Polyodon spathula (Mississippi paddlefish): 121317382
Help
Entry
121317382 CDS
T07273
Name
(RefSeq) protein dopey-1-like isoform X1
KO
K26680
protein dopey
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121317382
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Others
Others
121317382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_DOP1
Dopey_N
DOP1_C
TPR_DOP1_M
PH_RBD
DUF3886
Motif
Other DBs
NCBI-GeneID:
121317382
NCBI-ProteinID:
XP_041109188
LinkDB
All DBs
Position
6:complement(57275425..57316499)
Genome browser
AA seq
2471 aa
AA seq
DB search
MNTEELELLADSKYRNYVAAVDKALKNFEYSSEWADLISALGKLNKVLHNNAKYQVVPKK
LTIGKRLAQCLHPALPSGVHRKALETYEIIFKIIGPKRLAKDLFLYSSGLFPLLTNAAMS
VKPALLCLYEVYYLPLGKTLKPGLQGLLTGVLPGLEEGSEYYDRTNALLEKVAAAVEQSA
FYSALWGSILTSPAVRLPGVTFVLFHLNRKLCMEDQLYIIGSDIELMVEAVSTSVQDSSV
LVQRSTLDLILFCFPFHMSQATRTDMIRILSAALHVVLRRDMSLNRRLYAWLLGFDNNCV
KIGPRSTRHSNPEEHATYYFNTFSKDMLVQAMVGILQGKAVGGEEESVLMHDLKPFRILI
SLLDKPELGPAILEDVLIEVFRTLHSQCKAELDLQTQSPFCKDHTQLSSKLRENKKTAEL
IKTANLLFNSFEPYYMWDYIARWFEECCRRTLNARLQAGPGGISEASELSLVEFCQLVDF
LLDIVSLPTRSMRVICQETYIEIQTEHLPQLLLRMVSALTSHLQALGLAELTDCLRLCSK
ILSKVQPPLVSPEAEGSLPFTAGQPSSAREKEEKKSIPVCLENASEVFEDSENPPSSRSS
ESGFTEFVQYQANKSEDLNRAPGEGHGMPDAQPVGSTSSETETASTVGSEDTVVHPSPTM
GHPSSSHSGKTKQKTVMQCCLEYFQQFLTRLIALYITPCTATTPAFTSEFGSVLKGDRPG
TWGMALSDAASTRSAQRECVGAFTATCQLFLECSSFPVYIAEGNLKPSPQAEESTQDSEQ
VKPPLWLQTLMDACCLASEFSIQAVAISLVMDLVGLTQSVTIVTEENVNSLETAQPMSPS
QGRVAVVIRPPLTQGILRFIAEKTAFFKHVALTLWDQLGEGTPQHHQRSVELFYQLHNLV
PSSSICEDVISQQLMHRDKKIRLEAHVKFSVLWHLTRDLNINKSSPFNRTFDRSLFIMLE
SLSSWDGSTCSVGQAWLKQVLQRHDIARVLEPLLLLLLHPKTHRVSVQRVKAERHWSRAR
NHPAEEEAGDGGGSNYMKEISYANGFSQMPVENLKVGALKECTRKALSLDEMEPFSLTVN
PFSDSLSLLSTSSENIQLAFDLPDQQMEILQSSESVGSHSSTGDSTSLEEPDYSNAAGTP
ENAPSVLIEDSVEAVIQQVVFELVDRVAQRLEEGPESREEWHLEVSDSFKLEASLCPQPL
DYLFEMSKNKNAAVKEKGPESDSNGTPDFLSVSSETIDEGTHDSIARHSSSPSIIMNLEA
TPTEPSLPLPEQQSRKRSHSSVQLSLKGKIMEKLTDKSPGAKPKVKSSKKKEEARKKAQA
EKAKQPNIFFGDSLDLENWYSCGEGEVSEIESDVGSPEVCMSASPARFNIHPLYQHLLLY
LQVYDSSRALHALSALSAMLKANPVGFVSAISTTSVNNTYTPQLSLMQNLLARHRVSVMG
KDFYSKIPVDSHSHVFRSSMFIEIIISLCLYFLRSYYPNHLAASEQDLSGNRNMQIMSIE
VLTLLFTELTKVTEASAKGFASFISDVLSKCKVQKVVLHCLLSSIFSAQKWHAERTSGKN
AAASEEGLSEDSIINFCEDEIDNCSTLQSQLLRLLQSLIILEHRVLGLSEESEASYEFVG
TDAEHINPQQPLTSLQYLPSQPITSQGMFLCAVIRALHQHYTCKMHPQWISLITSTLPYM
GKVLRRVVASVTLQLCRNLDNLIQQYRYETGLSDSRPLWVALSIPPDMILTVLEGVTTII
QYCLLDPSAQYHQQLLVNVDQKHLSEARSGVLSVLHTIMSSVTLLWSVLHLVDTSERPAS
ASASSTTIINLGSTKNLRQQILELLGPISMNHGVHFMAAIAYVWNERKQGKNTTRNKVIP
TASEEQLVLVELVRSVSAMRTETVMQTVKEVLKQPPAIAKEKKHLSLEVCMLQFFYAYVQ
RIPVSNLVDSWSSLLALLKDSVQLGLPSPGQFLILGVLNEFILKNPNLENKKDQRDLQDV
THKVVEAIGTIAGSSLEQTTWLRRNLEVKASPQIVVDGATLEPDVEDLMLTVMEASSFTP
SVYSVHALTLLAEVLAHLLDMVFYSDEKERVIPLLVNIMHYVVPYLRNHSAHNAPSYRAC
VQLLSSLSGYQYTRRAWKKEAFDLFMDHTFFHMDSSCVSHWRAIMDHLMTHDKTTFRDLM
TRVAVAQSSSLNLFSNRDAELEQRAMLLKRLAFTIFSSEVDQYQKYLPDIQERLVESLRL
PQVPTLHAQVFLFFRVLLLRVSPQHLTSLWPTMITELVQVFLLMEQELTADEDISRTSGP
TVAGLETTYTGGNGFSTSYNSQRWLNLYLSACKFLDLALALPSESLPQFQMYRWAFIPEA
SDDSGLEVRRQGTHQREFKPYVVRLAKLLRKRAKKNPEEDCSGRALAWEPGHLLLTLYTI
RSMEQLLPFFNVLSQVFNCKVTSRAAGHSGSPVLYPNKDIKMETQKVFWSKARQEIEEVV
EKDFLEGVIKT
NT seq
7416 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagaggaattggagctgctggctgactccaagtacaggaactatgtagcagct
gtggacaaagcccttaaaaactttgagtactccagtgaatgggcagatttgatatctgct
ctggggaagctgaacaaggttttacataacaacgccaagtatcaggttgttcccaaaaag
ctcacaataggcaagcgtcttgcgcaatgtcttcacccagcgttgcccagtggagtccac
cgcaaggctctggagacctacgagatcattttcaaaatcatcggaccaaagcgactggcc
aaggatctctttctgtacagctctggactatttcctcttcttaccaatgctgccatgtct
gtgaaacctgcactgctctgcctgtatgaggtctactacctgcccttgggtaaaacactg
aagccaggattgcagggactgttaactggagttctgccaggtttggaagagggatcagaa
tactatgacagaaccaatgccttgctggagaaggtagctgcagctgtggagcagtctgct
ttctacagtgctctgtggggcagcatcctgaccagtcctgcagtcagattgccaggagtc
acattcgtgctctttcatctcaaccgaaagctttgcatggaagaccagctttacatcatc
ggcagtgacattgagctaatggttgaagcagtaagcacctcagtgcaggactccagtgtg
cttgtgcagaggagcacactggacctcatactgttctgttttccattccacatgagtcag
gcaactcgtactgatatgatccggatcctgtcggcagcattgcatgttgtactgcgcaga
gacatgtccctcaaccgccggctttatgcatggcttcttggcttcgacaacaactgtgtc
aaaataggccccaggagtacacggcacagtaaccctgaagaacatgccacatactatttc
aataccttctcgaaggacatgttggttcaggcaatggtggggattctgcaggggaaagca
gttggaggagaggaggagagtgtgctcatgcatgaccttaaacctttccgcatcttaatt
agtcttctggacaaaccagagctagggcctgccattttggaagatgtcctgattgaagta
ttcaggacgctgcattcacagtgcaaagctgaactggacttgcagacacagtctcctttc
tgtaaagaccacacacagttgagcagcaaactgcgggagaacaagaaaactgccgaactg
attaaaactgcaaaccttctattcaactcctttgagccgtactacatgtgggattatata
gcgcgctggtttgaggagtgttgcaggagaactctaaatgcaaggctgcaggctggacct
ggtggcatcagtgaagcatcagaactgtctctggtagaattctgtcagctggtcgacttc
ctcttggatatagtatccttgcctactagaagtatgagagtgatctgtcaggaaacatac
atcgaaatccagacagagcacctgccccagctgctgctgcggatggtctcagccctaacg
agccacctccaggcgctggggctggcggagctgacggactgcttgaggctctgctccaag
atcctcagtaaggtccagccacccttggtgtcacccgaagcggagggcagtttgccgttt
acagctgggcaacccagctctgccagagagaaggaagagaagaagagcatcccagtctgc
ctggaaaatgccagcgaggtctttgaggacagcgagaaccccccgagcagccgctcctct
gagagtggcttcacagagtttgtgcagtatcaagccaacaagagcgaggacttgaacagg
gctccgggtgagggccacggaatgccagatgctcagccagtgggcagcacctcctccgag
acggaaacagcctccactgtgggctccgaggacaccgtggtgcacccctcccccaccatg
gggcacccctcctcaagccacagcgggaagaccaagcagaagacagtcatgcagtgctgc
ctggagtacttccagcaattcctgacgcggctcatcgcgctgtatattaccccctgcacc
gccaccacgcccgccttcaccagcgagttcggtagtgtgctgaagggtgacaggcccggg
acgtggggcatggcactcagtgatgctgccagcactcggtccgctcaaagggagtgcgtg
ggtgccttcaccgctacctgccagctgttcctggagtgctccagcttccctgtttacatt
gctgagggcaaccttaagccctctcctcaggctgaagagtccacacaagacagcgaacaa
gtaaagccacctctgtggctccagaccctcatggatgcctgctgccttgccagtgagttt
agtatccaggctgttgcaatctctctggtaatggacctggtaggcctcacccagtccgtc
accatagtgacagaggaaaatgtaaacagtttggagacggcccagcccatgagtccgagt
caggggagggtggctgtggtgatcaggcctccacttacgcagggaatcctgagattcatt
gctgagaagactgcatttttcaagcatgttgcactgacattgtgggaccagctaggtgag
ggaaccccgcaacatcatcaaaggagtgtggagcttttctatcagctgcacaatctggtc
ccatcttccagcatctgtgaggatgttatcagccagcagctgatgcacagagacaagaaa
atccgcttggaagctcacgtgaagttttcagtactctggcacctgacaagggacctgaat
attaacaagtcttctccattcaaccgcacttttgacaggtccctgttcatcatgctggaa
agtctgagcagctgggacggttccacctgctccgttggccaggcctggctcaaacaggtg
cttcagagacacgacattgccagggtgctcgagcctctgctgctgctgctcctccacccc
aagacccaccgcgtgtcagtgcagagggtcaaggcagagcggcactggagcagagccagg
aatcatcctgccgaggaggaggcgggtgatggcggcgggtctaactacatgaaggagatc
agctatgctaacggcttcagccagatgcctgttgagaatttgaaggtgggagctttgaaa
gagtgcactaggaaagccttgagcctggacgagatggagccctttagcctgacagtgaat
ccctttagcgacagcctatccctgctcagcaccagcagtgagaacatccagttggccttc
gacctgccagaccagcagatggagatcctccagagctcggagtctgtcggctcccactcc
tctacaggagacagcactagcttagaggagcctgactatagcaatgctgcaggaacaccc
gaaaatgctccgtctgttctcatcgaagactctgtagaggctgtcatacaacaggtggtg
tttgaattggtggatagagtagcacaaaggctagaagaaggtcctgaaagtagggaagag
tggcatctggaagtctctgactccttcaaattggaggccagtttgtgcccacagccgctg
gattatctttttgagatgagcaaaaacaaaaatgctgccgttaaagaaaaagggccagag
tcggatagtaatggcactccagacttcctttctgtttcatcagagacgatagatgagggc
acacacgacagtatcgccaggcacagctcatcaccttccatcatcatgaacctagaggct
acccctacagagcctagccttccacttccagagcagcagtcccgcaagaggagccacagc
agcgtccagctgagcctgaaagggaagatcatggagaagctgaccgacaaatccccaggg
gccaagcccaaggtgaagagcagcaagaagaaagaggaagcaaggaagaaagcacaagcc
gagaaggccaagcagcccaacatcttcttcggggacagcttagacttggagaactggtac
agctgtggtgaaggggaggtttcggagatagagagtgatgtgggctcccctgaggtctgt
atgtcagcctcgcctgccaggtttaacatccaccctctctaccagcacctgctgctctac
ctgcaggtgtacgactcgtcccgtgctctgcatgccctctccgctctgtctgccatgctg
aaagccaaccctgttggatttgtcagtgccatctctaccaccagcgtcaacaacacctac
accccgcagctctccctcatgcaaaacctgctggcccgccaccgagtctctgttatgggc
aaggacttctactctaagatcccagtagactcccacagccatgtcttccgcagctccatg
ttcatcgagatcatcatctccctttgcctctacttcctgcgcagctattaccccaaccac
ttggcggcctccgagcaggacttgtcaggaaaccgcaacatgcagatcatgagcattgag
gtcctgactttgctcttcacagagctcaccaaggtcaccgaggcttcggccaaaggcttc
gccagcttcatctcggatgtgctgtccaagtgcaaggtgcagaaggtggtcctccactgc
ctgctttcctccatcttcagcgcacagaagtggcatgcagagaggacatccggtaagaac
gcggctgcctctgaagaaggcctatctgaggacagtatcatcaacttctgcgaggacgag
atagacaactgcagcacactccagtcacagctgctgcgccttctgcagagcctcatcatc
ttggagcaccgggtcctgggcctttccgaggagagtgaagccagctatgagttcgtcggc
acggatgcggagcacatcaacccacagcaacccctgacatccctgcagtacctgccctcc
cagcccatcacctcgcaaggcatgttcctctgcgcagtgataagagccctgcaccagcac
tacacctgcaaaatgcacccccaatggatcagcctcatcacctcgacgctgccgtacatg
gggaaagtgttgaggagggtggtggcttctgtgacactgcagctgtgccgtaacctggat
aacttaatacagcagtatagatatgagactggattatcagatagcaggcctttatgggtg
gcattaagcatccccccagatatgatcctcactgttttggagggagtgaccactattatt
caatactgccttttagacccatctgctcagtaccaccagcagctgttggtgaatgttgat
cagaagcacctgtcggaggcacgcagtggggtcctgtccgtcctgcacaccatcatgtcc
tcggtgacactcctgtggagtgtgttacacctggtggacacttcagagcgcccagcctct
gcctctgcatcgtccactaccatcatcaatctgggatccaccaagaatctgaggcagcag
attctcgagcttctgggacccatctccatgaaccatggggtgcactttatggcagccata
gcatacgtgtggaatgaaaggaaacaaggcaaaaacacgacccggaataaagtaattccc
acagctagtgaagaacagttggtgttagtggagctagtgcgctctgttagtgcaatgaga
acagaaacagtgatgcagactgtgaaagaggttttaaagcagccgccagctattgcaaag
gaaaagaaacatctctctctggaagtatgtatgctgcagtttttctatgcttatgtacaa
aggatacctgtgtcaaacctggtggacagctggtcatccctgctggctttactgaaagac
tctgtgcagcttgggctcccgtcacctggccagttccttatacttggagttctcaatgaa
ttcattttgaagaatcccaatttagaaaataagaaggaccagagagacctgcaggatgtt
acgcacaaagtagtggaagccattgggaccattgctggctcttccttggagcagactacc
tggctgaggagaaatctggaagtaaaggcatccccacagattgtggtagatggagccact
cttgaaccagatgttgaagatctcatgctcactgtgatggaggcttccagttttacacca
tctgtgtacagcgtgcatgcattgacattgctggctgaggtcctggctcacctgttggac
atggtgttttacagcgatgagaaggagagggttattcctttgttggttaacattatgcat
tacgtagtgccctacctccgcaaccacagtgcccataatgcacccagctaccgtgcctgt
gtgcagctgctaagcagccttagcggataccagtacaccaggagagcgtggaagaaggaa
gccttcgacctcttcatggaccacacattcttccacatggattcctcatgtgttagtcac
tggagagcgatcatggatcacctgatgacccacgacaaaaccacattccgagacttgatg
acgcgggttgccgtggcgcagagcagctccctcaatctgttttcaaaccgtgatgctgag
ctggagcagagagcaatgctcctcaagcgcctagccttcaccattttcagcagtgaggtg
gaccagtaccagaagtatcttccggacatccaggagaggctagtggagagtctgcgcttg
ccccaggtcccgacgctccatgcacaggtgttcctgttctttcgagtgcttctcctaaga
gtgtctccgcagcacctgacctccctgtggccaacgatgatcacagagctggtgcaagta
tttttactgatggaacaggaactcacagcagacgaagatatttcaaggacttctggccct
acggtggctgggttggaaacgacttatactgggggtaatggattctccacctcctacaac
agccagcgctggctcaacctctacctctccgcctgcaagttcctggacttggccctggct
ctaccttcggaaagcctgccacagttccagatgtatcgctgggctttcattccagaagca
tctgatgattctgggttggaggtccgtaggcaaggcactcaccaaagggaattcaagccc
tacgtcgttcgactagcaaaactgctaaggaagagggcaaagaaaaacccggaggaggac
tgttcagggagagccttggcctgggagccgggtcacttgctgctgacactctataccatc
cgcagcatggagcagctgctgcccttcttcaatgtgctcagccaggtgttcaattgcaag
gtgacgagcagggctgcaggacactcagggagcccggtgctgtaccccaacaaggacatc
aaaatggagacccagaaagtgttctggagcaaagctagacaggaaatagaggaagtggtc
gagaaggactttcttgaaggggtgataaaaacatga
DBGET
integrated database retrieval system
