Polyodon spathula (Mississippi paddlefish): 121317384
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Entry
121317384 CDS
T07273
Symbol
ube3d
Name
(RefSeq) E3 ubiquitin-protein ligase E3D
KO
K20803
ubiquitin-protein ligase E3 D [EC:
2.3.2.26
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121317384 (ube3d)
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121317384 (ube3d)
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
HECT type E3
121317384 (ube3d)
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Gene cluster
GFIT
Motif
Pfam:
HECT_2
Motif
Other DBs
NCBI-GeneID:
121317384
NCBI-ProteinID:
XP_041109192
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All DBs
Position
6:57317116..57345672
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AA seq
400 aa
AA seq
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MDDSNTQAEVFIELRKRLQSGHLVLSSGFAEDPSEVDISTGPSYVRIKAAKSCCYIDLPK
GVGITPPSCREMQRVSGDGLHIRLQLQNDNDMEVLPTLIESLKAQKSYLFVCQSCKETIL
MERVFRRVLPLPNGNWNALVDDWCCHPDPFANRKLLPRKDDCLLGDTFVLVNWGSGPNEA
LILEPKTADTDVSMENGGKDLIQKPNRNVIVICKCCRAMLGEVISSDTLKLYITEVTVKS
PTEDSENTSLQNRSLFVENVIACRIVEVSSSQSTFRFSVQGHDGKAYILLWLLNADTLLA
SSKTSVSCSAFTPSEDISYNKHKSYCASNVVKVLYLPCVKSNHKDIVDAWEKDIGVHSLP
LPVTTCHELLLLLSASTGSLPPSMRTMNTFQVAFLKLASN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggacgattccaatacccaggctgaagtcttcattgaactcaggaaaagactccagagc
ggacatttagttttaagcagtggctttgctgaagatccatctgaggtggacatttcaaca
ggaccatcatatgtacgaattaaggcagctaaaagttgctgttacatagatctaccaaaa
ggggtcggcattaccccaccgtcctgcagagaaatgcaaagggtttcaggggatggctta
cacattagattgcagcttcagaatgataatgacatggaagtcctccccactttgattgag
agtttgaaagctcagaagagttatttgtttgtctgccagtcctgcaaggaaactatccta
atggaacgggtgttccgcagagtgcttcctctaccaaatggaaactggaacgcgctggtt
gatgattggtgctgccacccagatccctttgccaacaggaagctgctcccgaggaaggac
gactgtttactgggggacacctttgttctagtgaactggggtagtggccctaatgaggca
ttgatactggaaccaaagactgctgacacagatgtcagcatggaaaatggtggcaaagat
ttaatccagaaaccaaacagaaatgtcatagtgatttgtaagtgttgcagggcaatgctt
ggagaagtaatttcgtcagatactctaaagctgtatataactgaggtgactgtgaaatct
cccactgaggactctgaaaacaccagtttgcaaaataggtctctgtttgtggaaaatgta
atagcctgccgaatagtggaagtctcctcctcccagagcacatttcgcttctcggttcaa
ggtcatgatggaaaagcttacattttgctgtggcttttaaatgctgacactctcctagcg
tcttcaaagacatctgtcagttgtagtgccttcaccccgtctgaagacatttcctacaac
aaacataaatcgtactgtgccagcaatgtcgttaaagttctgtaccttccttgcgtaaag
agcaaccacaaagatattgttgacgcctgggagaaggatattggggtgcattctttacct
cttccagtaacaacgtgccatgagttgttgcttttactctctgcaagcactgggtctctg
ccgccttcaatgcggaccatgaatacattccaggtagcgtttttgaagcttgcaagcaac
tga
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