Polyodon spathula (Mississippi paddlefish): 121317341
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Entry
121317341 CDS
T07273
Name
(RefSeq) STAGA complex 65 subunit gamma-like
KO
K11316
STAGA complex 65 subunit gamma
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121317341
03036 Chromosome and associated proteins [BR:
pspa03036
]
121317341
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
121317341
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
121317341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
121317341
NCBI-ProteinID:
XP_041109106
LinkDB
All DBs
Position
6:complement(54773752..54784596)
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AA seq
412 aa
AA seq
DB search
MMRYWGEIPVSAVPPSRSSFDLLQREFRSVEVQDPPMHQPSAHRPRPTTMFDVPSEPCSL
TIHTVQLSQHVRRLRALLAAAQGQPQAEGGARLEENETLPARPPTPAIPDDLLPLDSKAP
HLPFQLLHSDPESDFYKGKGEPVTELSWPSCRQLLYQSVATVLAHAGFESAPESVLEMLT
DVAHEHYLRLSRLLRVAVDREARQGSTPFPDVVEQVFHEAGIGSVLALQHFWQHRIKDYH
SYMLQVSKQLSEEYERLVNPEKAAEDAKPLKIKEEPLSDITFPINEELEADLASGDQSLP
IGVLGAPSERFSTGLEGDSSPHTGAVGNSSPLWNLAHVKIEPQDAEEGQVQGHGVLGGDV
FEEPMSTMSESGIPPSPEGAGSDASYASHSPDSLMGTSPVFNQRPKKRLKKM
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggtactggggtgagatccctgtgtcggctgtaccacccagccggagctccttt
gacctgctgcagagggagttccgctcagtagaggtgcaggacccaccgatgcaccagcct
tccgcccatcgcccgcggcccaccacaatgttcgatgtgccctccgagccttgtagcctg
accatacacactgtgcagctcagccagcatgtgcgccggctccgagcactgcttgccgct
gcgcaggggcaaccccaggctgaggggggtgctaggctggaggagaacgagaccttgcct
gctcggcccccaacaccagccatcccagatgacctgctacccctcgacagcaaggcaccc
cacctccccttccagcttctacacagcgacccagaaagtgacttctacaagggaaaaggg
gagcctgtgacggagctgagctggccctcttgtcggcagctcctgtatcagtcagtggcc
acagtcctggctcacgcaggctttgagtcggcaccggagagcgtgctggagatgctgacg
gatgtggctcatgagcactaccttcggctgagtcggctgctacgcgtggctgtggaccga
gaggcccgccagggctccacgcctttccctgacgtggtggagcaggtgttccacgaggct
ggcatcggcagcgtgctggcactgcagcacttctggcagcaccgcatcaaggactaccac
agctacatgctgcaggtaagcaagcagctgtctgaggaatacgagcggctagtgaaccca
gagaaggcagcggaggatgccaagcccctgaagatcaaggaggagcctctcagcgacatc
accttcccgatcaacgaggagctggaggcagacctggcttcgggtgaccagtccctgccc
attggggtgctcggagctcccagtgagaggttttccaccgggcttgagggagacagctcc
ccccatacaggtgcagtgggcaacagttcccccttgtggaacctagcacatgtgaagata
gagccacaggacgcagaggaggggcaggtgcaagggcacggcgtgctggggggcgatgtc
ttcgaggagcccatgtcaaccatgagcgagtccggcatcccgccctcccccgaaggggct
ggctctgacgccagctacgcctctcactcccccgatagcctcatgggcacctcgcccgtc
ttcaaccagcgccctaagaagcgcctcaagaagatgtga
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