcgacacctctggg
aaatctgacattaaattggaactggcgtttgagtatctcatgagtaaagagcgcttgcag
tgggtcaccattaccagtccacaggcaattatgatgagcatctgtctgcagtctatggtg
gatgaactgatggtaaagaagtctggtggcagcatcaagaagaaacgtcataatggttcc
cttcgtcggtctgacagtgaacaagctgtgaaatctcctcctttattggactcccctgac
tcaaacagagagcctattgttaaactgtcgagtaagctcacttcggtaaccctgcaaggg
atcagcacttccaatcctgccaaagacatcagcggcaacaatatccatggcaactatgcc
tttgaggggattggagatgacgatttataa
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