Polyodon spathula (Mississippi paddlefish): 121317356
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Entry
121317356 CDS
T07273
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2-like
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121317356
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121317356
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121317356
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121317356
NCBI-ProteinID:
XP_041109138
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Position
6:complement(55718607..55729482)
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AA seq
532 aa
AA seq
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MENVLPRLFSKRNTIFCCFILCTSISCQERTHSHAEENLFKDLFVGYNRWPRPVRNISDV
VIVKFGLSIAQLIDVNEKNQMMTTNVWLKQEWNDYKLRWNPADYDNVTSIRVPSEMIWVP
DIVLYNNADGEFAVTHMTKAHLFYTGLVQWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGS
WTYDKAKIDLERIEMNVDLKDYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRR
LPLFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSL
VIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPSTHKMPKWVCTVFLDFIPRWLFMKRP
APDKKDHHFLQQHQHSQSGEFKLSTSKYWLETDVDYKHEDTELGLSSFSPAPTAPARQPA
GVLSPHHLTLHHRLDRTTRHLGGRVNPTQRPVKIDNLVSDSSFPLSPSILRALEGVHYIA
DHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTIGLFLPPWLAGMI
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgttttaccaaggctgttctctaagaggaacacgattttctgctgtttcatt
ttatgtacgtcaatttcttgccaggagaggacccactcccatgctgaagaaaatctcttc
aaggatctctttgtcggctataacagatggcccaggccagtccgtaacatttctgatgtc
gtaattgtcaagttcgggctctccattgcacagcttatagacgtgaatgagaagaatcag
atgatgacaaccaatgtttggctcaaacaggagtggaacgactacaagctgcgatggaat
cctgcagattatgacaacgtcacatcgattcgggtcccatctgaaatgatctgggtgcca
gacatcgtactgtataacaatgcagacggggagtttgcggtgactcacatgacgaaggct
cacctgttctacactggcttagtgcagtgggtgccgccagccatctacaagagctcgtgc
agcatcgacgtgacatttttccccttcgaccagcagaactgcaagatgaagtttggttcg
tggacctatgacaaggccaagattgacctggagcgcatagagatgaacgtggacctgaag
gactactgggagagcggagagtgggccatcatcaatgctgtgggtacctacaacaccaag
aagtacgactgctgccacgagatctacccagacatcacctacttcttcataatccgccgc
ctcccactcttttacaccatcaacctcatcatcccctgcctcctcatctcctgcctgact
gttctggtcttctacctcccctctgactgcggtgagaaaatcaccctgtgcatctctgtg
ctgctctccctcactgtcttcctcctcctcatcaccgagatcatcccttccacctccctg
gtcatccctctgatcggggagtacctgctcttcaccatgatctttgtcaccctctccatc
gtcatcaccgtgtttgtgctcaatgtccaccaccgctctcccagcacccataagatgccc
aaatgggtgtgcaccgtcttcctggacttcatcccccgctggctcttcatgaagcgcccg
gccccggacaagaaggaccaccacttcctgcagcagcaccagcacagccagtcaggtgag
ttcaagctcagcacctccaaatactggctggagactgacgtggactacaagcatgaagac
accgagctgggcttgtcctccttctccccagctcctactgcccctgcccgccagcccgca
ggcgtcctctctccccaccacctcacccttcaccaccgactggacaggaccactcgccac
ctggggggcagagtgaaccccacccagcgccccgtcaagatagacaacctggtgtcggac
tcgagcttccccttgtcgcccagcatccttcgagctctggagggtgtgcattatatcgca
gaccacctgcgtgcagaggacgccgacttctcggtgaaggaggactggaaatatgtagcc
atggtgatcgaccgtatattcctctggatgtttattatcgtgtgtttgctggggaccatc
ggactcttccttcctccgtggttggctgggatgatttag
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