Polyodon spathula (Mississippi paddlefish): 121317409
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Entry
121317409 CDS
T07273
Name
(RefSeq) uncharacterized protein LOC121317409 isoform X1
KO
K25509
beta/gamma crystallin domain-containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121317409
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121317409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crystall
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
121317409
NCBI-ProteinID:
XP_041109244
LinkDB
All DBs
Position
6:60041224..60113438
Genome browser
AA seq
2939 aa
AA seq
DB search
MNKQGGSKFKKFFHKSKSSENQPDSEGKLIKKQPSRPGDAEPKSPNAAKKKTFGSWRKKK
HPNEPSSPVGAGPGFTDETEDLDSRNISFDAISIRTENNLTLPKSPSDWEMDSHTTTPSA
TKSRKNRSPADDKNRVFDRLGTFFSSGRRRKSKGSSEVSEAATEEPAPFAEYTASPRQDE
REGIQRTEDLPESRAYAVTASGDQLENKDKSAHTVEVGSVKQAIKHREVTTHSSKLQSFE
KVIDFSQHSKSVRQGSSLNSSKSLVINVGTSTKLQTGGEQRVERNVKHLKTLPSRKGSAS
DSALEKTGSPGKDLHVYLEEISVSSATKGLPGQSVGKEFTRKSDIVSKVGSRCQEITQTK
EFGFQEPSSMKTSKDNQDLPPPELARESLLAPIEVSTAYHAVSQRSLCNAETPLARNEPE
SQRLRDSSEVKPQKETRALTAEVFLQPGGDCSPGRSAGEYPFAEAEEMIRKNRHSGDGRS
LKSPDSQQPVDEEPVCSTDNTFCDVSETKISAIMGNNVEVSEEALEARSTVLLNQEGRVE
SNVIKSPEMIKQQLPSLELPRKNRMAQHSPLSVFALPASKNTRSKECASTGITVQAGLQS
NMPAVSTTKNTQVGNANEAGHREDSRVAVSVVNAKSKPSEGEATTLSLESTNTPSEALHA
EKALSRKSSLQFKVTQGEAEYNRKDVKEVMKSEIKIPSNLKKVNVEVKSTESKLSEPGKL
KGRISMFENKATSFKEKEFCVTKNIAFYPKFSKKFTERTKLKINQPSECKLMEGGKKIDG
LNKSNEVEVWRNNQEDLQTAAEQPDYTENTVQSNTFNMNQASTEKASVDSTSLGASANVK
TTTVTSKSSSETEVIETKAPIVMKEELLSTVNPEAIVFFISNRSAPGTSSKCQSSEVVTV
ASGALSSVDEGKTKAPAKEEKMLAGDSIAMQQTTVITQSQEQVTQVKNKAATENTFIVQE
STEQLLPDAKQQRFTGIDTCRQQLGRSTAQNLNNSPSSAQPTAKQQLDLNNVPREEDTSA
VSQLNKIIQEKTDTKNKRLISVLDLNTVKQQSNDLVDAKIEFSASEKHTTAKQKTSSTVV
KTVSELPTSGQKSPIKEQSDISLQTGSKLPKPVKKSTSKQLSINDTVEQGASDSGQQMAT
EQQPERNFLKVEKDPHTSLQQNTTKPQPDNIIKTVSELSTSEQKSPVKDKSGNVLQTGSK
LPRPVEKGPSKQLSNYDTVNAASESVKLVQQDSTEQQSNSNILQTVKKLITSTQYDNVIK
AESELAMPGQKRASVKNSESSTLQMEKEFSAPVQQSAESTVVKTAGALPTTGEKSFIEIQ
SEVSIVRAEEYLPKSELKRSETLAEITSELTISGQKSYVAQHEKELNISVQETAIKVQSE
TATKKLSKSSIVQEEKVSKFVPDSTTKVQSDTSVVKITEELTTKGQESPAKKQSESNTVQ
AGKDLSKSLLNSTIKLQSENVVEATSELTTSGQKSSVKIQSEAGIAQKELTRTELESSAK
KQSERNIVQLGKDLPMSVQNVVEATSELTIPGQKTKKPSEYSVQQKEEELSTSEQQTKII
KVQSDGEVVKQIGELSGTGQESSKNLSESIMQTQKVLPRSEQNAVEATNSLTSSGQQHTV
QKQSEVVITQTESKLPVPEHEIYTTQQQSKSNVSCAEDKGPILVQQNAVKGQSESSVVKT
VNEPPTTKKESKEKKQFDSNTVHTGNGLPELVEQCTKEKKDLSLNATASAEYPNKFKSNK
TQNESAEKASLEQVQDSSNKEENKLPTSNITGEPLQNVQMESLSQPTSVTAIQSNTTKPQ
KSEKEATTSLTDITMSEFKNKKPLQYSDLNTGPEVLQNAAAVASATQYIVGAKCRLSSEI
VLKSPDQFNKRDTDVEQHFGQKEQNVENKLNTSESDDGVLDTSGDLESFVENIRNLGSTF
SFPQKRVKPLKSPAPPFAMPPIKEDRFEKTLDPDVFKFGLGKKEKSRETPSSTLFKLQSM
DTKSKFIPKRSSAEQSMLFKSHQSLSTNSVETQNPDISENESVDAVVRRSRLEKSSIVSS
LLSPSTTPRINLSATTSKALSTVLSRTETESELSQETKSTTSLFLPSTSSQLDLLTGTSQ
TPLLLNGIDGNIKEDAKPSFLTNDLLDPPSVEFPTPPFLDIKLPTIVDKYLKPDNTKTAL
VLENSFQMPEFKLPKFPKSGLEPSSDYNDNRFANRSQNFSGLYNPSLLGPQAFIPGMPTE
NMEIPISDQRRTHKRPGKLVIYDQPQFSGEANEIFRDVEDATSFKLSSVISVRVVRGCWI
FYEKPHFQGRSIALEEGQTELVNIWNEVACEENAAGESKPDTAAHMVIGSVRLAVKDYSV
PEIDLFTDPKGMGRKMTFFDDTLETYTYGIPVNTSSIKVHSGVWLLFEEPGFCGCSCILE
PGEYPCPESWGFQHPIVGSLRPLKMGGLKVEHPNEPKAIVYEKPFFEGKHLEIESDAFSF
NEGDDSEDCVTCWVKKLGSVGSVKILRGIWVGYEKPGFEGHQYLMEEGQFENWKDWGGYC
EQLQSLRPIIADFLAPHMKMYSEKDFGKKGHTIDLLGLVPNMEDTGFGQITQSAEVISGV
WVAFEGPGFSGQHYVLEKGMYSSFEDWGAQTFKLSSVQPIFLENIYGSKVKFRVQLFSEP
DFQGSSQTLEESASVLPEGISVKSCKVLTGSWVVYEEEMFGGKQYLVEEGNYPDLTAIGC
PSLNTCIKSVQILGFEFSEPYIMLFAKENFRGKKIVLKDMAANLQLLGFNAHIFSVQVGG
GMWVVYEQINYRGEQMLLAPSEIPSWHRYSGWHKIGSLRPVFQKQVFFKLRNRATGTLMS
VTGSLEDIKLSRIQAVEDTGAEDHIWSFREGLLRCKAVEDCCLETTGTIVIAGCRLGLSP
EPGKENHFWSISPDGLVRFRMRPDCVLEVKGGQQYDKNQVILNTFDENKQNQRWDMEIL
NT seq
8820 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcaaggaggctccaagtttaagaaatttttccacaagagcaaatcatcagaa
aaccaaccggacagtgagggtaaacttattaaaaagcaaccaagtcgtcctggtgatgca
gaacccaagagtccaaatgctgcgaaaaagaaaacatttggttcatggcgcaagaagaaa
catccaaacgaaccctcctcacctgtaggtgcaggaccgggttttacagatgagacggag
gacctggacagcagaaacatatcctttgatgcaataagtataagaacagaaaacaattta
acattacccaaaagtccatcagactgggaaatggattctcacacaactacaccctctgca
actaaatctagaaagaatcgctctccagcagatgataaaaacagagtttttgaccgactt
gggacatttttcagttccggcaggagaagaaaaagcaaagggtcatctgaagtttcagag
gctgcaactgaagaacctgctccatttgcggaatacacagcctcccccaggcaggatgag
agagaggggatccagagaacagaagatttgcctgagtctcgggcttacgcagtgacagct
tctggggaccaactcgaaaacaaagacaaatctgcacatactgtagaagtagggtctgta
aagcaggccattaaacacagagaggtcaccacacacagtagtaaactacagagttttgaa
aaggtcattgacttttcacagcattctaaatcagttcgccagggttcatccctgaacagc
tcaaagagccttgtgattaacgtgggtacttcaacaaagcttcagacaggaggagaacag
agggtcgaaaggaatgtgaaacatttgaaaaccttgccttccaggaaggggtctgcttca
gattctgctttggaaaagacaggaagcccaggcaaggaccttcatgtgtatttggaagaa
ataagtgtgagtagtgccaccaaaggtttaccaggccaatctgtaggaaaagaattcaca
aggaagtctgatattgtttcaaaagttggctcaagatgccaagaaattacacagacaaag
gagttcggatttcaagagccctccagcatgaagacatccaaggataaccaggacttgcct
ccacctgagctcgctagggagagtctgctggcacccatagaagtatccactgcatatcat
gcagtaagtcaacgcagtttatgtaatgctgaaacacctttagcaagaaatgaaccagaa
tcacaaagacttagagattcttcagaagtcaaaccacagaaagaaacaagggctctcact
gctgaagtattcctacagcctggtggagactgtagccctggccgctcagctggagaatat
ccttttgcggaagctgaagaaatgataagaaagaatagacacagtggggatggaaggtca
ctgaaatcacctgacagtcagcagcctgttgatgaggaaccagtatgcagcacagataat
accttctgtgatgtctcagaaacgaagatcagtgctatcatgggaaataatgttgaggtt
tctgaggaagcacttgaagcaagaagcacagtcttgcttaatcaagagggaagggtggaa
agtaatgtaatcaaatcaccagaaatgattaagcagcaactcccaagccttgagcttccc
aggaaaaatagaatggctcaacactcacctctgtcagtgtttgctttacctgcttcaaag
aatactcggagcaaagagtgtgcatcaacaggcatcacagtgcaggctggacttcaaagc
aacatgccagctgtatctacaacaaaaaacacacaggtgggaaatgcaaacgaggctgga
caccgggaagacagtcgggttgcagtcagtgttgtgaatgctaaaagtaagccctcagag
ggagaagcaacaacactttcattggaatccaccaacacaccttctgaagcacttcacgca
gagaaggctttatccagaaaatctagtttgcaatttaaagtcactcagggtgaagctgaa
tacaatagaaaggatgtgaaagaggtgatgaaatctgaaatcaaaataccatctaatctc
aaaaaagtcaatgtagaagttaaatcaacagagtctaaattatcagagcctggcaagctt
aaaggccggatcagcatgtttgaaaataaagcaacaagtttcaaggaaaaagaattttgt
gtcacaaaaaacattgcattctatccaaaattctctaaaaaatttactgaaagaacaaaa
ctgaaaattaatcagccatctgaatgcaagctaatggaagggggaaaaaagattgatggt
ctgaataaaagtaatgaagtggaggtatggagaaataatcaagaggatctgcagacagca
gcagagcagccagactacactgagaacactgtccagtctaatacatttaatatgaatcag
gcatccactgagaaggcttctgttgactctacttccctgggagcttcagcgaatgtcaag
accactactgtgacatcaaagagttcttcagaaacagaggttatagaaactaaagcaccc
attgtcatgaaagaagaacttctttctacagttaatccagaagccattgtcttttttatt
tcaaacagatcagcacctgggacttcatccaaatgtcaatcatcagaagtagtgacagtg
gctagtggggcgttgtcctctgttgatgaaggtaaaacaaaggcaccagctaaagaagaa
aaaatgttagctggagatagcatagctatgcagcaaactacagtaattacccaaagtcaa
gaacaggttacacaggtaaaaaataaagctgcaactgaaaatactttcattgtgcaggaa
agtactgaacaactcctacctgatgccaaacagcaaagatttactggaattgatacctgt
agacagcaacttggcagaagtacggcacaaaaccttaataactcgcccagttctgcacag
ccaactgcaaaacaacaattagatttgaataatgtaccaagagaagaggacacctctgca
gtttcacagctaaataaaataattcaagaaaaaactgatacaaaaaacaaacgtcttata
tctgtacttgatttaaacaccgttaagcaacagtctaatgatcttgttgatgcaaaaatt
gaattttctgcctcagaaaagcacaccacagctaagcaaaaaacttccagtactgtagtg
aagacagtaagtgaattgcctacatccggacagaagagtccaattaaggaacaatctgat
attagtttgcagacgggaagcaaactgccaaaacctgttaaaaaaagtacctctaagcag
ctgtctatcaatgatactgtggaacaaggagccagtgattctggtcagcaaatggctact
gagcaacaacctgagaggaactttttaaaagtggaaaaagatccccatacttccttacag
caaaacaccaccaagccacaaccagacaatattataaagacagtaagtgaactgtctacg
tcggaacagaagagtcctgttaaggacaaatctggtaatgttttacaaactggaagcaaa
ctgcctagacctgttgagaaaggcccctccaagcagctgtctaattatgatactgttaat
gcagcaagtgaatcggtgaaattggttcagcaagatagcactgagcagcagtccaacagt
aacattttacaaacagtgaagaaactgattaccagtacacaatatgataatgttataaaa
gcagaaagtgaattggctatgcctgggcagaaaagagcatcagtgaaaaattctgaaagt
agtactttgcaaatggaaaaggagtttagtgcacctgtacagcaatctgcagaaagcact
gttgtaaaaacagcaggtgcattgccaacaactggagagaagagctttattgagatacag
tctgaagttagcattgtacgggcagaagaatacttaccaaaatctgagctgaagaggtct
gagactcttgcagaaataacaagtgaattgaccatatctggacagaaaagttatgttgca
caacatgagaaagagttgaatatatctgtacaggaaactgcaatcaaagtacagtctgag
actgctacaaagaaactgtctaaaagtagtattgtacaagaagaaaaggtatctaaattt
gtgccggacagcaccacaaaggtacaatctgacaccagcgttgtaaaaataacagaagaa
ttgactacaaaaggacaggagagtcctgcaaagaaacagtctgaaagtaacactgtacaa
gcaggaaaagacttgtctaaatctttgctgaatagcactatcaaattacagtctgagaac
gttgtagaagcaactagtgaattgactacatctggacaaaaaagttctgttaagatacag
tctgaggctggcattgcacaaaaggaattaaccaggactgaactggaaagttctgctaag
aaacaatctgaaagaaatattgtacaattgggaaaagacttgcctatgtctgtccagaat
gttgttgaagcaacaagtgaattgactatacctggacaaaaaactaagaagccatctgag
tatagtgttcagcaaaaggaagaagagttgagtacatctgaacagcaaactaaaatcatc
aaagtacaatctgacggtgaggttgtaaaacaaattggtgaattgtctgggactggacag
gagagctctaagaatctgtctgaaagtattatgcaaacacaaaaagtcttgcctagatct
gagcagaatgctgtagaagcaacaaacagtttgacttcatctggacaacaacatactgtt
cagaaacaatcagaggttgttattacacagactgaaagcaaattgcctgtacctgaacat
gaaatttatacaacccaacagcaatccaaaagtaacgtttcatgtgcagaagacaaaggg
cctatcttggtgcaacaaaatgctgtcaaggggcagtctgagagcagtgttgtgaaaaca
gtaaatgagccacctacaactaaaaaggaaagtaaagagaagaaacagtttgacagtaac
actgtgcacactggcaatggtttgccagaattggtagaacagtgcacaaaagaaaagaaa
gatttgtctttgaatgccacagcttcagcagaatatccaaacaaattcaagtctaataaa
acccagaatgagtcagcagaaaaagcatctttagaacaggtgcaagacagttccaataaa
gaagagaacaagctcccaacatcaaacatcacaggagagcctttacaaaatgttcagatg
gaaagcctatcacaacccacttctgttacagctatacaaagcaatacaaccaaaccacaa
aaaagtgaaaaagaagccacaacatcattaacagatattactatgtcagagtttaagaat
aaaaaacctttacagtacagtgacttgaatacaggtccagaagttctgcagaacgcagca
gcagtagcatcagcaacccagtatattgtgggggcaaagtgtcgattgtcctctgagatt
gtactgaaaagtccagatcaattcaataagagagacacagatgttgaacagcattttgga
caaaaagagcaaaatgtagaaaataagctaaatacctctgaaagtgatgatggtgtcttg
gacacatcaggtgatttagagagttttgtagaaaacatcaggaacttgggcagcacgttt
tcttttccacagaagagggtaaagcctcttaaatcaccagcaccaccctttgccatgcca
cccatcaaggaagaccggtttgagaaaactcttgatccagatgtcttcaagtttggttta
gggaaaaaagaaaaatcaagagagacaccctcatcaacactgttcaagctgcaaagcatg
gacacaaaaagcaagttcatccccaaacgatcaagtgcagaacagagtatgctgttcaaa
tcacaccagtcgctaagcacgaacagtgtggaaactcagaatccagacatctccgagaat
gagtctgtagatgctgttgtcagaaggtcacgtcttgagaaaagctctattgtttcaagc
ctgcttagtccatcaacaacaccacggataaatctgtctgcaacaacaagtaaagctctt
agtactgtgctttcacgtactgaaaccgaatcagagttatctcaagaaactaagagcaca
acttctctgttcttgccctccacttcatcacaacttgatttgcttacaggcacatcccag
actcccttattgctaaatggaatagatggaaatataaaagaagatgctaaaccatcattt
ttgacaaatgacttgcttgatccaccttcagttgagttcccaaccccaccatttttggat
attaaattgccaactattgtggacaaatacctgaaaccagacaacacaaaaacagcacta
gttctggaaaatagcttccaaatgccagagttcaaacttcctaaatttcctaagtcaggg
ctggagcccagcagtgactataatgacaacaggtttgccaacaggagccagaatttctca
ggattatataaccccagcctacttggacctcaggcctttatccctggaatgccaactgaa
aacatggagattcctatttcagaccagagaaggacccacaagagacctgggaagctggta
atttatgatcaaccccagttctcaggggaagctaatgaaatcttcagagacgtagaagat
gccacttcatttaaattatcgtctgtcatttctgtaagggtggtaagaggatgctggatt
ttctatgaaaagccgcactttcaaggccggtcaatagctttggaagaggggcagacagag
ctggtaaatatctggaatgaagtggcctgtgaagagaatgctgctggtgagagcaagcct
gacactgcagctcatatggtgatcggctccgttaggctagcagtaaaggattacagtgta
cctgagattgacctgttcactgaccccaaaggcatgggaagaaagatgaccttctttgat
gatacgttggagacatacacatatggaataccagtaaacacgtcatctatcaaagtccat
tctggagtttggcttctttttgaagagcctggtttctgtggatgttcctgtatcttggag
ccaggagaatacccctgcccagagtcctggggctttcagcatcctatagtcggatcactt
aggccactgaaaatgggtggactgaaggtagagcatcctaatgagcccaaggctattgtt
tatgagaagccattttttgaagggaagcatttggagattgaaagtgatgcttttagcttc
aatgaaggtgatgacagtgaagattgcgtcacctgttgggtaaagaaattgggatctgtt
ggctcagttaaaatcctgcgaggcatctgggtgggatatgagaagccaggtttcgaaggg
catcagtatttgatggaggaaggacagtttgaaaattggaaagactggggtggttactgt
gagcagctccaatctttacgacccataatcgcagactttttggctccacacatgaagatg
tacagtgagaaggattttggtaaaaagggtcacaccattgacttgctggggctggttcca
aacatggaagacacaggctttggtcaaattacacagtctgccgaagtaattagtggtgta
tgggttgcttttgagggtcctggtttttctgggcaacactatgtcctggaaaaaggaatg
tacagtagctttgaggactggggagcccaaaccttcaagctctcctctgttcagcccata
tttctggagaacatatatggatcgaaggtgaaatttcgggttcaattgttctcggagcct
gatttccaaggtagcagtcagacactggaagaaagtgcgtcagtgcttcctgaaggaatc
tctgtgaagtcatgcaaggttttgactggcagctgggtggtatacgaagaggagatgttc
ggggggaaacaatatttggtggaagaaggaaattaccctgacctgactgcaattggctgt
cccagtctgaacacatgcatcaaatctgtacagattctaggttttgaattttctgagcca
tacattatgctttttgcaaaagaaaacttcagagggaagaaaattgttctaaaggacatg
gctgccaacctacagttactggggttcaatgcccacatcttctctgtgcaagtgggtgga
ggaatgtgggttgtttatgaacagattaattatagaggagagcagatgttactggcacca
agtgaaataccatcctggcacagatacagtgggtggcacaagataggctccttacggcct
gtgtttcagaaacaagtattctttaaacttcggaacagggcaacaggcaccctcatgtca
gtgacaggcagtctggaggatattaaactgtcaagaatccaggctgtggaagatactgga
gctgaggaccacatctggtctttccgagaaggactgctcagatgcaaggcggtagaggac
tgttgtttagaaactacaggaaccattgtgatagctggttgccgactaggcctgtcacca
gagccaggaaaagagaatcatttctggagcatcagtcctgatggtttagtaagatttagg
atgagaccggattgtgttttggaagtaaaaggaggtcaacaatatgataaaaaccaagtg
atcttaaatacgtttgatgaaaacaaacagaatcagagatgggatatggaaatcctgtaa
DBGET
integrated database retrieval system
