Polyodon spathula (Mississippi paddlefish): 121317333
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Entry
121317333 CDS
T07273
Name
(RefSeq) bifunctional glutamate/proline--tRNA ligase-like isoform X1
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00860
Porphyrin metabolism
pspa00970
Aminoacyl-tRNA biosynthesis
pspa01100
Metabolic pathways
pspa01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
121317333
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121317333
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspa01007
]
121317333
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121317333
Enzymes [BR:
pspa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
121317333
6.1.1.17 glutamate---tRNA ligase
121317333
Amino acid related enzymes [BR:
pspa01007
]
Aminoacyl-tRNA synthetase
Class I (A)
121317333
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
121317333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
WHEP-TRS
tRNA-synt_2b
ProRS-C_1
HGTP_anticodon
tRNA-synt_1c_C
tRNA-synt_1c_C2
GST_C
Arc1p_N_like
GST_C_2
GST_C_3
Motif
Other DBs
NCBI-GeneID:
121317333
NCBI-ProteinID:
XP_041109088
LinkDB
All DBs
Position
6:complement(53666895..53710218)
Genome browser
AA seq
1530 aa
AA seq
DB search
MALQLTINSNNPPLVALLAAEHVKSSVSVSVEEGKETSMRVTDKVLFSDVNSIARYLARV
APALGLYGSNLLEQTEVDHWLEFSAKHLSVPAQLDSAVRELDSALCLRTFLVGNSLTLAD
LCAWAALKGNGAWQQQLSQNRAPGHVKRWYNFLGTQAAFKSVGSKWATTAVQQNGVQSSE
KKQDVGKFAELPGAEIGKVVVRFPPEASGYLHIGHAKAALLNQHYQVNFKGKLIMRFDDT
NPEKEKEDFEKVILEDLSLLQIHPDQFTYTSDHFDLILKLAEKMLHEDKAYIDNTPAEQM
KQEREQRVESHNRSNSIEKNLQMWEEMKKGSEYGQTCCMRAKIDMKSNNGCLRDPTMYRC
KNQPHPRTGNKYKVYPTYDFACPIVDSVEGVSHALRTTEYHDRDEQFYWFIEALGIRKPY
IWEYARLNLNNTLLSKRKLTWFVDQGFVEGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQG
GSKSVVNMEWDKIWAFNKKLPISCKKVIDPVAPRYTALLKDEVVPVNILAASEEYKEVAK
HPKNAEVGVKPVWYGPRVLVEGADAETFKEGETVTFINWGNIDITKIHRDASGRIVSLDG
QLNLENRDYKKTTKITWLTETPRAPLVPTMCVVYDHLITKPVLGKEDNFKDYINKNSKTE
ERMLGDPCLKDLKKGDIIQLQRRGFYICDQPYEPVSPYSCKESPCVLLFIPDGHTKEMPT
AGSKEKSKAEASKKGVSSEPHPLPLQKDHVQTQSLSHPATSTLPPAGQEDSVTLLNRITA
QGEAVRDLKAKKSPKEEIDAAVKQLLALKAEFKQKTGLDYKPGMAPPSPAPTQAAPASSS
SPSSCPYETVAQQGELVRKLKTEKAPKDQIDAAVKQLLALKAEFKQKTGLDYKPDMAPLT
QTTPTPSPAPSQSAPTSKGSPADTPEAQALFNKVAEQGEQVKKLKAEKAPKDQVDAAVKS
LLDLKAHYKTLSGVEYKPAGGEDRRKENKSEKQSKKQGGEARRGKEPTREQDKSAGSGGA
GEGQGPKKQTRLGLESKKEENLADWYSQVITKAEMIEYYDVSGCYVLRPWSFAIWETIKS
FIDAGIKKLGVENCYFPMFVSQAALEKEKSHIADFAPEVAWVTRSGKTELAEPIAVRPTS
ETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHTAFATKEEA
AEEVLQILELYAQVYEELMAIPVVRGRKTEKEKFAGGDYTTTVEAFISASGRAIQGATSH
HLGQNFSKMFDITFEDPKRPGEKQFVFQNSWGLTTRTIGVLTMVHGDNMGLVLPPRVACL
QIIIIPCGITASLPEEERDTLLQKCSQYLDRLLKIGIRAKADLRDNYSPGWKFNHWELKG
VPVRVEVGPRDMKSSQFVAVRRDTGDKLTIKEDEAENRMRDLLEEIQTNLYTRASNDLKK
HMVVADSMEQFQKEMDQGKIVQIPFCGGIECEDWIKKTTAKDQDVEPGAPSMGAKSLCIP
FKPLQELKAGQMCVSGKEPAKHYTLFGRSY
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggctttacaactcaccatcaattccaacaacccgcctttggtggcgctgcttgctgct
gagcatgtgaaatcatctgtcagcgtgtctgtggaagagggcaaagaaaccagcatgcgg
gtcaccgataaggtgctcttcagtgatgtgaactccatcgctcgctacctggctcgggtt
gccccggctctcgggctctatggctccaacctgctggagcagactgaggttgaccactgg
ctggagttcagcgcgaagcatctgtctgtcccagcccagctggactctgcagtccgggag
ctcgacagcgccctctgtctgcgaactttcctggtggggaactccctgaccctggctgac
ctctgtgcttgggcggctctcaaagggaacggagcctggcagcagcaactctctcagaac
cgggctccgggacatgtcaagcgctggtacaacttcctaggaacgcaggccgccttcaaa
tctgtgggcagcaagtgggcgaccacagcagtgcagcagaatggagtgcagtcatcagag
aaaaagcaggacgtagggaagttcgctgagctgcccggagctgagatagggaaggtggtg
gtccgatttcctccagaagccagtggctacctgcacataggccatgccaaggctgccctg
ctgaaccagcactaccaggtgaacttcaagggtaagctgatcatgcgctttgacgacacc
aaccccgaaaaggagaaggaagatttcgagaaggttatcctggaggacttgtctctgctg
caaatccaccctgaccagttcacctacacctcagaccactttgacttgatcctcaagctg
gcagagaagatgctgcacgaggacaaggcctacattgacaacacacctgccgagcagatg
aaacaggagagagagcagagggtcgagtctcacaaccgttccaactctatagagaagaac
ctgcagatgtgggaagaaatgaagaaaggcagcgagtacgggcagacctgttgcatgagg
gccaagattgacatgaaatccaacaatggctgcttgagagaccccaccatgtaccgctgc
aagaaccagccacacccacgcactggcaacaagtacaaggtgtaccccacatacgacttc
gcctgcccgattgtggacagcgtagagggggtgtcccatgcgctgcgtaccacagagtac
cacgaccgggacgagcagttctactggttcatcgaggctctgggaatccgcaaaccctac
atctgggaatacgccagactcaacctcaacaacactctgctctccaagaggaagctcaca
tggtttgtggaccagggcttcgtggaaggctgggatgatcctcgattccccactgtcaga
ggggtactccggaggggcatgactgtcgaggggctcaagcagttcatcgctgcccaaggt
ggttccaagtctgttgtcaacatggagtgggacaagatctgggctttcaataagaagctg
ccaattagctgtaaaaaggtgattgacccagtggcaccccgatacacggctctgctgaaa
gatgaggtcgtcccagtcaacatcctcgcagccagcgaggagtacaaagaggtggccaag
caccccaagaacgcagaggtgggagtgaagccggtgtggtacgggcctcgcgtcctggtg
gagggggccgatgcagagaccttcaaagagggagagaccgttaccttcatcaactggggc
aacattgacatcaccaagatacacagagatgcgagcgggcgcattgtgtccctggacggt
cagctgaatctggagaaccgtgactacaagaaaaccaccaagatcacctggctgacggag
accccccgagccccactggtgcccaccatgtgtgtcgtctatgatcacctcatcaccaag
cctgtgctgggcaaagaggacaacttcaaagactacatcaacaagaacagcaagacagag
gagaggatgctgggagacccatgcctaaaggatctgaagaaaggcgacatcatccagctg
cagaggaggggcttctacatctgcgaccagccctatgagccagtcagcccatacagctgc
aaggagtccccatgcgtactgctcttcatcccggacggacacaccaaggagatgcccact
gctggctccaaggaaaagagcaaagcagaggccagcaagaaaggggtgagcagtgagccc
catccacttcctttacaaaaagaccacgtacagacacagtctctgagccacccagccacc
tccacactgcccccagctggccaggaggactctgtaactctgctcaaccgaatcacagcg
cagggggaggcagtccgtgacctcaaggccaagaaatctcccaaagaggagattgatgca
gccgtcaagcagctgctggctcttaaggcagagtttaaacagaagactgggctggactac
aaaccaggcatggctcctcccagccctgcccctacacaggcagcccccgcctcctcctcc
agcccctcctcatgcccctacgagacagtggctcagcagggagagctggtcaggaagctc
aagacagagaaggcacccaaggaccagatcgacgctgccgtcaagcagctgctggctctg
aaggcagagttcaaacagaagactgggctggactacaaaccagacatggcccctctcaca
cagacaacgcccactcccagccccgccccttcacagtcagcccccacctccaaagggagt
ccagccgacacccccgaagcccaggctctcttcaacaaggtagcagagcagggagagcag
gtcaagaagctaaaggcagagaaggcacccaaggaccaggtggacgctgcagtgaagtcc
cttcttgacctgaaagctcactataagactctgagcggggttgagtacaagccagctggc
ggggaggacaggaggaaagagaacaagtctgagaaacagagcaagaagcaaggaggagag
gcgcggcgaggcaaagagccgacaagggagcaggacaagagcgcagggtctgggggagca
ggggagggacagggcccgaagaaacagacacggttgggtctggagtctaagaaggaggag
aatttggcagactggtactcacaggtgatcaccaaggcagaaatgattgagtactacgac
gtcagcggctgctatgtgttgcggccctggtccttcgccatctgggagaccatcaagagc
ttcattgacgcagggatcaagaagctgggcgtggagaactgctacttccccatgtttgtt
tctcaggccgccctggagaaggagaaatcgcacattgccgactttgcacccgaggtcgcc
tgggtaactagatctgggaaaactgagctggcagaacccattgctgtccgtcccacgagc
gaaacagtgatgtacccagcctatgccaagtgggtgcagtcccacagagatctgccaata
aaattgaaccaatggtgtaacgtggtgcggtgggagttcaagcacccccagccgttcctg
cgcacccgggagttcctgtggcaggaggggcacaccgccttcgccacaaaagaggaggct
gctgaggaggtgcttcagatcctggagctgtacgcgcaggtgtatgaggagctgatggcc
attccggtggtgaggggccggaagactgagaaggaaaagtttgctgggggagattacact
accaccgtggaggctttcatctctgccagtggcagagccatccagggcgccacctcacac
cacctgggtcagaacttctccaagatgtttgacatcacgtttgaggatccgaagcggccg
ggagagaagcagtttgtcttccagaactcgtggggtctgactacccgcaccattggggtg
ctcaccatggtgcacggggacaacatggggctggtgctgccacccagggtggcctgtctg
cagatcattatcattccctgtggaatcactgcctccctccccgaggaggaacgagacaca
ctcctccaaaaatgctcccagtatctggacagactcctgaagatcgggatccgtgccaag
gctgacctcagagacaactactctcccggctggaagttcaatcactgggagctcaagggt
gtcccggtgcgtgtggaggtaggacctcgtgatatgaagagcagtcagtttgtggcggtg
cgcagagacacaggagacaagctaaccatcaaagaggatgaggcagagaacaggatgaga
gacctgctggaggagattcagaccaacctgtacacgagggcttccaatgacttgaagaaa
cacatggttgttgccgactcgatggagcagtttcagaaagaaatggaccagggcaagatt
gtgcagattccattctgcggtgggattgagtgtgaggattggatcaaaaagaccactgca
aaggaccaggatgtggagcctggagcgccctctatgggagccaagagtctctgcatcccc
ttcaaacccctgcaggagctgaaggctggacagatgtgtgtgagcggcaaggagcctgcc
aagcactacacactgttcggacgcagctactga
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integrated database retrieval system
