Polyodon spathula (Mississippi paddlefish): 121317354
Help
Entry
121317354 CDS
T07273
Name
(RefSeq) transcriptional-regulating factor 1-like isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121317354
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
121317354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2
zf-C2H2_4
Myb_DNA-binding
zf-C2H2_jaz
zf-met
zf-C2H2_2
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
121317354
NCBI-ProteinID:
XP_041109128
LinkDB
All DBs
Position
6:complement(55563676..55643688)
Genome browser
AA seq
1170 aa
AA seq
DB search
MGDHTLYKPNHSGNSTDDGYYQQQPNPMATMSGGLNYGSSSLEPPQSSPVSPHFPHDLRD
SSAGAAMPVSAKGFPGMTEASKGTGPWTGSGNHHQSSLGNSNLMWGSSSPGEATDPGSVG
GYQYSCTAQTAADGQPKVTSSVLQKLDSFTQVFANQNLRIHQGSTGGNGHSLVQHGQSAS
PSSLADVTADRALRQLLSQKPHLHEQTQETPVQQQQRYQLEQQQMQRSFDAAQPKSQQIT
DMQQQQLYYEYQQQQLQQQRVAQMQHLQALQQRQQMQSLQSQQQMLQQQQAQYYLQQQQK
PQQQTAEAFLQQLQQQRSTYYHKQAQAAMHQLQLQQQQQQMQPLASSSPYHHNRKTVQQQ
LQYAHQEQAHPVQHIQLSSGDPYYYQEQQSASTQQQYHRQGYQQSIHVQQQVQAQEEHDL
QSPSKQYLLEPGCQPQNPGVPAAAAVSGLPEGRDDGLACSEVLPNMGVPSPPHQLGQRCL
SEALSTMQLASRKGGPQKQQLPSTLWPQVSLTTERRDPTSPDHSILNNAGFPERVEVKNR
LVCSMCQKEFKSLPALNGHMRSHGGTRTAPSLKQDEGDKQLPKEVDPLLPIVMPVSVPVK
LPLAIRPATDLSPAPCCPPDRDMPVLVRMAKSPPPASLQLLQQQPPHSPGAAHLASSKPV
HKTQKMEKAESVNVEHGQSDKKKYRHRPDPIIIPPPSFSLVLGGAILFQSQLRSPRILGE
IPPYTPPPMLSPVRHAPGLFSSVLHTGMPPITPTPRVLLGRASSADGSNVPVTPGPGEQA
VNIEPRINIGPRFQAQIPELQSRSAVEGDQHKASMVWTPRAELQSPGAQQRVEDFINMAC
SSVVPGGGTNSEYALHCLFENRGDFMATVEKLLLFKTMRPKSHPLADYHYAGSDKWAPLE
KKQFNKALATHNKDFFLVQKTVKTKTVAQCVEYYYTWKKKLHLGKRHRTRQADIKDEDIQ
SGEGEEVESDELEEDRKSDEEEEPEAHKSADLLGKTSLEPEAYQGSVPLNTCFVCEMPNC
GATFSSMQALNGHGRIHGGTNQASKPSPRGKPKAMSQSGYGSVKSSPAHSTTSGETDPTL
IFPCKECGKVFFKIKSRNAHMKTHRQQEEQERKKKQQQQECAQVITGPIMLPLDHTCLIK
QHGAQSEELHANLLPAEDMEDFLLDCEEGL
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccatacactttacaagcccaatcactcagggaacagcacggacgatggctat
taccagcagcagccaaatcccatggctactatgagtggaggcttgaactacgggtcgtcc
agcttggagccacctcagtcttctccagtgtcccctcatttccctcatgacctccgggac
agttctgctggggcggccatgccagtgtcggccaagggcttccccgggatgacggaggcc
tccaaagggactgggccttggaccggctctggtaaccaccatcagagcagcctgggcaac
tccaacctcatgtggggttcgtccagccccggggaggctacagacccaggcagtgtcggt
ggctaccagtatagctgcacagcccagacagctgcagatgggcagcctaaagtcacgagc
agtgtgttgcagaagctggattccttcacccaggtttttgccaaccagaacctgcggatc
caccaaggcagcactggtggaaacgggcacagcctggtgcaacacgggcagtcagcctcc
ccctcctctttggctgacgtcactgcagacagagccctgcggcagctcctctcccagaaa
ccccacctacacgagcagacacaggagacacctgtgcagcagcagcaaaggtaccagctg
gagcaacagcagatgcagaggtcctttgacgcagcacagcccaagtcgcaacagataact
gatatgcaacaacagcagctctattatgagtaccaacaacaacagctgcagcaacaacgg
gtggcacaaatgcagcacttgcaggcattgcaacaacggcagcagatgcaaagcctgcag
tcccagcagcagatgctacagcagcagcaagcacagtactacctgcagcaacagcagaaa
ccccagcaacagactgctgaagcattcctgcagcaattgcagcagcaacggagcacttat
taccataagcaagcacaagcagccatgcatcagttgcaactacaacaacagcaacagcaa
atgcaaccgctggcttcctcatcaccctaccaccacaaccggaaaactgtacagcagcag
ctccagtacgctcaccaggagcaagcccaccctgtccaacacatccagctctcctctggg
gacccctattactatcaggagcagcagtcggcatcaactcagcagcagtatcatcggcag
ggataccaacagagcatccatgtgcagcagcaggtacaggcccaggaagaacatgacctg
cagtctccatccaagcagtacctccttgagcccggctgccagcctcagaacccaggcgtc
cctgctgccgctgctgtctctgggctcccagagggcagagacgatggcctggcctgcagt
gaggtcctacccaacatgggagtccccagccccccacaccagctgggacagaggtgtctc
agtgaggcactgtctaccatgcagttggcgagcaggaaaggagggccacagaagcagcag
ttacccagtacactgtggccacaggtgtcattaacaactgagaggcgagatcccacctct
cctgaccacagcatcctcaataatgcaggcttcccggagagagtggaggtgaaaaacagg
ctggtgtgctccatgtgtcagaaggagttcaagagtctacctgccctcaacggccacatg
aggtcacacgggggtacgaggaccgcacccagcctcaagcaggatgaaggggacaagcag
ctgcccaaagaggtggaccccctcctgcccatcgtcatgcctgtctctgtacctgtaaag
cttccccttgccatacggcccgccacggacctctcgcccgctccctgctgcccccccgac
agagacatgcctgtgctggtgaggatggccaagtctccgcctccagcttccctgcagctt
ctgcagcagcagccgccacactcacccggagcggcccaccttgcctcctcaaagcctgtc
cacaagactcagaagatggagaaggcagaaagcgtcaatgtggagcatggccagtcagat
aagaagaagtaccggcaccgtccggacccgatcatcatccccccgccctccttcagcctt
gttctggggggcgccatcctgttccagagccagctacgctccccacggatcctgggggag
attcccccctacacacccccgcccatgctgagccccgtgcgacatgctcctggcctcttc
agcagcgtcctccacacaggcatgccccccataacacccaccccccgggtgctgctcggc
agagccagtagcgctgatggaagcaatgtcccagtgacacccgggccaggagagcaggct
gtcaacattgaaccgcgtatcaacattggcccccggttccaggctcagattcctgagctg
cagagccgttcggcagtggagggagatcaacacaaggccagtatggtgtggacaccaaga
gcagagctgcagagccccggcgctcagcagagagtggaagacttcatcaacatggcctgt
tccagtgtggttccagggggagggaccaactctgaatacgccttgcactgccttttcgag
aacagaggagatttcatggctactgtggaaaaattgctactgtttaagaccatgaggcca
aaatctcaccctttggctgattaccactatgctggctctgataaatgggcccctttggag
aagaagcagttcaacaaagccttagcgacacacaacaaagacttcttccttgtacaaaaa
acagtgaagactaagacagtagctcagtgtgtggagtactattacacatggaagaagaag
ctccatctggggaaaagacaccggacccgccaggcagacattaaagacgaagacattcag
agtggcgagggtgaggaggtggaatcagatgagctggaagaggacaggaagtctgatgaa
gaggaggagcctgaggctcacaagtctgcagacctgctgggcaaaacctccctcgagcca
gaagcctaccagggctcagttccgctcaacacctgttttgtgtgtgaaatgccaaattgt
ggagctactttcagctccatgcaggcactgaatggccacggccgtatccatggcggcaca
aaccaggcgtcaaaaccgtccccgagaggcaaacccaaagccatgtcccagtctggctac
ggctctgtgaagagctccccagctcacagcaccaccagtggagaaaccgaccccaccctg
atcttcccctgtaaggagtgtggaaaggtgttcttcaagattaagagtcgcaacgcccac
atgaagacacaccggcagcaggaggagcaggagcgcaagaagaagcaacagcagcaggag
tgcgcccaggtgatcaccggacctatcatgctgcccctggaccacacgtgtctgatcaaa
cagcacggggcccagagtgaggagctacatgcaaacctcctgccagcggaggacatggaa
gacttcctactggactgcgaagaggggctgtga
DBGET
integrated database retrieval system
